Re: [Fink-users] GMT via Fink on Mac OS 10.7

[Alexander H. <ale...@gm...>]

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fink-0.31.2 has introduced a slight change in the build behavior, in
which packages now default to building with however many threads that
the user has set via MaxBuildJobs.  I believe this change was
requested because more packages can handle multithreaded builds than
cannot.  (The install phase is another matter, but fink-0.31.2 always
forces a single thread there)

If you mark the package's .info file with

UseMaxBuildJobs: false

, it will build with a single thread.

- -- 
Alexander Hansen, Ph.D.
Fink User Liaison
http://finkakh.wordpress.com/

On 9/27/11 8:37 PM, Kurt Schwehr wrote:
> Dave,
> 
> Thanks very much for the bug report.
> 
> I get the same error now when doing a "fink rebuild gmt".    Now to
> figure out what changed.
> 
> -kurt
> 
> On Sep 27, 2011, at 3:46 PM, Dave Whipp wrote:
> 
>> Dear Fink GMT users (and Kurt),
>> 
>> I just installed GMT on my Mac running OS 10.7 and wanted to 
>> inform you of a small issue I encountered during the GMT 
>> install.
>> 
>> I installed the compiled the most recent version of Fink
>> (0.31.2) on my Mac without issue. After the install and update
>> process, I attempted to install GMT as follows:
>> 
>>>> fink install gmt
>> 
>> It listed a number of dependencies that would also be installed 
>> (netcdf, etc.) and the process began. There were no issues up 
>> until it attempted to build GMT, where it bailed with the 
>> following message:
>> 
>>> ... gcc -Wl,-x psxy.o -L. -lgmtps -lgmt -lpsl -L/sw/lib 
>>> -lnetcdf   -o psxy gcc -Wl,-x psxyz.o -L. -lgmtps -lgmt -lpsl 
>>> -L/sw/lib -lnetcdf   -o psxyz ### execution of make failed, 
>>> exit code 2 Removing runtime build-lock... Removing build-lock 
>>> package... /sw/bin/dpkg-lockwait -r fink-buildlock-gmt-4.5.7-1
>>>  (Reading database ... 4686 files and directories currently 
>>> installed.) Removing fink-buildlock-gmt-4.5.7-1 ... Failed: 
>>> phase compiling: gmt-4.5.7-1 failed
>>> 
>>> Before reporting any errors, please run "fink selfupdate" and 
>>> try again. If you continue to have issues, please check to see 
>>> if the FAQ on Fink's website solves the problem.  If not, ask 
>>> on one of these mailing lists:
>>> 
>>> The Fink Users List <fin...@li... 
>>> <mailto:fin...@li...>> The Fink Beginners 
>>> List <fin...@li... 
>>> <mailto:fin...@li...>>,
>>> 
>>> with a carbon copy to the maintainer:
>>> 
>>> Kurt Schwehr <go...@us... 
>>> <mailto:go...@us...>>
>>> 
>>> Note that this is preferable to emailing just the maintainer 
>>> directly, since most fink package maintainers do not have 
>>> access to all possible hardware and software configurations.
>>> 
>>> Please try to include the complete error message in your 
>>> report.  This generally consists of a compiler line starting 
>>> with e.g. "gcc" or "g++" followed by the actual error output 
>>> from the compiler.
>>> 
>>> Also include the following system information: Package manager 
>>> version: 0.31.2 Distribution version: selfupdate-rsync Tue Sep 
>>> 27 15:59:45 2011, 10.7, x86_64 Trees: local/main stable/main 
>>> Xcode: 4.1
>> 
>> I didn't see anything obvious as to why it had failed, but I 
>> scrolled up a bit and found this:
>> 
>>> ... Making all in src/meca gcc -O2 -Wall  -fPIC 
>>> -fno-strict-aliasing 
>>> -I/sw/src/fink.build/gmt-4.5.7-1/GMT4.5.7/src -I/sw/include -c
>>> -o psmeca.o psmeca.c gcc -O2 -Wall  -fPIC -fno-strict-aliasing
>>>  -I/sw/src/fink.build/gmt-4.5.7-1/GMT4.5.7/src -I/sw/include -c
>>> -o utilmeca.o utilmeca.c gcc -O2 -Wall  -fPIC 
>>> -fno-strict-aliasing 
>>> -I/sw/src/fink.build/gmt-4.5.7-1/GMT4.5.7/src -I/sw/include -c
>>> -o nrutil.o nrutil.c make[2]: *** No rule to make target 
>>> `../libgmtps.dylib', needed by `psmeca'.  Stop. make[2]: *** 
>>> Waiting for unfinished jobs.... make[1]: *** [meca] Error 2 
>>> make: *** [suppl] Error 2 make: *** Waiting for unfinished 
>>> jobs.... gcc -O2 -Wall  -fPIC -fno-strict-aliasing 
>>> -I/sw/include -DGMT_SHARE_PATH=\"/sw/share/gmt\" -DTRIANGLE_D 
>>> -c -o grdpaste.o grdpaste.c gcc -O2 -Wall  -fPIC 
>>> -fno-strict-aliasing -I/sw/include 
>>> -DGMT_SHARE_PATH=\"/sw/share/gmt\" -DTRIANGLE_D   -c -o 
>>> grdproject.o grdproject.c ...
>> 
>> The 'waiting for unfinished jobs?' tipped me off as to a possible
>> issue. During the configuration of Fink, I had used the default
>> value of 2 for the 'Maximum number of simultaneous build jobs'
>> (as I have a dual core Mac). I reran 'fink configure', set 
>> 'Maximum number of simultaneous build jobs' equal to 1 and then 
>> attempted again to install GMT. Success.
>> 
>> Anyway, I thought that perhaps you'd like to see this in case 
>> others encounter a similar issue. Maybe the build order can be 
>> adjusted to support multi-process compilation.
>> 
>> Hope that is somehow useful.
>> 
>> Cheers, Dave
>> 
>> Dave Whipp Postdoctoral fellow, Dalhousie Geodynamics Group 
>> Department of Oceanography, Dalhousie University 
>> http://sites.google.com/site/dwhipp/ +1 902 494 3450
>> 
> 
> 


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