Search Results for "the command line" - Page 9
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Showing 346 open source projects for "the command line"
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This project aims to model parasites in order to assist in the analysis and prediction of their behavior.
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OnuriS (Open soURce wImax Simulator) is a simulation platform designed for WiMAX in order to analyze network performances and develop particular allocators for better bandwidth allocation strategies that could greatly improve the overall system.
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A 2-D inviscid flow and adjoint solver on unstructured triangular grids. It makes use of a vertex-centroid finite volume scheme which is second order accurate. The adjoint solver is developed using the automatic differentiation tool called TAPENADE. Code has been moved to https://github.com/cpraveen/euler2d
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MonteCarlo portfolio simulation - it can be used as stand-alone command line application - it takes simple XML file needed data as entry and creates simple XML file with output, also this stuff have JNI and ISAPI interface.
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The `Turing Machine Compiler Collection' (tmcc) contains a virtual machine which emulates a Turing Machine such as an assembler and a C-like compiler which assemble/compile the written code into the delta-notation.
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The SNP ratio test can assess significance of enrichment of significant associations in genome-wide association studies. Tests can be applied to pathways such as KEGG/GO, or user-defined pathways to test specific hypotheses. See link below for more.
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IFoam is an OpenFOAM derived framework. It uses Python programming language for definition of its API. Itegrates visual components for limited post-processing. Provides access to some GUI components for more efficient set up the simulation cases.
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Guanxi is a robust analysis and simulation application for Social Network Analysts. Guanxi allows researchers in the field to create, import, and export an endless array of networks, analyze their structure, and run custom dynamics over them.
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Translates OpenFOAM (Open Source CFD Toolbox, see http://sourceforge.net/projects/foam) data into MED format (see http://www.code-aster.org/outils/med). The initial goal to develop this utility was to be able integrate OpenFOAM functionality with SALOME
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simgi is a simulation engine for stochastic simulations of reactive systems using Gillespie's method written in Haskell.
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HOT is a package of Matlab and Octave compatible functions that manage thermodynamic data for a wide range of species. Functions calculate almost all the most common thermodynamic quantities of mixtures. Python users may also want to look at PYroMat at https://chmarti1.github.io/PYroMat/index.html
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This easy to run and change program for developers, it contains several evolutionary based strategies allowing you try among some function samples
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BARNACLE is a Python library for RNA 3D structure prediction. It can be used for probabilistic sampling of RNA structures that are compatible with a given nucleotide sequence and that are RNA like on a local length scale.
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SystemML is an XML format for exchange of mathematical systems for numerical simulation. This toolbox offers support for the SystemML infrastructure. It is included in the distributions of SystemML execution clients, but can be installed separately.
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CellMC is a multi-platform XSLT-based SBML compiler producing executable SSA models based on the optimised direct method.
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Neurospaces is a development center for tools in computational neuroscience. See http://www.neurospaces.org/
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C++ project to read the Nastran card (Buld file + f06 + punch file). Additionnal class to manage the nastran files
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XML based parsers and translation tools for electronic design automation (EDA). Tools for manipulating netlist formats (e.g. SPICE, Spectre, CDL), languages (e.g. Verilog-AMS, VHDL-AMS, ASM), and other useful text-based formats (e.g. Liberty, Gerber).
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Spasmos is a Python package that allows scientists to simulate the dynamics of highly collisional plasmas using a number of numerical methods.
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ALC (Automated Layer Construction) is a computer program that highly simplifies the building of reduced modular models of signaling systems, according to the layer-based approach.
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A verilog language compiler written using Java and JavaCC. It produces a netlist, an ascii text file, of all the cell connections. It can compile very large circuits comprised of many modules.
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f14tosqlite - Urqmd to SQLite convertor. A convertor to convert UrQMD F14 simulation file to a sqlite database. Database is organized in 3 tables: events ; frames ; particles