AAARF Genomic Repeat Investigation download

AAARF, written in PERL and with numerous adjustable parameters, identifies sequence overlaps in small shotgun sequence datasets and walks them out to create long pseudomolecules representing the most abundant repeats in a genome.

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License

GNU Library or Lesser General Public License version 2.0 (LGPLv2)

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Additional Project Details

Operating Systems

Mac

Languages

English

Intended Audience

Science/Research

User Interface

Command-line

Programming Language

Perl

Related Categories

Perl Genetic Algorithms, Perl Bio-Informatics Software

Registered

2007-06-29

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