Re: [Fink-users] failed to install apbs

[Alan <ala...@gm...>]

Hi there,
Well, I found this:

find /sw/src/fink.build | grep site
/sw/src/fink.build/apbs-1.1.0-2/apbs-1.1.0-source/contrib/opal/ZSI/@INSTALL_DIR45643{prefix}/lib/python2.6/site-packages

Apparently, at least IMHO, variable @INSTALL_DIR@ is not correctly being
replaced in apbs.info:
sed 's|@INSTALL_DIR@|%d|g' < %{PatchFile} | patch -p1

In a test, I commented out in apbs.info any reference to python, including
the patch and I got apbs deb and working.

Dear William, would be possible to you to send me your apbs.info and
apbs.patch from sw64/ as well as your apbs deb package?

Many thanks in advance.

Alan

On Fri, Jul 31, 2009 at 19:35, Alexander Hansen <ale...@gm...
> wrote:

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> William Scott wrote:
> >
> >> There's something funny going on in the install script.  For one thing,
> >> it's installing files in
> >>
> >> /sw/src/fink.build/root-apbs-1.1.0-2/sw/src/fink.build/apbs-1.1.0-2/
> >>
> >> I also found the ordering a bit suspect:
> >>
> >> make install DESTDIR=%d
> >> rm -Rf **/CVS     # fink validate complains if this junk is left behind.
> >> # rm -Rf **/.svn  # fink validate complains if this junk is left behind.
> >> mkdir -p %i/share/%n
> >> mkdir -p %i/lib
> >>
> >> I'd have assumed that we'd want to create those directories before 'make
> >> install'.
> >> - --
> >> Alexander Hansen
> >> Fink User Liaison
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> >> iEYEARECAAYFAkpzNMMACgkQB8UpO3rKjQ9ATgCeK9rkwdv7mt61pFn/rdc4RRwu
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> >
> > I'll be happy to change anything, but in my hands it works, and
> validates:
> >
> > % fink -v validate apbs_1.1.0-2_darwin-x86_64.deb
> > apbs-dev_1.1.0-2_darwin-x86_64.deb
> > Validating .deb file apbs_1.1.0-2_darwin-x86_64.deb...
> > Package looks good!
> > Validating .deb file
> >
> > I'm trying to find if there is a missing dependency.  We have the
> > identical setup, apart from my /sw64  vs. his /sw.
> >
> > (I've emailed him back off-list).
> >
> > Bill
> >
> >
> > William G. Scott
> >
> > Contact info:
> > http://chemistry.ucsc.edu/~wgscott/
> >
> >
>
> It doesn't work here (10.5.7/i386)--I get an identical error to Alan.
>
> - --
> Alexander Hansen
> Fink User Liaison
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-- 
Alan Wilter S. da Silva, D.Sc. - CCPN Research Associate
Department of Biochemistry, University of Cambridge.
80 Tennis Court Road, Cambridge CB2 1GA, UK.
>>http://www.bio.cam.ac.uk/~awd28<<