Search Results for "gnu science" - Page 4
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Showing 453 open source projects for "gnu science"
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RANGE: produce random genetic transcription networks in the NEMO language, which when compiled outputs models in Systems Biology Markup Language. Generate synthetic microarray data, or use NEMO alone to SBML-ize a network, or visualize it in cytoscape.
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FreeSOLID is a library for collision detection of three-dimensional objects undergoing rigid motion and deformation. FreeSOLID is designed to be used in interactive 3D graphics applications.
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neuranep
Neural Network Engineering Platform
A parallel-programming framework for concurrently running large numbers of small autonomous jobs, or microthreads, across multiple cores in a CPU or CPUs in a cluster. NeuraNEP emulates a distributed processing environment capable of handling millions of microthreads in parallel, for example running neural networks with millions of spiking cells. Microthreads are general processing elements that can also represent non-neural elements, such as cell populations, extracellular space, emulating... -
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SOAPdenovo2
Large-size genome de-novo assembler
What's next of SOAPdenovo2: MEGAHIT is the formal successor of SOAPdenovo2 MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph http://www.ncbi.nlm.nih.gov/pubmed/25609793 https://github.com/voutcn/megahit Latest Code on GitHub: https://github.com/aquaskyline/SOAPdenovo2 SOAPdenovo is a novel short-read assembly method that can build a de novo draft assembly for human-sized genomes. The program is specially designed... -
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The target system of this project is to develop mathematically efficient program code generator from cellml like biological models described by mathematical markup languages.
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Arbitrary Precision Calculator a Qt-based user interface to the Calc library “Calc - C-style arbitrary precision calculator” (2.12.2.2 with fixes up to 2.12.4.3) by Landon Curt Noll et. al. http://isthe.com/chongo/tech/comp/calc/ and also https://sourceforge.net/projects/calc/ This project owes an enormous debt of gratitude to Landon.
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Libraries, documentation, examples & drivers for Eagle Technology South Africa's Data Acquisition products. These include ISA, PCI, PCI Express, USB, Serial & Ethernet. Supported languages will be C/C++, JAVA, Perl, Python.
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AVRS performs spatial 3D-sound processing allowing the arbitrary placement of sound source in auditory space. The main goal is to develop a genuine experimental flexible platform, that runs in a general-purpose architecture computer (standard hardware and software).
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Discrete Event Gnu Advanced Scheduling for plug-in replacement of pthread compatible applications. Generates deterministic execution runs suitable for discrete event simulations and formal verification.
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GGI stands for "General Graphics Interface", and it is a project that aims to develop a reliable, stable and fast graphics system that works everywhere. We want to allow any program using GGI to run on any platform requiring at most a recompile.
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Shared Memory Arena
shared memory allocator
a shared memory allocator that provides a simple interface for named shared memory segments; shared memory between any processes; provides shared memory queues; does not use the same address between processes; fast structured arena file scales well -
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Advanced Numerical Instruments 2D
Advanced numerical instruments: adaptive meshing, FE methods, solvers
Ani2D provides portable libraries for each step in the numerical solution of systems of PDEs with variable tensorial coefficients: (1) unstructured adaptive mesh generation, (2) metric-based mesh adaptation, (3) finite element discretization and interpolation, (4) algebraic solvers. -
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SLOCCount is an easy-to-use tool that counts Source Lines of Code (SLOC). It auto-determines the language(s) (inc. C, C++, Ada, Assembly, shell, COBOL, C#, Fortran, Haskell, Java, LISP/Scheme, Perl, PHP, Python, Ruby, SQL). It also estimates cost & time.
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GDB-ILI extends the GNU debugger with a generic interface to various interpreter languages. Features: Data transfer from/to debugee, direct interaction in interpreter shell, extended breakpoints,... Support for Matlab(R) and GNU Octave is included.
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Trad4 is a fully concurrent, thread safe, graph-based programming language that scales linearly on multiple cores. It is initially intended for deployment in the financial industry to model real-time risk.
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GNU Rocket is an intuitive new way of controlling missiles. The project has moved to GitHub: http://github.com/rocket/rocket
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QNetMapMigrate
Wrapper for QNetMap library
This is a library that allows applications that does not use Qt to use the QNetMap library (https://sourceforge.net/projects/qnetmap/). Library developed in the T8 LLC (http://t8.ru). Written and supported by Sergey Shumeyko. -
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This is a project for Andre to share CellML related tools he works on that other people might find useful.
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PARUS
Dataflow parallel programming language for clusters
PARUS is a data-flow parallel programming language that allows to build parallel programs for clusters and MPP multiprocessors. The data-flow graph is automatically converted to the C++/MPI source and linked with the libparus runtime library. Also there are available tools for benchmarking cluster interconnect and visualize it. -
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GLP-Solve
An IDE for lpsolve made in C language
This IDE replicates the official lpsolve project IDE made in Delphi. Its author is Juan José Gago Martínez. Project stopped at version 1.2, but now is being revived by Hélio Guilherme, starting with version 1.2.1. -
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FreeOSEK RTOS
Project has been move to https://github.com/ciaa/Firmware
The project is not more active, we have fix a lot of issue and perform many improvements. These are now deliverd as part of a new project: https://github.com/ciaa/Firmware ---- FreeOSEK is a scalable solution for embedded system. FreeOSEK OS is based on OSEK RTOS specification (OSEK-VDX). visit us in: http://opensek.sourceforge.net -
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Galliwasp
Goal-directed answer-set programming
Galliwasp is an answer set programming (ASP) system utilizing a unique top-down, goal-directed execution method. -
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dBASE Reader and Converter
!!! NO LONGER MAINTAINED !!!
dbf is an easy-to-use command line tool to show and convert the content of dBASE III, IV, and 5.0 files. It reads dBASE databases and prints the content to the screen or converts it to comma-separated (*.csv) files which can be opened in Excel, Calc. -
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eXtensible Modular Hypervisor Framework
Hypervisor R&D for recent x86 with support for DRTM + 2D paging
***** XMHF is no longer in active development. It is superseded by uberXMHF (uber eXtensible Micro-Hypervisor Framework) which is available at: http://uberxmhf.org ***** XMHF is an eXtensible and Modular Hypervisor Framework that strives to be a comprehensible and flexible platform for performing hypervisor research and development. The framework allows others to build custom (security-sensitive) hypervisor-based solutions (called "hypapps"). XMHF advocates a "rich" single-guest... -
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ktree
clustering, machine learning, algorithms
This project has moved to github at http://lmwtree.devries.ninja.
