Open Source Mac Simulation Software - Page 15

An effort to create free and open enviroment, to build complex "rail world", including all rail technology lovers' interests - locomotives (steam, diesel, electric) - driving or documentation, physics, traffic control, etc.

parFE is fully-parallel high-performance finite element code targeted to the modeling of trabecular bones in humans. It employs scalable multigrid solvers for efficient solutions on massively parallel computers.

This python package aims to help people set up and analyze molecular dynamics simulations in aqueous-organic solvent mixtures. See D. Alvarez-Garcia et al. Journal of Medicinal Chemistry, 2014.

syfluid is a funny toy as well as a real simulation. It simulates a fluid or a gas in a very colorful, graphic and sometimes psychodelic way. In realtime! Drag while your right mouse button is pressed to "draw" the fluid/density field. Drag while your left mouse button is pressed to make the whole thing move, i.e. to "draw" the "forces" that you're adding to the fluid/density field. Press "r" to clear the screen and "m" to open the menu. Press "1" .. "8" to switch color presets. SPACE to pause. "s" to save a png or jpg. syfluid is written in C++ using OpenGL. Even though it is heavily performance optimized and using OpenGL Shading Language (GLSL), it is a performance hog. Use "f" to show the FPS. If they are lower than 30, then reduce the quality parameter that you find in the menu from 200 to e.g. 100. For very fast graphic cards, try 400 and above. This fluid simulation is based on on Jos Stam's paper: http://www.dgp.toronto.edu/people/stam/reality/Research/pdf/GDC03.pdf

The project has moved to github https://github.com/EnFlexIT/AgentWorkbench Agent.GUI is a simulation framework and toolkit based on the JADE framework. It provides functionalities for time aspects, agent-environment interaction, visualization and load balancing, Furthermore, the included application focuses the usability for end users.

AGISim is a framework for the creation of virtual worlds for artificial intelligence research, allowing AI and human controlled agents to interact in realtime within sensory-rich contexts. AGISim is built on the Crystal Space 3D game engine.

This software enable cannabis grower to manage and retrieve statistics about culture, tools included have the goal to help growing indoor cannabis.

It uses two different solutions: - placing of circles closest to the center from the largest to smallest, see brianshaler on github https://github.com/brianshaler/Circle-Packing-in-Processing - simulation "real" world with use of a Java Physics Engine JBox2D, see http://www.jbox2d.org

Formicidae is the official simulator and visualizer for the Ant-Wars competitive programming site, written in Java and SISC. The site is hosted at www.ant-wars.net.

Gene-Environment iNteraction Simulator 2 (GENS2) simulates interactions among two genetic and one environmental factor and also allows for epistatic interactions. GENS2 is based on data with realistic patterns of linkage disequilibrium, and imposes no limitations either on the number of individuals to be simulated or on number of non-predisposing genetic/environmental factors to be considered. The GENS2 tool is able to simulate gene-environment and gene-gene interactions. To make the Simulator more intuitive, the input parameters are expressed as standard epidemiological quantities. GENS2 is written in Python language and takes advantage of operators and modules provided by the simuPOP simulation environment. It can be used through a graphical or a command-line interface.

The Health Manager Java SDK is an interface definition to connect wireless medical devices with a Java application. It includes also an implementation that simulates real devices and a sample application demonstrating the usage.

A simple ICA model for UK non life insurance

JCreme is an automated interface to the CREME96 modeling web app (https://creme96.nrl.navy.mil/). It allows the user to send multiple requests to the CREME96 website and retrieve the results. CREME stands for "Cosmic Ray Effects on Micro Electronics"

MASyV (Multi-Agent System Visualization) enables one to write agent-based models/cellular automata, eg. in C, visualize them in real time & capture to movie file with MASyVs GUI & message passing lib. Includes examples: Hello World, ants, viral infection

MED-FOES is an implementation of a stochastic Agent-Based Simulation (ABS) system for analyzing demographic changes in a single population of Medfly (Ceratitis capitata) over time. The simulation currently takes population extinction as a given because it aims to give us better estimates of necessary quarantine lengths in areas where Medfly is not currently established but does repeatedly invade. Thus the objective of this software is to estimate the time to local extirpation based on known ranges of developmental, survivorship and reproductive parameters, as well as assumed ranges of an eradication pressure parameter. For a complete analysis and estimate of time to extirpation one would execute a large number of individual simulations evenly distributed over parameter space to estimate the time at which an arbitrary percentage of the simulations show extirpation.

Mesh2HRTF is an open-source project aiming at providing an easy-to-use software package for the numerical calculation of HRTFs. It targets researchers in the field of binaural audio. In a nutshell, Mesh2HRTF simply reads geometrical data, calculates the corresponding sound field and outputs HRTFs. To support multiple computer platforms, the concept of Mesh2HRTF is to focus on a command-line tool, which forms the numerical core, i.e., an implementation of the 3-dimensional Burton-Miller collocation BEM coupled with the multi-level fast multipole method (ML-FMM), and to provide add-ons for existing cross-platform applications for the preprocessing of geometrical data and for the visualization of results.

NeISS (National e-Infrastructure for Social Simulation) is a JISC funded project which will produce a platform for social simulation. Project Web site: http://www.neiss.org.uk

Pocket Cube J3D is a simulator of a Pocket Cube, in Java language and Java 3D graphics API. Java 3D is available at: http://www.oracle.com/technetwork/java/javase/tech/index-jsp-138252.html

This project at NICTA implements a broadcast routing protocol called Shortest Path Tree Broadcast (SPTB) under ns-2. This release also contains our implementation of a benchmark protocol called “TwoHop” which uses 2-hop neighbour information.

A utility for processing command line arguments

The Tomographic Image Reconstruction Interface of the Universite de Sherbrooke (TIRIUS) is a Qt-based user-interface software for reconstructing 3D images from data generated by real apparatus or generated by the GATE Monte Carlo simulator.

Ordinary Differential Equation (ODE) solver for Tcl. Handles both stiff and non-stiff sets of equations; does time-evolved initial value problems and root finding. Based on the popular Lawrence Livermore solver LSODE.

The TErminology for the Description of DYnamics (TEDDY) project aims to provide an ontology for dynamical behaviours, observable dynamical phenomena, and control elements of bio-models and biological systems in Systems Biology and Synthetic Biology.

VgaSim simulates a VGA screen connected to your VHDL and VeriLog design. Simulated signals from your desing will handle the virtual VGA screen such as it were real. VgaSim works with VHDL and VeriLog simulators such as ModelSim and GHDL.

AMICI, the Assessment platform for Multiple Interdependent Critical Infrastructures, simplifies and boosts experimentation with cyber-physical systems. AMICI enables the real-time execution of physical process models developed in Matlab Simulink, in a way that they can interact with real cyber systems, e.g., ad-hoc software or even real malware. The simulated physical models may come from a wide range of domains, e.g., power generation, power transmission, railway transportation, chemical processes. AMICI includes two main software units that have been developed in C# (Windows) and have been ported on Unix-based systems with the help of the Mono platform. AMICI has been primarily tested in FreeBSD-based systems. AMICI is developed by the European Commission's Joint Research Centre (JRC) For further documentation and acknowledgements please refer to http://ipsc.jrc.ec.europa.eu/?id=819