Search Results for "calculation"
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Showing 11 open source projects for "calculation"
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1
mosdepth
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
mosdepth is a fast BAM/CRAM depth calculation tool for genomic data, allowing efficient computation of sequencing coverage. -
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GluCat: Clifford algebra templates
Calculation with Clifford algebras: C++ library and Python module
GluCat is a generic library of C++ templates that implement universal Clifford algebras over the field of real numbers. The PyClical extension module for Python gives users an easy Python scripting interface for calculations in Clifford algebras. The name PyClical is an homage to Pertti Lounesto's CLICAL. -
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DeepLabv3 Plus
Encoder-Decoder with Atrous Separable Convolution
...The repository supports VOC-style segmentation datasets and includes utilities for annotation generation, JSON dataset conversion, model summary inspection, prediction, and metric calculation. It provides pretrained weight workflows for MobileNetV2 and Xception backbones and notes that the correct backbone should be selected during training and prediction. The project also supports multi-GPU training, multiple backbones, learning rate schedules with step and cosine options, optimizer selection, and adaptive learning rate behavior based on batch size. ... -
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Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
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5
fooltrader
Quant framework for stock
Build a standard data schema, and then implement various connectors to import systems you are familiar with for analysis. fooltrader is a quantitative analysis trading system designed using big data technology, including data capture, cleaning, structuring, calculation, display, backtesting and trading. Its goal is to provide a unified framework for the whole market (stock, futures, bonds, foreign exchange, digital currency, macroeconomics, etc.) for research, backtesting, forecasting, and trading. Its applicable objects include quantitative traders, teachers, and students majoring in finance, people interested in economic data, programmers, and people who like freedom and the spirit of exploration. ... -
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Solid Python
A comprehensive gradient-free optimization framework written in Python
Solid is a Python framework for gradient-free optimization. It contains basic versions of many of the most common optimization algorithms that do not require the calculation of gradients, and allows for very rapid development using them. -
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Template Code Set for JModelica
This is a template Python code set to use JModelica easily.
This is a template Python code set which makes it easy to use JModelica to solve optimal control problem. The template includes a sample model definition file (opt_definition.mop) and a .bat file (run_me.bat) to start its calculation. After download the template, immediately you can run JModelica by only double-clicking run_me.bat file, and obtain the optimization result. Please go to the page given below for the information of how to start to use this and its details. -
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NGSbinningpytools
Python tools for binning NGS scaffolds to various genomes.
Next generation sequencing has opened new avenues for sequencing prokaryotes which were difficult or either impossible to culture. Now, it is possible to sequence all organisms present in a metagenomic community. However, a critical problem is to determine the host organism for each genomic fragment present in the dataset. This project provides the computational tools for assigning the organismal identity for each genomic scaffold in the given dataset. For more detailed documentation... -
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py-astro
An astronomical library.
Python package for calculation right ascension, declination, and distance for solar system planets. -
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Unit Var
Automatic Units and Scale calculation in Python
Doing calculations in a programming language is done without the corresponding units. This is a source of programming mistakes. In the units and in the scale. This class try to solve this issue, buy instead of numbers use a class that contains both: The number in int,float and the units / reciprocate units. A conversion table is integrated, and preloaded with standard units. But you are not limited to those units. You can define the units you want. You can select between manual... -
11
pykb
Python Killboard Platform for EVE Online
...Static data and schemas for PostgreSQL and MySQL are provided. Aggregates exist along with code to maintain them to enable high speed reports for summarized data. A point calculation system is included as is support for parsing German and Russian kill mail text. Caching exists in two forms, a basic in memory dict based caching system suitable for single process tasks and integration with uwsgi's powerful and fast built in cache. Utility modules are provided for adding in killmails, backfilling killmails and dumping them via the command line. ...
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