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[Fink-users] Some remaining problems with *-oct36*
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From: <do...@lp...> - 2012-05-03 08:43:57
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I see the following failures: Can't resolve dependency "liboctave361-gcc46-dev" for package "signal-oct361-1.1.2-4" (no matching packages/versions found) Exiting with failure. and /sw64/bin/tar --no-same-owner --no-same-permissions -xf /sw64/src/odepkg-0.8.2.tar.gz [ -r /sw64/fink/dists/stable/main/finkinfo/sci/odepkg-oct.patch ] patch -p1 < /sw64/fink/dists/stable/main/finkinfo/sci/odepkg-oct.patch patching file src/Makefile Hunk #1 succeeded at 10 with fuzz 2. /tmp/fink.b511H #!/bin/sh -ev if [ $UID -ne 0 ] then echo "odepkg-atlas-oct361 cannot be built with --build-as-nobody" exit 1 fi export OCTAVE=/sw64/bin/octave-3.6.1 srcdir=odepkg-0.8.2 # repack tarball, since octave-3.4.3+ appears not to want to install # from directories if [ 361 -ge 343 ] then cd .. tar -cf $srcdir.tar $srcdir cd /sw64/src/fink.build/odepkg-atlas-oct361-0.8.2-1/odepkg-0.8.2 pkgsrc=$srcdir.tar else pkgsrc=$srcdir fi /sw64/share/octave/3.6.1/scripts/octave-forge-compile.sh $pkgsrc #!/bin/sh -ev cd .. mkdir -p bld/share/octave/3.6.1/packages bld/lib/octave/3.6.1/packages cp /sw64/share/octave/3.6.1/scripts/octave-forge-comp /sw64/share/octave/3.6.1/scripts/octave-forge-inst bld chmod a+x bld/octave-forge* sed -i.bak -e "s/@PKGNAME@/$1/" bld/octave-forge* bld/octave-forge-comp GNU Octave, version 3.6.1 Copyright (C) 2012 John W. Eaton and others. This is free software; see the source code for copying conditions. There is ABSOLUTELY NO WARRANTY; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. For details, type `warranty'. Octave was configured for "x86_64-apple-darwin". Additional information about Octave is available at http://www.octave.org. Please contribute if you find this software useful. For more information, visit http://www.octave.org/help-wanted.html Read http://www.octave.org/bugs.html to learn how to submit bug reports. For information about changes from previous versions, type `news'. executing commands from /sw64/share/octave/site/m/startup/octaverc ... done. warning: function /sw64/share/octave/3.6.1/packages/statistics-1.1.2/fstat.m shadows a core library function executing commands from /sw64/share/octave/3.6.1/m/startup/octaverc ... done. ans = /sw64/src/fink.build/odepkg-atlas-oct361-0.8.2-1/bld/share/octave/3.6.1/packages mkdir (/var/tmp/oct-8HiM0o) untar (./odepkg-0.8.2.tar, /var/tmp/oct-8HiM0o) checking for gcc... oct-cc checking for C compiler default output file name... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether oct-cc accepts -g... yes checking for oct-cc option to accept ISO C89... none needed checking for mkoctfile... /sw64/bin/mkoctfile-3.6.1 retrieving compile and link flags from /sw64/bin/mkoctfile-3.6.1 checking for F77_FUNC... yes checking for octave... /sw64/bin/octave-3.6.1 checking for OCTAVE_VERSION in Octave... 3.6.1 checking for octave_config_info('canonical_host_type') in Octave... x86_64-apple-darwin checking for octave_config_info('SHLEXT') in Octave... dylib checking whether ln -s works... yes checking for ranlib... ranlib checking for strip... strip configure: creating ./config.status config.status: creating Makeconf "$prefix" is /sw64/src/fink.build/odepkg-atlas-oct361-0.8.2-1/bld/share/octave/3.6.1/packages/odepkg-0.8.2 "$exec_prefix" is ${prefix} octave commands will install into the following directories: m-files: /sw64/share/octave/3.6.1/site/m/octave-forge oct-files: /sw64/lib/octave/3.6.1/site/oct/x86_64-apple-darwin/octave-forge binaries: /sw64/lib/octave/3.6.1/site/exec/x86_64-apple-darwin alternatives: m-files: /sw64/share/octave/3.6.1/site/octave-forge-alternatives/m oct-files: /sw64/lib/octave/3.6.1/site/octave-forge-alternatives/oct/x86_64-apple-darwin shell commands will install into the following directories: binaries: ${exec_prefix}/bin man pages: ${datarootdir}/man libraries: ${exec_prefix}/lib headers: ${prefix}/include octave-forge is configured with octave: /sw64/bin/octave-3.6.1 (version 3.6.1) mkoctfile: /sw64/bin/mkoctfile-3.6.1 for Octave 1 find . -name NOINSTALL -print # shows which toolboxes won't be installed cash/mebdfi.f:2932.46: CALL I_INTERP(N,JSTART,H,T,Y,TOUT,Y0) 1 Warning: Rank mismatch in argument 'y0' at (1) (rank-1 and scalar) daskr/ddaskr.f:1931.20: * RWORK(LRX),JROOT,IRT,RWORK(LROUND),INFO(3), 1 Warning: Rank mismatch in argument 'jroot' at (1) (rank-1 and scalar) daskr/ddaskr.f:1954.20: * RWORK(LRX),JROOT,IRT,RWORK(LROUND),INFO(3), 1 Warning: Rank mismatch in argument 'jroot' at (1) (rank-1 and scalar) daskr/ddaskr.f:2182.20: * RWORK(LRX),JROOT,IRT,RWORK(LROUND),INFO(3), 1 Warning: Rank mismatch in argument 'jroot' at (1) (rank-1 and scalar) Undefined symbols: "_dlamch_", referenced from: _mebdf_ in mebdfdae.o _mebdfi_ in mebdfi.o ld: symbol(s) not found collect2: ld returned 1 exit status make: *** [dldsolver.oct] Error 1 'make' returned the following error: Unpacking external packages: hairer.tgz Unpacking external packages: cash.tgz Unpacking external packages: daskr.tgz Applying patches from file: hairer.diff Applying patches from file: cash.diff patching file cash/mebdfdae.f patching file cash/mebdfi.f Applying patches from file: daskr.diff patching file daskr/dlinpk.f mkoctfile -c odepkg_octsolver_mebdfdae.cc -o odepkg_octsolver_mebdfdae.o mkoctfile -c odepkg_octsolver_mebdfi.cc -o odepkg_octsolver_mebdfi.o mkoctfile -c odepkg_octsolver_ddaskr.cc -o odepkg_octsolver_ddaskr.o mkoctfile -c odepkg_octsolver_radau.cc -o odepkg_octsolver_radau.o mkoctfile -c odepkg_octsolver_radau5.cc -o odepkg_octsolver_radau5.o mkoctfile -c odepkg_octsolver_rodas.cc -o odepkg_octsolver_rodas.o mkoctfile -c odepkg_octsolver_seulex.cc -o odepkg_octsolver_seulex.o mkoctfile -c odepkg_auxiliary_functions.cc -o odepkg_auxiliary_functions.o FFLAGS="-fno-automatic -O3" mkoctfile -c cash/mebdfdae.f -o cash/mebdfdae.o FFLAGS="-fno-automatic -O3" mkoctfile -c cash/mebdfi.f -o cash/mebdfi.o FFLAGS="-fno-automatic -O3" mkoctfile -c daskr/ddaskr.f -o daskr/ddaskr.o FFLAGS="-fno-automatic -O3" mkoctfile -c daskr/dlinpk.f -o daskr/dlinpk.o FFLAGS="-fno-automatic -O3" mkoctfile -c hairer/decsol.f -o hairer/decsol.o FFLAGS="-fno-automatic -O3" mkoctfile -c hairer/dc_decsol.f -o hairer/dc_decsol.o FFLAGS="-fno-automatic -O3" mkoctfile -c hairer/radau.f -o hairer/radau.o FFLAGS="-fno-automatic -O3" mkoctfile -c hairer/radau5.f -o hairer/radau5.o FFLAGS="-fno-automatic -O3" mkoctfile -c hairer/rodas.f -o hairer/rodas.o FFLAGS="-fno-automatic -O3" mkoctfile -c hairer/seulex.f -o hairer/seulex.o mkoctfile odepkg_octsolver_mebdfdae.o odepkg_octsolver_mebdfi.o odepkg_octsolver_ddaskr.o odepkg_octsolver_radau.o odepkg_octsolver_radau5.o odepkg_octsolver_rodas.o odepkg_octsolver_seulex.o odepkg_auxiliary_functions.o cash/mebdfdae.o cash/mebdfi.o daskr/ddaskr.o daskr/dlinpk.o hairer/decsol.o hairer/dc_decsol.o hairer/radau.o hairer/radau5.o hairer/rodas.o hairer/seulex.o -o dldsolver.oct \ -lf77blas -lcblas -L/sw64/lib/gcc4.7/lib -lgfortran -lf77blas -lcblas error: called from `pkg>configure_make' in file /sw64/share/octave/3.6.1/m/pkg/pkg.m near line 1385, column 9 error: called from: error: /sw64/share/octave/3.6.1/m/pkg/pkg.m at line 827, column 5 error: /sw64/share/octave/3.6.1/m/pkg/pkg.m at line 383, column 9 error: /sw64/src/fink.build/odepkg-atlas-oct361-0.8.2-1/bld/octave-forge-comp at line 4, column 1 ### execution of /tmp/fink.b511H failed, exit code 1 Removing runtime build-lock... Removing build-lock package... /sw64/bin/dpkg-lockwait -r fink-buildlock-odepkg-atlas-oct361-0.8.2-1 (Reading database ... 437985 files and directories currently installed.) Removing fink-buildlock-odepkg-atlas-oct361-0.8.2-1 ... Failed: phase compiling: odepkg-atlas-oct361-0.8.2-1 failed and the same for 3.6.0 on Package manager version: 0.32.6 Distribution version: selfupdate-rsync Thu May 3 10:36:42 2012, 10.6, x86_64 Trees: local/main stable/main stable/crypto unstable/main unstable/crypto Xcode: 3.2.6 Max. Fink build jobs: 2 TIA Dominique |