3D graphics, mixed rendering, hiding and showing parts of molecules, hydrogen bonds... was Re: [Jmol-users] (no subject)

[<chr...@ph...>]

sorry - forgot the subject before :>

chris harwell





Chris Harwell/PH/Novartis@PH
Sent by: jmo...@li...
10/10/2003 11:53 AM

 
        To:     <jmo...@li...>
        cc: 
        Subject:        [Jmol-users] (no subject)


Hi,

I was using Jmol in a web page and recommended it to a colleague as an 
alternative  to accelrys ds/weblab viewer or chime as a tool to 
communicate the results of docking calculations to synthetic chemists. 

He had these questions:

Does Jmol use proper 3D graphics? The last time I saw it, it looked like 
Xmol - good for publications but bad when you want to impress the 
chemists. It would require several extensions: mixed rendering, hiding and 

showing molecules or parts of molecules, adding lines to indicate e.g. 
hydrogen bonds, and of course surfaces.

Could anyone answer/address those please? I thought I saw something about 
upcoming 3D graphics. I am not aware of the other features, but thought 
maybe someone on the list would be.

thanks,

chris harwell



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