Iris Calliope

updated caiman-calliope interface scripts (esp added conversion of rois and activities to ROIs format)

do not save now the intermediate matrix to the hard drive during the min1pipe neural enhancing

first commit of min1pipe ( https://github.com/JinghaoLu/MIN1PIPE ), min1pipe_interface (scripts to interact with min1pipe from calliope) and caiman_interface

added the ability to recognize miniscope avi files as stacks

added plugins

clean up from rig3 ana

changed siteID and animalID variables in proj_meta to siteNbr and animalNbr to avoid confusion

fixed load bug - on first import of cascade the cd needs to be the dir of cascade.py

fixed bug when loading old Adata files - added automatic conversion to cell for dx dy ROIs and template