Re: [Fink-beginners] Fink install saga

[Marta R. <mar...@ya...>]

Thanks.
I’ve done ‘fink selfupdate’ and then ‘fink configure’. I think that I’ve resolved but when I’ve done ‘fink install saga’, I’ve received this error: 


fink install saga
Password:
Scanning package description files..........
Information about 9025 packages read in 1 seconds.
The following package will be installed or updated:
 saga
The following additional package will be installed:
 saga-shlibs
Default answer will be chosen in 60 seconds...
Do you want to continue? [Y/n] Y
Setting runtime build-lock...
dpkg-deb -b /w2/src/fink.build/root-fink-buildlock-saga-2.1.4-2 /w2/src/fink.build
dpkg-deb: costruisco il pacchetto `fink-buildlock-saga-2.1.4-2' in `/w2/src/fink.build/fink-buildlock-saga-2.1.4-2_2016.02.23-17.53.56_darwin-x86_64.deb'.
Installing build-lock package...
/w2/bin/dpkg-lockwait -i /w2/src/fink.build/fink-buildlock-saga-2.1.4-2_2016.02.23-17.53.56_darwin-x86_64.deb
Selecting previously deselected package fink-buildlock-saga-2.1.4-2.
(Reading database ... 225884 files and directories currently installed.)
Unpacking fink-buildlock-saga-2.1.4-2 (from .../fink-buildlock-saga-2.1.4-2_2016.02.23-17.53.56_darwin-x86_64.deb) ...
Setting up fink-buildlock-saga-2.1.4-2 (2016.02.23-17.53.56) ...

sudo -u fink-bld [ENV] sh -c /tmp/fink.OkJSh
env LANG=C LC_ALL=C /w2/bin/tar  --no-same-owner --no-same-permissions -xf /w2/src/saga_2.1.4.tar.gz
sudo -u fink-bld [ENV] sh -c /tmp/fink.ELBXq
/bin/cp /w2/src/create_saga_app.sh .
sudo -u fink-bld [ENV] sh -c /tmp/fink.8UM68
/bin/cp /w2/src/saga_gui.icns .
sudo -u fink-bld [ENV] sh -c /tmp/fink.pi00Q
perl -pi -e 's/(AM_INIT_AUTOMAKE)\((.*)\)/\1([\2 subdir-objects])/' configure.ac
perl -pi -e 's/-ldconfig//' src/saga_core/saga_api/Makefile.am
sudo -u fink-bld [ENV] sh -c /tmp/fink.kuzwt
/tmp/fink.SoxkS
#!/bin/bash -ev
  autoreconf -i
libtoolize: putting auxiliary files in '.'.
libtoolize: copying file './ltmain.sh'
libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'.
libtoolize: copying file 'm4/libtool.m4'
libtoolize: copying file 'm4/ltoptions.m4'
libtoolize: copying file 'm4/ltversion.m4'
  ./configure --prefix=/w2 --enable-gui --enable-odbc --disable-python
checking for a BSD-compatible install... /w2/bin/ginstall -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /w2/bin/gmkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking whether UID '600' is supported by ustar format... yes
checking whether GID '600' is supported by ustar format... yes
checking how to create a ustar tar archive... gnutar
checking for g++... g++
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ accepts -g... yes
checking for style of include used by make... GNU
checking dependency style of g++... gcc3
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... gcc3
checking build system type... x86_64-apple-darwin15.3.0
checking host system type... x86_64-apple-darwin15.3.0
checking how to print strings... printf
checking for a sed that does not truncate output... /w2/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 196608
checking how to convert x86_64-apple-darwin15.3.0 file names to x86_64-apple-darwin15.3.0 format... func_convert_file_noop
checking how to convert x86_64-apple-darwin15.3.0 file names to toolchain format... func_convert_file_noop
checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for ar... ar
checking for archiver @FILE support... no
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from gcc object... ok
checking for sysroot... no
checking for a working dd... /bin/dd
checking how to truncate binary pipes... /bin/dd bs=4096 count=1
checking for mt... no
checking if : is a manifest tool... no
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for -force_load linker flag... yes
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... yes
checking for gcc option to produce PIC... -fno-common -DPIC
checking if gcc PIC flag -fno-common -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin15.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking how to run the C++ preprocessor... g++ -E
checking for ld used by g++... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking for g++ option to produce PIC... -fno-common -DPIC
checking if g++ PIC flag -fno-common -DPIC works... yes
checking if g++ static flag -static works... no
checking if g++ supports -c -o file.o... yes
checking if g++ supports -c -o file.o... (cached) yes
checking whether the g++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin15.3.0 dyld
checking how to hardcode library paths into programs... immediate
checking for cvGetRows in -lcv... no
checking for Set_Mercator_Coordinates in -lgeotrans... no
checking for fftw_execute in -lfftw3... yes
checking for jas_calloc in -ljasper... yes
checking for LAS_GetVersion in -llas... no
checking for HPDF_Pages_New in -lhpdf... yes
checking for SQLFetch in -lodbc... yes
checking for pj_is_latlong in -lproj... yes
checking for VIGRA_RGBE_ReadPixels_Raw in -lvigraimpex... yes
checking for omp_get_num_threads in -lgomp... no
checking for ANSI C header files... (cached) yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking malloc.h usability... no
checking malloc.h presence... no
checking for malloc.h... no
checking for memory.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for unistd.h... (cached) yes
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for an ANSI C-conforming const... yes
checking for inline... inline
checking for size_t... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking whether byte ordering is bigendian... no
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for working memcmp... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking whether lstat correctly handles trailing slash... no
checking whether stat accepts an empty string... no
checking for working strtod... yes
checking for vprintf... yes
checking for _doprnt... no
checking for floor... yes
checking for memmove... yes
checking for memset... yes
checking for modf... yes
checking for pow... yes
checking for sqrt... yes
checking for strchr... yes
checking for strdup... yes
checking for strerror... yes
checking for strrchr... yes
checking for strstr... yes
checking for strtol... yes
checking for local include/lib path... none
./configure: line 17542: wx-config: command not found
configure: error: SAGA requires a unicode build of wxGTK
### execution of /tmp/fink.SoxkS failed, exit code 1
### execution of /tmp/fink.kuzwt failed, exit code 1
Removing runtime build-lock...
Removing build-lock package...
/w2/bin/dpkg-lockwait -r fink-buildlock-saga-2.1.4-2
(Reading database ... 225885 files and directories currently installed.)
Removing fink-buildlock-saga-2.1.4-2 ...
Failed: phase compiling: saga-2.1.4-2 failed

Before reporting any errors, please run "fink selfupdate" and try again.
Also try using "fink configure" to set your maximum build jobs to 1 and
attempt to build the package again.
If you continue to have issues, please check to see if the FAQ on Fink's 
website solves the problem.  If not, ask on one (not both, please) of
these mailing lists:

	The Fink Users List <fin...@li...>
	The Fink Beginners List <fin...@li...>,

with a carbon copy to the maintainer:

	BABA Yoshihiko <bab...@ma...>

Note that this is preferable to emailing just the maintainer directly,
since most fink package maintainers do not have access to all possible
hardware and software configurations.

Please try to include the complete error message in your report.  This
generally consists of a compiler line starting with e.g. "gcc" or "g++"
followed by the actual error output from the compiler.

Also include the following system information:
Package manager version: 0.39.2
Distribution version: selfupdate-rsync Tue Feb 23 17:45:22 2016, 10.11, x86_64
Trees: local/main stable/main local/injected
Xcode.app: 7.2.1
Xcode command-line tools: 7.2.0.0.1.1447826929
Max. Fink build jobs:  4


Before this mail, I tried another ‘fink self update’ and ‘fink configure’ but result is the same.

Marta



> Il giorno 22 feb 2016, alle ore 21:33, Alexander Hansen <ale...@gm...> ha scritto:
> 
> 
>> On Feb 22, 2016, at 10:40, Marta Roggero <mar...@ya... <mailto:mar...@ya...>> wrote:
>> 
>> Good morning,
>> 
>> 	I tried reinstalling Saga on my mac but I can’t. I wrote 'fink install saga' and then I wrote my password. 
>> Error is: 
>> WARNING: your info file index has not been updated for 136 days. You should run
>> 'fink selfupdate' to get the latest package descriptions.
>> 
>> fink needs help picking an alternative to satisfy a virtual dependency. The
>> candidates:
>> 
>> (1)	unixodbc2-nox: ODBC 3 connectivity for Unix
>> (2)	unixodbc2: ODBC 3 connectivity for Unix
>> 
>> Pick one: [1] 1
>> Can't resolve dependency "system-sdk-10.7 | system-sdk-10.8 | system-sdk-10.9 |
>> system-sdk-10.10" for package "wxwidgets300-cocoa-3.0.2-2" (no matching
>> packages/versions found)
>> Exiting with failure.
>> 
>> Thanks.
>> Marta Roggero
>> 
> 
> 
> The OS X version and Xcode version, along with whether just the command-line tools are installed, are often useful pieces of information.  Not having the system-sdk package can be due to a couple of things;
> 
> 1) Only having the Xcode command line tools, and not the GUI application.
> 2) Xcode 7 doesn’t have a 10.10 SDK, even on 10.10, and wxwidgets300-cocoa doesn’t allow the 10.11 SDK as an option.
> 
> As it turns out, wxwidgets300-cocoa doesn’t actually need to use an SDK.  That was a carryover from an earlier build procedure, but I hadn’t updated it because I didn’t realize any packages were still using this wxwidgets packaging.  wxwidgets300-osxcocoa is the packaging which is actually going to be updated in the future (maintainer CC’ed).
> 
> I just updated wxwidgets300-cocoa to remove the SDK build dependency.  It will be available to you via “fink selfupdate” shortly.  
> 
> -- 
> Alexander Hansen, Ph.D.
> Fink User Liaison
> 

Marta Roggero