bio2rdf-bugs Mailing List for bio2rdf (Page 6)
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From: SourceForge.net <no...@so...> - 2009-07-30 23:20:32
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Bugs item #2819411, was opened at 2009-07-10 16:24 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2819411&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Web application >Group: v0.8.0 Status: Open Resolution: None Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Add option to ignore output rules to keep endpoint URIs Initial Comment: There should be a configuration option available which ignores all output rules, resulting in RDF documents which will generally contain only the URI's as given on each endpoint, subject to users explicitly creating queries which change the URI's straight back to the default URI's outside of the Normalisation Rule scheme. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2819411&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-30 23:11:18
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Bugs item #2827222, was opened at 2009-07-26 11:38 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2827222&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: v0.7.0 Status: Open Resolution: None >Priority: 9 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Have a custom HTML page for errors Initial Comment: The HTML page is currently the same even if the page represents an erroneous request. Should have a different page to highlight this to users. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2827222&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-30 23:04:28
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Bugs item #2819426, was opened at 2009-07-10 17:29 Message generated for change (Comment added) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2819426&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Configuration files >Group: v0.7.0 Status: Open >Resolution: Accepted Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) >Assigned to: Marc-Alexandre (lotusman) Summary: Make up primaryreverseconstruct and secondaryreverseconstruc Initial Comment: There needs to be a way to allow the use of reverseconstruct for some namespaces but not others, and it would be most appropriately done by making up two types of reverseconstruct, one for where configuration editors know a namespace is unrdfised and they want to include the source to get some information back, and another where configuration editors know that a namespace is rdfised, and there is a usecase for some users not wanting to know about the extra information in typical /namespace:identifier being able to easily exclude "secondaryreverseconstruct" from their list of allowed query types in order to stop the queries occuring and boost the performance of their endpoint with relationship to resolution of /namespace:identifier ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-31 09:04 Message: Initial subversion configuration file change to make both primary and secondary reverse construct queries available. Now need someone (Marc?) to check out the subversion configuration files and manually choose which namespaces on which providers should actually be secondary reverse construct and create new providers as necessary with secondary reverse construct so that they won't be called by the default fast mirror configuration after it is done and check in the resulting changes to the RDF configuration files into subversion ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2819426&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-29 03:14:56
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Feature Requests item #2827532, was opened at 2009-07-27 11:30 Message generated for change (Comment added) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2827532&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Interface Improvements >Group: v0.7.0 >Status: Closed Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Add search box to HTML interface Initial Comment: Add search box to trigger /page/search/ from HTML interface ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-29 13:14 Message: done ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2827532&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-29 03:14:26
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Feature Requests item #2828766, was opened at 2009-07-29 13:14 Message generated for change (Tracker Item Submitted) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2828766&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Model changes Group: None Status: Open Priority: 6 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Allow canonical namespace prefixes, with alternatives Initial Comment: Namespace entries need to be extended to define alternate prefixes that will still match with the namespace URI, but which should not be used in queries. A common use case for this is http://bio2rdf.org/GO:0000112 which currently doesn't resolve, compared to the real URI http://bio2rdf.org/go:0000112 which does resolve. This will likely require a signficant change in the way namespace prefixes are currently implemented internally ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2828766&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-27 21:03:10
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Bugs item #2811857, was opened at 2009-06-24 19:15 Message generated for change (Comment added) made by micheldumontier You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811857&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Ontologies Group: Non-package-related Status: Open >Resolution: Accepted Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Michel Dumontier (micheldumontier) Summary: Build and confirm ontology for geneid namespace Initial Comment: Ensure all of the predicates on http://qut.bio2rdf.org/geneid:110208 are either resolvable, or at least represented in the http://qut.bio2rdf.org/ns/bio2rdf OWL file ---------------------------------------------------------------------- >Comment By: Michel Dumontier (micheldumontier) Date: 2009-07-27 17:03 Message: * is there any way you can reformulate the bio2rdf:subType to rdf:type /ns/geneid:protein-coding? * change bio2rdf:xKeggGene predicate to bio2rdf:xKegg * change bio2rdf:xPubMed predicate to bio2rdf:xPubmed * ontology currently contains bio2rdf:xTaxonomy not bio2rdf:xTaxon - please comment ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811857&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-27 20:39:51
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Feature Requests item #2811858, was opened at 2009-06-24 19:15 Message generated for change (Comment added) made by micheldumontier You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2811858&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. >Category: None >Group: None Status: Open Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Michel Dumontier (micheldumontier) Summary: Build and confirm ontology for interpro namespace Initial Comment: Ensure all of the predicates on http://qut.bio2rdf.org/interpro:IPR008160 are either resolvable, or at least represented in the http://qut.bio2rdf.org/ns/bio2rdf OWL file ---------------------------------------------------------------------- >Comment By: Michel Dumontier (micheldumontier) Date: 2009-07-27 16:39 Message: * please change http://bio2rdf.org/ns/bio2rdf:name to dc:title * multiple URLs are being reported with bio2rdf:url, but this property is functional in the bio2rdf.owl ontology. I can remove the restriction. * the ontology contains bio2rdf:URL, not bio2rdf:url. please advise * the predicate bio2rdf:xInterPro is bio2rdf:xInterpro in the ontology. * the predicate bio2rdf:xPubMed is bio2rdf:xPubmed in the ontology. * why does this page add owl:sameAS to http://bio2rdf.org/ns/interpro:IPR008160 - this record doesn't exist. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2811858&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-27 06:16:20
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Feature Requests item #2827588, was opened at 2009-07-27 16:16 Message generated for change (Tracker Item Submitted) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2827588&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Configuration files Group: None Status: Open Priority: 6 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Make up unsafelinksbynamespace and unsafelinkstonamespace Initial Comment: Need unsafe versions of linkstonamespace and linksbynamespace for use with the dbpedia pagelinks resource ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2827588&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-27 05:40:30
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Feature Requests item #2813779, was opened at 2009-06-29 16:47 Message generated for change (Comment added) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2813779&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Interface Improvements >Group: v0.7.0 >Status: Closed Priority: 6 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Implement /admin/refreshconfiguration Initial Comment: * Need to have a simple URL which is able to trigger the update configuration method internally to supplement the automatic method that is already in use ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 15:40 Message: done ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2813779&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-27 04:46:59
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Bugs item #2813776, was opened at 2009-06-29 16:36 Message generated for change (Comment added) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2813776&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Database maintenance Group: Non-package-related Status: Open Resolution: None Priority: 7 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Marc-Alexandre (lotusman) Summary: go.bio2rdf.org/sparql generates invalid XML Initial Comment: http://quebec.bio2rdf.org/go:0004396 demonstrates an example of the invalid XML currently being generated by the http://go.bio2rdf.org/sparql server. According to the Virtuoso maintainers, this is a configuration issue. ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 14:46 Message: any progress on fixing this issue? ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2813776&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-27 04:44:24
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Bugs item #2824629, was opened at 2009-07-21 13:44 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2824629&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Web application Group: v0.7.0 >Status: Closed >Resolution: Fixed Priority: 8 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Include unknown RDF triples using a List<Statement> Initial Comment: Unknown RDF triples can be included in configuration files for any purpose. In order not to lose these triples when a configuration file is imported, any statements which are not currently recognised as special fields by an implementation must keep these triples in an in memory list of RDF statements and export them if the configuration is exported at any time during the life of the server. ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 14:44 Message: done ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2824629&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-27 01:30:45
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Feature Requests item #2827532, was opened at 2009-07-27 11:30 Message generated for change (Tracker Item Submitted) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2827532&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Interface Improvements Group: None Status: Open Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Add search box to HTML interface Initial Comment: Add search box to trigger /page/search/ from HTML interface ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2827532&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 23:20:17
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Bugs item #2827516, was opened at 2009-07-27 09:20 Message generated for change (Tracker Item Submitted) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2827516&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Configuration files Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Use Uniprot resource URI for their ontology terms Initial Comment: Should be using the Uniprot RDF files for their ontology terms, notably, the whole core: namespace should be resolved using this method. http://qut.bio2rdf.org/page/core:Citation_Statement ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2827516&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 23:15:52
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Feature Requests item #2821675, was opened at 2009-07-15 16:41 Message generated for change (Comment added) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2821675&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Model changes Group: None Status: Open Priority: 8 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Allow for namespace specific Velocity .vm templates Initial Comment: * Should allow for the ability to create namespace specific templates so that namespaces are rendered better if someone has designed a template file for them As part of this will need to allow access to aggregated sets of predicates so that they can all be rendered together as required ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 09:15 Message: Object might be more applicable if it related a single template to a single output MIME format to zero or more namespaces to one or more query string matches. It is troublesome to relate things to query types if they are designed to be relevant to the query string, as there is an immediate one to many relationship between query strings and query types in most situations, and don't really need ordering as in some other cases to make this idea consistent ---------------------------------------------------------------------- Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 09:10 Message: Add a new object relating namespaces and query types to particular velocity templates Namespace/Querytype *List of velocity templates that can all be used if namespace is found in one of the namespace input indexes on the query type ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2821675&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 23:10:52
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Feature Requests item #2821675, was opened at 2009-07-15 16:41 Message generated for change (Comment added) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2821675&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. >Category: Model changes Group: None Status: Open >Priority: 8 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Allow for namespace specific Velocity .vm templates Initial Comment: * Should allow for the ability to create namespace specific templates so that namespaces are rendered better if someone has designed a template file for them As part of this will need to allow access to aggregated sets of predicates so that they can all be rendered together as required ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 09:10 Message: Add a new object relating namespaces and query types to particular velocity templates Namespace/Querytype *List of velocity templates that can all be used if namespace is found in one of the namespace input indexes on the query type ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2821675&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 22:35:42
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Feature Requests item #2827500, was opened at 2009-07-27 08:35 Message generated for change (Tracker Item Submitted) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2827500&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Configuration files Group: None Status: Open Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Only include custom static additions for some output formats Initial Comment: Have option to only include the custom query static additions based on the selected output format... Or possibly only have them show up as interface additions, and not triple additions ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2827500&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 22:29:55
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Feature Requests item #2811806, was opened at 2009-06-25 08:30 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2811806&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. >Category: Model changes Group: None Status: Open >Priority: 6 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Nobody/Anonymous (nobody) Summary: Enable queries to be linked together Initial Comment: * Handle linked query types, with a single master URI triggering a serial set of query types to be utilised with the results chained between them according to SPARQL templates ** Add the type of the query template to the query type definition, ie, ASK, CONSTRUCT/DESCRIBE, and SELECT ** Utilise the results of the query, ${queryResult_VARIABLE} to determine using some internal method whether subqueries should be run, and run them by instantiating the atlas2rdf.jsp using a URI, and simply use the final results of that as the join for the main query which is calling sub queries ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2811806&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 22:29:09
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Bugs item #2811817, was opened at 2009-06-25 08:37 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811817&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: None Status: Open Resolution: None Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Nobody/Anonymous (nobody) Summary: Rdf normalisation of the remaining myExperiment URI's Initial Comment: * Add rdf normalisation rule and namespace for URI's on http://qut.bio2rdf.org/links/myexp_user:6 and http://qut.bio2rdf.org/myexp_workflowversion:83 which still haven't been converted ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811817&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 22:28:18
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Feature Requests item #2813779, was opened at 2009-06-29 16:47 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2813779&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Interface Improvements Group: v0.6.2 Status: Open >Priority: 6 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Implement /admin/refreshconfiguration Initial Comment: * Need to have a simple URL which is able to trigger the update configuration method internally to supplement the automatic method that is already in use ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814192&aid=2813779&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 22:25:36
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Bugs item #2811805, was opened at 2009-06-25 08:29 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811805&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Configuration files Group: v0.7.0 >Status: Closed Resolution: Fixed Priority: 9 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Content negotiation improvements Initial Comment: * Add content negotiation into other parts such as templates and provider configurations ** Add content-type as a template parameter so it can be used in both URL's and SPARQL templates ** Add content-negotiation string as provider configuration parameter so content negotiation can be utilised at the provider level, and not just the global level, where particular providers respond better to a particular type. ** Implement a preferred interpretation type for providers so that we don't have to rely on the type the server says a document is in cases where it isn't true consistently ** Add /rdfxml/ with similar functionality to /n3/ ** Add html view of rdf results at some stage ---------------------------------------------------------------------- Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 08:25 Message: done ---------------------------------------------------------------------- Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 08:24 Message: partially done, but rest can be defered to a later stage if the templates part is actually needed Provider accept headers are allowed for, and /rdfxml/ and /page/ have been implemented alongside /n3/ to resolve the rest of this bug ---------------------------------------------------------------------- Comment By: Peter Ansell (p_ansell) Date: 2009-07-21 15:24 Message: /rdfxml/ and /page/ implemented for 0.7.0 upcoming release ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811805&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 22:25:04
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Bugs item #2811805, was opened at 2009-06-25 08:29 Message generated for change (Comment added) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811805&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Configuration files Group: v0.7.0 >Status: Open >Resolution: Fixed Priority: 9 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Content negotiation improvements Initial Comment: * Add content negotiation into other parts such as templates and provider configurations ** Add content-type as a template parameter so it can be used in both URL's and SPARQL templates ** Add content-negotiation string as provider configuration parameter so content negotiation can be utilised at the provider level, and not just the global level, where particular providers respond better to a particular type. ** Implement a preferred interpretation type for providers so that we don't have to rely on the type the server says a document is in cases where it isn't true consistently ** Add /rdfxml/ with similar functionality to /n3/ ** Add html view of rdf results at some stage ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 08:25 Message: done ---------------------------------------------------------------------- Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 08:24 Message: partially done, but rest can be defered to a later stage if the templates part is actually needed Provider accept headers are allowed for, and /rdfxml/ and /page/ have been implemented alongside /n3/ to resolve the rest of this bug ---------------------------------------------------------------------- Comment By: Peter Ansell (p_ansell) Date: 2009-07-21 15:24 Message: /rdfxml/ and /page/ implemented for 0.7.0 upcoming release ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811805&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 22:24:33
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Bugs item #2811805, was opened at 2009-06-25 08:29 Message generated for change (Comment added) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811805&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Configuration files Group: v0.7.0 >Status: Closed >Resolution: Accepted Priority: 9 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Content negotiation improvements Initial Comment: * Add content negotiation into other parts such as templates and provider configurations ** Add content-type as a template parameter so it can be used in both URL's and SPARQL templates ** Add content-negotiation string as provider configuration parameter so content negotiation can be utilised at the provider level, and not just the global level, where particular providers respond better to a particular type. ** Implement a preferred interpretation type for providers so that we don't have to rely on the type the server says a document is in cases where it isn't true consistently ** Add /rdfxml/ with similar functionality to /n3/ ** Add html view of rdf results at some stage ---------------------------------------------------------------------- >Comment By: Peter Ansell (p_ansell) Date: 2009-07-27 08:24 Message: partially done, but rest can be defered to a later stage if the templates part is actually needed Provider accept headers are allowed for, and /rdfxml/ and /page/ have been implemented alongside /n3/ to resolve the rest of this bug ---------------------------------------------------------------------- Comment By: Peter Ansell (p_ansell) Date: 2009-07-21 15:24 Message: /rdfxml/ and /page/ implemented for 0.7.0 upcoming release ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2811805&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 22:21:57
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Bugs item #2819402, was opened at 2009-07-10 15:57 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2819402&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: Configuration files >Group: v0.7.0 Status: Open Resolution: None >Priority: 8 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Take profiles out of /admin/configuration Initial Comment: Profiles shouldn't be distributed in the same manner as the other items, as they should always be overridable by users, which might not be the case if the profiles are downloaded together with the other items. Make up a /admin/profiles that is visible based on whether a bio2rdf.properties configuration setting is enabled, but will always be visible on public resolvers for debugging and exploration purposes. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2819402&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 21:13:13
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Bugs item #2827222, was opened at 2009-07-26 11:38 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2827222&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. Category: None Group: v0.7.0 Status: Open Resolution: None >Priority: 8 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Have a custom HTML page for errors Initial Comment: The HTML page is currently the same even if the page represents an erroneous request. Should have a different page to highlight this to users. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2827222&group_id=142631 |
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From: SourceForge.net <no...@so...> - 2009-07-26 21:11:47
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Bugs item #2827222, was opened at 2009-07-26 11:38 Message generated for change (Settings changed) made by p_ansell You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2827222&group_id=142631 Please note that this message will contain a full copy of the comment thread, including the initial issue submission, for this request, not just the latest update. >Category: None >Group: v0.7.0 Status: Open Resolution: None Priority: 5 Private: No Submitted By: Peter Ansell (p_ansell) Assigned to: Peter Ansell (p_ansell) Summary: Have a custom HTML page for errors Initial Comment: The HTML page is currently the same even if the page represents an erroneous request. Should have a different page to highlight this to users. ---------------------------------------------------------------------- You can respond by visiting: https://sourceforge.net/tracker/?func=detail&atid=814189&aid=2827222&group_id=142631 |
