Sorry, I had lost track of that. When the first update with Python3.x variants #4395 was rejected for already being in fink, nonetheless only the py27 version was adopted in the stable tree.
I have just submitted a new Sphinx update with py34 and py35 versions in #4723.
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
pytables-py27 fails with this error. py34 and py35 fail similarly
writing output... [ 77%] usersguide/introduction
Exception occurred:
File "/sw/lib/python2.7/site-packages/docutils/writers/_html_base.py", line 671, in depart_document
assert not self.context, 'len(context) = %s' % len(self.context)
AssertionError: len(context) = 1
The full traceback has been saved in /private/tmp/sphinx-err-uiTE0E.log, if you want to report the issue to the developers.
This is the output from the error log cited:
$ sudo cat /private/tmp/sphinx-err-uiTE0E.log
Password:
# Sphinx version: 1.4.8# Python version: 2.7.14 (CPython)# Docutils version: 0.13.1 release# Jinja2 version: 2.8# Last messages:# writing output... [ 65%] release-notes/RELEASE_NOTES_v3.2.x# writing output... [ 66%] release_notes# writing output... [ 68%] usersguide/bibliography# writing output... [ 69%] usersguide/condition_syntax# writing output... [ 70%] usersguide/datatypes# writing output... [ 72%] usersguide/file_format# writing output... [ 73%] usersguide/filenode# writing output... [ 75%] usersguide/index# writing output... [ 76%] usersguide/installation# writing output... [ 77%] usersguide/introduction# Loaded extensions:# sphinx.ext.graphviz (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/graphviz.pyc# sphinx.ext.autodoc (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/autodoc.pyc# sphinx.ext.inheritance_diagram (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/inheritance_diagram.pyc# sphinx.ext.extlinks (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/extlinks.pyc# sphinx.ext.doctest (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/doctest.pyc# numpydoc (unknown version) from /sw/build.build/pytables-py27-3.2.3.1-4/PyTables-v.3.2.3.1/doc/sphinxext/numpydoc.py# sphinx.ext.viewcode (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/viewcode.pyc# sphinx.ext.pngmath (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/pngmath.pyc# alabaster (0.7.9) from /sw/lib/python2.7/site-packages/alabaster/__init__.pyc# ipython_console_highlighting (unknown version) from /sw/build.build/pytables-py27-3.2.3.1-4/PyTables-v.3.2.3.1/doc/sphinxext/ipython_console_highlighting.py# sphinx.ext.autosummary (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/autosummary/__init__.pyc# sphinx.ext.todo (1.4.8) from /sw/lib/python2.7/site-packages/sphinx/ext/todo.pyc
Traceback (most recent call last):
File "/sw/lib/python2.7/site-packages/sphinx/cmdline.py", line 244, in main
app.build(opts.force_all, filenames)
File "/sw/lib/python2.7/site-packages/sphinx/application.py", line 297, in build
self.builder.build_update()
File "/sw/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 251, in build_update
'out of date' % len(to_build))
File "/sw/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 322, in build
self.write(docnames, list(updated_docnames), method)
File "/sw/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 360, in write
self._write_serial(sorted(docnames), warnings)
File "/sw/lib/python2.7/site-packages/sphinx/builders/__init__.py", line 368, in _write_serial
self.write_doc(docname, doctree)
File "/sw/lib/python2.7/site-packages/sphinx/builders/html.py", line 448, in write_doc
self.docwriter.write(doctree, destination)
File "/sw/lib/python2.7/site-packages/docutils/writers/__init__.py", line 80, in write
self.translate()
File "/sw/lib/python2.7/site-packages/sphinx/writers/html.py", line 47, in translate
self.document.walkabout(visitor)
File "/sw/lib/python2.7/site-packages/docutils/nodes.py", line 187, in walkabout
visitor.dispatch_departure(self)
File "/sw/lib/python2.7/site-packages/docutils/nodes.py", line 1895, in dispatch_departure
return method(node)
File "/sw/lib/python2.7/site-packages/docutils/writers/_html_base.py", line 671, in depart_document
assert not self.context, 'len(context) = %s' % len(self.context)
AssertionError: len(context)=1
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
Confirmed, the doc build requires a newer Sphinx version; in particular the now current upstream needs an additional module numpydoc. Two options:
build the current version with docbuild disabled (files attached) or
wait for a Sphinx update (I have a local 1.6.5 I could submit).
All py36 dependencies should now be present in git. Should I fix the mock-py and six-py situation as described and commit? Then look at getting numpydoc installed and sphinx updated and then come back here to re-enable docs? I have some questions on sphinx, so it might be easier to move this forward as is.
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:
Currently, only sphinx-py27 exists, and it's at version 1.2.3-1.
Sorry, I had lost track of that. When the first update with Python3.x variants #4395 was rejected for already being in fink, nonetheless only the py27 version was adopted in the stable tree.
I have just submitted a new Sphinx update with py34 and py35 versions in #4723.
pytables-py27 fails with this error. py34 and py35 fail similarly
writing output... [ 77%] usersguide/introduction Exception occurred: File "/sw/lib/python2.7/site-packages/docutils/writers/_html_base.py", line 671, in depart_document assert not self.context, 'len(context) = %s' % len(self.context) AssertionError: len(context) = 1 The full traceback has been saved in /private/tmp/sphinx-err-uiTE0E.log, if you want to report the issue to the developers.This is the output from the error log cited:
Confirmed, the doc build requires a newer Sphinx version; in particular the now current upstream needs an additional module
numpydoc. Two options:build the current version with docbuild disabled (files attached) or
wait for a Sphinx update (I have a local 1.6.5 I could submit).
This builds w/ 2 caveats:
I can commit the latest version with those changes, and then add py36 when the dependencies become available.
Ping.
All py36 dependencies should now be present in git. Should I fix the mock-py and six-py situation as described and commit? Then look at getting numpydoc installed and sphinx updated and then come back here to re-enable docs? I have some questions on sphinx, so it might be easier to move this forward as is.
Sphinx has come a bit closer to an update, but yes, commiting with
BuildDepends- sphinx andDepends+ mock-py, six-py would be fine for now.