Lep-MAP3 Discussion

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Topic	Posts	Views	Last Post
Difference between recombination2=0 and informativeMask=1 By Eric Gonzalez on Wed Apr 02, 2025 05:29 AM	11	104	By Eric Gonzalez on Thu Jul 17, 2025 08:52 PM
format of the usePhysical file By Angus Davison on Mon Jul 07, 2025 09:38 AM	2	16	By Pasi Rastas on Mon Jul 07, 2025 12:56 PM
Pedigree file for selfing individuals By hfan on Fri May 09, 2025 02:15 AM	16	139	By hfan on Tue Jul 01, 2025 03:50 AM
Two new Linkage Groups after running JoinSingles2All By Matt Wersebe on Mon Jan 18, 2021 03:48 PM	4	249	By hfan on Tue May 20, 2025 03:21 AM
one parent miss position with 0.000 value in partial chromosomes By Cheng Chen on Thu Apr 17, 2025 03:38 AM	4	71	By Pasi Rastas on Mon May 05, 2025 09:00 AM
Parallel lines in multi-family data By Lorenzo on Mon Apr 14, 2025 01:54 AM	2	42	By Pasi Rastas on Tue Apr 15, 2025 12:21 PM
Consensus map By Yutang Chen on Wed Apr 02, 2025 08:27 AM	5	53	By Yutang Chen on Fri Apr 11, 2025 12:34 PM
Meaning of the 0 0 values at the end of phased data lines in OrderM... By Jessica Hintzsche on Tue Apr 08, 2025 03:32 AM	2	47	By Pasi Rastas on Wed Apr 09, 2025 08:24 AM
diploid parents and haploid full-sib offspring By Brandon on Thu Jan 16, 2025 02:06 PM	16	186	By Pasi Rastas on Tue Apr 01, 2025 08:44 PM
Merge LG By Eric Gonzalez on Wed Mar 26, 2025 01:10 AM	6	117	By Eric Gonzalez on Thu Mar 27, 2025 09:56 PM
likelihood value By 康明明 on Thu Mar 06, 2025 12:18 PM	8	130	By Pasi Rastas on Wed Mar 19, 2025 09:09 AM
Creating Pedigree Files with F2 Generation Population By 康明明 on Tue Mar 04, 2025 12:33 PM	2	66	By 康明明 on Tue Mar 04, 2025 01:20 PM
How to creat pedigree file for crosses with multiple parents By chenli on Thu Jun 20, 2019 09:47 AM	8	404	By Afewerki Yohannes Kiros on Thu Feb 27, 2025 09:48 PM
FitStepFunction for monotonically increasing maps By Catherine on Fri Feb 21, 2025 02:01 PM	4	49	By Catherine on Tue Feb 25, 2025 01:47 PM
Questions on Pedigree File Format, Marker Inheritance, and Phenotype ... By Bin Hirota on Tue Dec 17, 2024 08:20 AM	6	116	By Bin Hirota on Mon Jan 06, 2025 02:53 AM
"Sex" map distance differences in hemaphroditic F2 cross By Daniel P Wood on Fri Jan 21, 2022 04:04 PM	3	480	By Daniel P Wood on Mon Jan 24, 2022 09:16 AM
Recombination map with complex pedigrees from natural populations of ... By Dario Galanti on Mon Nov 18, 2024 12:34 PM	3	96	By Pasi Rastas on Tue Dec 03, 2024 07:59 AM
About sex average map. By Kun on Wed Nov 18, 2020 02:53 AM	3	378	By Kun on Thu Nov 19, 2020 01:39 AM
Error: Same individual is twice in the data IBD command By Théo on Fri Nov 15, 2024 02:57 PM	3	98	By Pasi Rastas on Tue Nov 19, 2024 01:17 PM
Nucleotide Code Conversion in LepMap3 By Qiuni Yang on Wed Oct 30, 2024 10:06 PM	3	92	By Qiuni Yang on Mon Nov 04, 2024 04:11 PM
Pedigree in haploids with maternal diploid information By Xochitl Granados on Wed Sep 11, 2024 07:11 PM	4	69	By Pasi Rastas on Fri Sep 13, 2024 07:35 AM
Mapping with hermaphrodites (known parents but unknown if sperm or eg... By Nicolas on Sun Jun 30, 2024 01:54 PM	4	141	By Nicolas on Wed Aug 07, 2024 01:27 PM
"removeNonInformative" argument and Chromosome anchoring issue By Faridul Islam on Wed Jul 03, 2024 05:03 PM	4	140	By Pasi Rastas on Fri Aug 02, 2024 09:53 AM
Compute genetic map based on known physical order By Faridul Islam on Tue May 28, 2024 01:44 PM	11	506	By Pasi Rastas on Fri Jun 28, 2024 02:19 PM
The number of LGs By Dave on Sat May 18, 2024 04:52 PM	2	152	By Pasi Rastas on Tue May 21, 2024 08:43 AM

1 2 3 .. 11 > >> (Page 1 of 11)

Lep-MAP3 Discussion

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General Discussion

Difference between recombination2=0 and informativeMask=1

format of the usePhysical file

Pedigree file for selfing individuals

Two new Linkage Groups after running JoinSingles2All

one parent miss position with 0.000 value in partial chromosomes

Parallel lines in multi-family data

Consensus map

Meaning of the 0 0 values at the end of phased data lines in OrderM...

diploid parents and haploid full-sib offspring

Merge LG

likelihood value

Creating Pedigree Files with F2 Generation Population

How to creat pedigree file for crosses with multiple parents

FitStepFunction for monotonically increasing maps

Questions on Pedigree File Format, Marker Inheritance, and Phenotype ...

"Sex" map distance differences in hemaphroditic F2 cross

Recombination map with complex pedigrees from natural populations of ...

About sex average map.

Error: Same individual is twice in the data IBD command

Nucleotide Code Conversion in LepMap3

Pedigree in haploids with maternal diploid information

Mapping with hermaphrodites (known parents but unknown if sperm or eg...

"removeNonInformative" argument and Chromosome anchoring issue

Compute genetic map based on known physical order

The number of LGs

Lep-MAP3 Discussion

Forums

Help

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General Discussion