Search Results for "b-link"
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Showing 30 open source projects for "b-link"
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MzDOCK - Multiple Ligand Docking Tool
MzDOCK is A Virtual Screening Tool For Drug Discovery Research
- Molecular Docking Virtual Screening Tool To Aid In Drug Discovery Research. - Published in Wiley, Journal of Computational Chemistry . Link: https://onlinelibrary.wiley.com/doi/abs/10.1002/jcc.27390 - Developed with Synchronized functioning of Python and Batch scripts -Integerated With Pymol-open-source for visualizing interaction (PSE file) generated from MzDOCK - Integrated with Molecule Drawing Tool - JSME Editor - If you are facing any issues or for queries . -
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Code_TYMPAN
Open source software calculating industrial noise in the environment
...In 4.2.x version, a Python API allows advanced users to build and solve models programmatically. By this mean, developers have the capability of building new tools with acoustic features with high productivity. Find useful resources in External Link : - Source Code, - User Documentation, - Developer Documentation, - DefaultSolver Note, - 9613Solver Note. -
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DeepSee
Visualize deep ocean biogeochemical sediment samples in 2D and 3D!
...🦑🦀🐚 🚀 For a live demo, visit: https://www.its.caltech.edu/~datavis/deepsee/ 🌱 To get started, visit our Wiki: https://sourceforge.net/p/deepsee/wiki/Home/ 🧑💻 To modify DeepSee for your own project, visit our GitHub repository: https://github.com/orphanlab/DeepSee/ --- Created by Adam Coscia, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, and Victoria J. Orphan. Copyright (c) 2022-23 California Institute of Technology ("Caltech"). U.S. Government sponsorship acknowledged. All rights reserved. Open Source License Approved by Caltech/JPL APACHE LICENSE, VERSION 2.0 --- -
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WRoute
Simulador de camiones basado en datos geográficos y no geográficos
WRoute es un simulador de camiones basado en datos geográficos (OpenStreetMap) y datos no geográficos (modelos cinemáticos) para poder simular y analizar el coste de combustible de camiones. WRoute es un proyecto Open Source, cuya autoria está protegida por derechos de autor, por lo que cualquier uso, modificación o distribución de WRoute o su código deberá estar citado como: Fernando Pérez-Rodríguez, Luís Nunes, Ângelo Sil, João Carlos Azevedo (2016) Software: WRoute 1.0. Ref... -
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ADE_3D_FEM
A 3D ADE FEM solver including a manual and a basic preprocessor
A 3D Advection-Diffusion Equation Finite Element Method solver including a user's manual and a basic pre-proccessor. -
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StateS
Draw and Simulate Finite States Machines (FSM)
Simple tool for drawing Finite State Machines (FSMs). StateS has moved to GitHub and will no longer be updated on SourceForge. New link: https://github.com/ClementFoucher/StateS -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
...Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta, gamma can also be entered manually. Processed data can be saved as .csv file format. Designed by M Kanagasabapathy, Associate Professor, Department of Chemistry, Rajus' College, Affiliated to Madurai Kamaraj University Rajapalayam (TN) India email: rrcmks(at)gmail.com -
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2D Structural Analysis
Determine the bending moments, shear forces, axial forces and displace
2D Structural Analysis in Python by Ritchie Vink A collection examples of 2D Finite Element Analysis (FEA) made with Jupyter Notebook Lab - https://jupyter.org/ To install Jupyter - https://jupyter.org/install ===== App is available on Play Store -> https://play.google.com/store/apps/details?id=com.ulm.struct If you want to download a python editor for your android smartphone follow this link -> https://play.google.com/store/apps/details?id=com.ulm.python -
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dupost
Dual Porosity Stokes model implemented with FEniCS
A coupled dual porosity Stokes model implemented with FEniCS. References: 1. C. Douglas, X. Hu, B. Bai, X. He, M. Wei and J. Hou, "A Data Assimilation Enabled Model for Coupling Dual Porosity Flow with Free Flow," 2018 17th International Symposium on Distributed Computing and Applications for Business Engineering and Science (DCABES), Wuxi, 2018, pp. 304-307. doi: 10.1109/DCABES.2018.00085 2. Hu X., Douglas C.C. (2019) An Implementation of a Coupled Dual-Porosity-Stokes Model with FEniCS. ... -
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This is a standalone program for a) the calculation of diffusion coefficients of sorbates inside nanoporous materials at different loadings by using transition rate constants and for b) solving the master equation for a system consisted of a large number of unit cells per each direction. It is based on the following published paper "Kolokathis, P. D., Braun, O. M.. J. Comput. Chem. 2019, 40, 2053– 2066. DOI: 10.1002/jcc.25857"
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trnsys-fmu
The FMI++ TRNSYS FMU Export Utility
...Instructions on installation and usage are given in the documentation, which is provided as part of the download. This documentation also contains a tutorial on how to export a TRNSYS model as FMU for co-simulation and how to link it with a simple controller implemented in Modelica. The tool is based on code from the FMI++ library. -
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PDBManip
PDBManip is a free program for editing PDB (Protein Data Bank) Files
PDBManip is a free program for editing and manipulating PDB (Protein Data Bank) files. It has a graphical user interface and it is provided as an executable file for running on Windows® operating systems. There is a bunch of free programs on the internet for the same purpose. What discriminate between PDBManip and those programs is that PDBManip uses AngelScript language which is very similar to C/C++ language, to write scripts to do our editing tasks. I know that the text-manipulation... -
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DLCSim
Controller-Pilot Data Link Simulator for procedural and radar training
DLCSim is now capable of procedural and radar control, with option of connecting to FSX or Prepar3D flight simulator for real time aircraft tracking. -
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Pixel Empires
A cellular automation simulation governed by probability.
...In the next iteration, the new cells follow the same process. Second, every color is predestined to consume another color if the two make contact. In other words, if Color A consumes Color B, whenever Color A's cells randomly select Color B's cells, that selected cell will be converted to Color A. Third, if the population of a color is below a certain threshold number, this color will randomly choose another color to consume (this chosen color may even be a color that no longer exists on the grid). -
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SPAT
Satellite Power Analysis Tool
# Satellite Power Analysis Tool (SPAT) The tool was originally created to aid during the Satellite Power System design process, however it has evolved to a Satellite Missoin design tool. The user defines the mission and the Satellite design paramenters and, the tool will output: - Power analysis - Battery charge/discharge analysis - Link budget - Ground track coverage - Ground station visibility SPAT has been developed in MATLAB and MCR (Matlab runtime) is required. SPAT is pre-compiled and currently available for MacOS and Windows email: aitorvs(AT)gmail.com -
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BlueSky Open Air Traffic Simulator
BlueSky Open Air Traffic sim, (Windows/Linux/Mac, Python 2.x based)
...It includes only open, license free data for navigation and aircraft performance but is also compatible with BADA 3. Can be used for ATC research or any other aviation or air transport related simulation studies. Is also able to visualize ADS-B traffic. BlueSky commands, and thus the scenario files, are compatible with the TMX simulator in use by NLR and NASA. BlueSky is originally developed, and still moderated, by prof. Jacco M. Hoekstra and staff and students of the TU Delft. More documentation can be found at the website and inside the doc folder. -
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Java Elastic Optical Link Simulator
Discrete event simulator for elastic optical links.
This simulator is primarily intented to test allocation policies for elastic optical links -
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igafem
Open source 3D Matlab Isogeometric Analysis Code
Isogeometric analysis (IGA) is a fundamental step forward in computational mechanics that offers the possibility of integrating methods for analysis into Computer Aided Design (CAD) tools and vice versa. The benefits of such an approach are evident, since the time taken from design to analysis is greatly reduced leading to large savings in cost and time for industry. The tight coupling of CAD and analysis within IGA requires knowledge from both fields and it is one of the goals of the... -
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illustrative_progs
collection of illustrative programs:small games, simulators: C, Matlab
...Other types of programs may figure too: Snake or Tetris in C for showing the C programming style opted for the other, more specific programs. Possibly this is a link for supplying material to some Wiki articles related to videogames and gamep-physics. -
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NoCTweak
a Parameterizable Simulator for Early Exploration of Networks On-Chip
...McSim is a simulator for NoC-based many-core platforms, and is a part of the DreamCloud European project. DreamCloud allows dynamic resource allocation in many-core systems targeting high performance and energy efficient embedded applications. DreamCloud and McSim link: https://github.com/DreamCloud-Project -
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UM-OLSR is an OLSR (Optimized Link State Routing protocol) implementation for the ns2 network simulator.
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Pamvotis is a Wireless LAN Simulator for all the current physical layer extentions of the IEEE 802.11 (IEEE 802.11 a/b/g) standard and for the IEEE 802.11e Draft for Quality of Service in WLANs.
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The SNP ratio test can assess significance of enrichment of significant associations in genome-wide association studies. Tests can be applied to pathways such as KEGG/GO, or user-defined pathways to test specific hypotheses. See link below for more.
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ciperf is used to calculate the -b and -l values for iperf in order to produce a chosen udp packet throughput (overhead = 51 bytes) in respect to some variables which may change the calculation of the parameters (e.g. computers, links, ...).
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Little b is a Lisp-based language which allows scientists to build shareable, reusable mathematical models of complex systems based on shared parts. The initial focus is molecular and multicellular networks. Project web page: http://www.littleb.org
