Showing 344 open source projects for "android version 5"

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  • 1

    LipidWrapper

    Create lipid-bilayer models of arbitrary geometry.

    LATEST VERSION NOW LOCATED AT http://git.durrantlab.com/jdurrant/lipidwrapper As ever larger and more complex biological systems are modeled in silico, approximating physiological lipid bilayers with simple planar models becomes increasingly unrealistic. When building large-scale models of whole subcellular environments, models of lipid membranes with carefully considered, biologically relevant curvature are essential. LipidWrapper, written by Jacob Durrant in the lab of Rommie E. Amaro,...
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  • 2
    eANN

    eANN

    eANN is an implementation of several kind of neural networks.

    eANN is an implementation of several kind of neural networks written with the intention of providing a (hopefully) easy to use, and easy to modify, OOP source code. It is possible to have several different sized networks running simultaneously, each functioning independently of the others or acting as inputs between them. It also easy to modify the structure so that neurons (or even whole layers) can be created/pruned during simulation allowing dynamic expansion/contraction of the network.
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  • 3
    JFCM
    Java implementation of Fuzzy Cognitive Maps (FCM). Implementation aims to be: small (and fast), simple to use, flexible enough to be used as a basis for other projects / libraries.
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  • 4
    FPGA remote lab

    FPGA remote lab

    Laboratory for remote practices in FPGA devices

    The design of an open platform devoted to allow students perform distance practices with a real FPGA device involves both hardware and software components.
    Downloads: 0 This Week
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  • 5

    uranus4abm

    Universal Random Number Service for Agent-Based Models

    The purpose of URaNuS (Universal Random Number Service) is to provide a common library for Agent-based models that allows modelers to define different random streams and/or generators for different model parts in order to investigate the influence of distinct model parts to stochasticity. It is also useful to manage random numbers in the interplay of multiple libraries.
    Downloads: 0 This Week
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  • 6

    Advanced Numerical Instruments 2D

    Advanced numerical instruments: adaptive meshing, FE methods, solvers

    Ani2D provides portable libraries for each step in the numerical solution of systems of PDEs with variable tensorial coefficients: (1) unstructured adaptive mesh generation, (2) metric-based mesh adaptation, (3) finite element discretization and interpolation, (4) algebraic solvers.
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  • 7
    GSI Student ToolBox
    GSI student toolbox is a software package made for teaching purposes. It allows you to perform seismic inversion using global sthocastic inversion method made within CERENA/CMRP. NOTE: you can perform the same operations done with GSI Student Toolbox with our newest software GEOMS2. You can download the beta release here: https://sourceforge.net/projects/geoms2/
    Downloads: 1 This Week
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  • 8
    DECI

    DECI

    Défense Extérieure Contre l'Incendie

    Logiciel de calcul des besoins hydrauliques nécessaires aux sapeurs-pompiers pour assurer la défense extérieure contre l'incendie des bâtiments d'habitation, établissements recevant du public, bâtiments industriels et zones d'activité. Basé sur l'arrêté préfectoral du Finistère n°2014156-005 du 5 juin 2014 portant approbation du guide départemental de référence pour la défense extérieure contre l’incendie.
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  • 9

    Serapis

    System for the evacuation and relocation of affected pop. in shelters

    Serapis can be used to simulate the mass evacuation of a population from a city with constraints on transport network. Contrary to other similar software, Serapis does not simulate the full transport but focus only on throughput of congestion points. It allows to differentiate between the behaviours and possibilities of different categories of population (children, elderly people, disabled...).
    Downloads: 0 This Week
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  • 10

    openhealthpractice

    A simulation environment for physiology models simulation

    The OpenHealhPractice Simulation Environment is a web framework intended to concurrently manage and launch generalized models. Models can be uploaded by the users and also can be connected to other models in order to simulate them in a row. These simulations are stored and can be reviewed or deleted at anytime. The Graphical Visualization Environment (GVE) provides the graphical visualization of the simulation results. Results can also be exported to different formats (xls, txt or...
    Downloads: 1 This Week
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  • 11
    Open source software for Bayesian statistics using Markov Chain Monte Carlo simulation.
    Downloads: 0 This Week
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  • 12

    PhEq_bootstrap

    FDA's f2 computation with bootstrap technique

    This program was developed as a help in establishing pharmaceutical equivalence by use of FDA f2 coefficient. It was designed to help with f2 computation in cases when intra- and inter-batch variability is large, namely RSD>10%. The use of statistical bootstrap technique allows to implement confidence interval (CI) into the f2 coefficients resulting in overcoming of their major drawback in the original metrics. The algorithm provides possible “worst case scenario” of f2 values, thus...
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    Downloads: 24 This Week
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  • 13
    Matlab/Octave implementation of the Rigorous Coupled Wave Analysis
    Downloads: 2 This Week
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  • 14
    TrafficModeller is an open-source, graphical user interface (GUI) tool for the rapid high-level modeling and generation of vehicular traffic. TrafficModeler supports a variety of traffic definition models representing a wide range of traffic patterns
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  • 15
    MQ Dataset Generator

    MQ Dataset Generator

    Dataset Generator

    Evaluation of methods/software is considered as a very important procedure for any user who wants to know the actual performance of a scientific tool. For the implementation of such evaluation procedure several test cases - scenarios shall be run. Obtaining the necessary test data sets can be an obstacle due to both privacy issues and also the time and cost associated with collecting multiple instances of a diverse set of data sources. An efficient alternative is the design and use of...
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  • 16
    MIST

    MIST

    A MATLAB toolbox to simulate optical systems

    Modal Interferometer Simulation Tool (MIST) is a MATLAB toolbox that can simulate arbitrary resonant optical systems in the paraxial beam approximation. It allows the user to define any optical setup (composed typically of laser sources, mirrors, lenses, electro-optical modulators and detectors) and to compute the static laser field at any point. It uses a Hermite-Gauss modal decomposition to simulate diffraction limited optics. This tool is being developed mainly for simulation of large...
    Downloads: 5 This Week
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  • 17
    Impact Finite Element Program
    Impact is an explicit Finite Element Program Suite which simulates dynamic impact events. It has a range of elements, contact handling and different material laws. Models can be created, solved and analyzed with the included pre- and postprocessor. Impact is based on an Explicit Time stepping algorithm. These kind of codes are used to simulate dynamic phenomena such as car crashes and similar, usually involving large deformations.
    Downloads: 5 This Week
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  • 18
    Elastic network models (ENMs) have been shown to generate the dominant functional equilibrium motions of biomolecules quickly and efficiently. MAVEN simplifies ENM generation, allows for diverse models to be used, and facilitates useful analyses.
    Downloads: 1 This Week
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  • 19
    Fast Finite Element Method implementation in native MATLAB.
    Downloads: 0 This Week
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  • 20
    GENESIS (GEneral NEural SImulation System) is a software platform for the simulation of neural systems ranging from subcellular components and biochemical reactions to complex models of single neurons, large networks, and systems-level processes.
    Downloads: 3 This Week
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  • 21
    SimAssem

    SimAssem

    For processing and/or simulating species assemblage data.

    SimAssem is a tool for investigating the performances of species richness estimators across widely ranging assemblages and survey designs. Assemblages are simulated by specifying the: 1) number of species, 2) total abundance of individuals, 3) abundance distribution, 4) spatial configuration, 5) species detection probabilities, 6) survey design, and 7) number of grid cells to survey (out of a square grid comprised of 10,000 cells). SimAssem also processes existing encounter data and formats...
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  • 22
    Japrosim is a java library for both discrete event and continuous simulation. GUI for modeling and automatic code generation are offered. An explanation module is integrated. Models are described in XML and owl for interoperability.
    Downloads: 1 This Week
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  • 23
    OpenCMISS-Zinc

    OpenCMISS-Zinc

    A Library for Interactive Modelling and Visualisation

    The OpenCMISS-Zinc Library (opencmiss.org/zinc), or Zinc, is a software library for building interactive graphical modelling and visualisation applications. Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image...
    Downloads: 4 This Week
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  • 24

    WISP

    Weighted Implementation of Suboptimal Paths (WISP)

    UPDATE: LATEST VERSION AT http://git.durrantlab.com//jdurrant/wisp Allostery can occur by way of subtle cooperation among protein residues (e.g., amino acids) even in the absence of large conformational shifts. Dynamical network analysis has been used to model this cooperation, helping to computationally explain how binding to an allosteric site can impact the behavior of a primary site often many angstroms away. Traditionally, computational efforts have focused on the most optimal path...
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  • 25
    A parallel system simulator kernel that support ultra-large scale computer system simulation.
    Downloads: 0 This Week
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