Showing 1979 open source projects for "gnu/linux"

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  • 1
    CyberUnits

    CyberUnits

    Class library for computational cybernetics

    CyberUnits is a cross-platform class library for rapid development of high-performance computer simulations in life sciences. It supports modelling for biomedical cybernetics and systems biology with Object Pascal.
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  • 2
    Torque-free rotation simulator
    Solid body rotation simulator in free space.
    Downloads: 0 This Week
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  • 3
    Tellurium

    Tellurium

    Model, simulate, and analyze biochemical systems using one tool.

    Tellurium (te.) is a Python environment supporting Spyder2 IDE and Jupyter Notebook aimed for large-scale systems and synthetic biology simulation. It combines a number of existing libraries, including libSBML, libRoadRunner (including libStruct), libAntimony, and is extensible via tePlugins. In addition other tools kits such as matplotlib and NumPy are used to provide additional analysis and plotting support.
    Downloads: 0 This Week
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  • 4

    LINE Solver

    Queueing Theory Algorithms

    LINE is an open-source software package to analyze queueing models via analytical methods and simulation. The solver is available for Java/Kotlin, MATLAB, and Python. LINE features algorithms for the solution of open queueing systems (e.g., M/M/1, M/M/k, M/G/1, ...), open and closed queueing networks, and layered queueing networks. Additional details are available on the project website: http://line-solver.sf.net.
    Downloads: 0 This Week
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  • 5
    GNNPCSAFT Chat

    GNNPCSAFT Chat

    Chatbot with GNNPCSAFT

    The GNNPCSAFT Chat is an implementation of our project that focuses on using Graph Neural Networks (GNN) to estimate the pure-component parameters of the Equation of State PC-SAFT. We developed this app so the scientific community can access the model's results easily. In this app, you can chat with LLM models (Gemini or Ollama) with GNNPCSAFT tools, allowing you to ask questions about the PC-SAFT parameters of various compounds, predict thermodynamic properties, and get insights into the...
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  • 6

    Popppy

    Population Propogation in Python. Simulate births, marriages, deaths

    ...The tool could also be useful and fun for a student, for anyone curious about near-future demographics or CO2 emissions, or curious amateurs. Since it's Open Source (<2000 lines of Python code) you can make your own changes. It runs from the command line and should run on any (MS WIndows, Linux/Unix/Mac OSX) platform running Python 3. A non-Python MS Windows pre-compiled Popppy executable/binary is included for those who just want to run it without having the bother of installing Python 3.x or not wanting to change the source code.
    Downloads: 0 This Week
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  • 7
    SimulaBeta

    SimulaBeta

    A simulation program for insulin-glucose homeostasis.

    SimulaBeta is a simulation program for insulin-glucose feedback control. It is based on a nonlinear MiMe-NoCoDI model.
    Downloads: 0 This Week
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  • 8
    GNNPCSAFT Web App

    GNNPCSAFT Web App

    Smart Thermodynamic Modeling with Graph Neural Networks

    The GNNPCSAFT Web App is an implementation of our project that focuses on using Graph Neural Networks (GNN) to estimate the pure-component parameters of the Equation of State PC-SAFT. We developed this app so the scientific community can access the model's results easily. In this app, the estimated pure-component parameters can be used to calculate thermodynamic properties and compare them with experimental data from the ThermoML Archive. More info on github repository.
    Downloads: 0 This Week
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  • 9

    libCIGI

    C++ Library for the Common Image Generator Interface

    libCIGI (library for Common Image Generator Interface) is a lightweight header only library that provides interfaces for communication between CIGI hosts and image generators. Currently versions 3.0, 3.2 and 3.3 are supported as well as support for the *draft* V4.0 CIGI standard. Additional functionality to the base packet interfaces is provided through external classes so that to the packet headers have no further dependencies. Packet processing is kept simple and a couple of simple helper...
    Downloads: 0 This Week
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  • 10
    Eleana

    Eleana

    Program for the analysis of spectroscopic data, in particular EPR(ESR)

    Eleana is a program for manipulating, modifying and analyzing various spectroscopic data, in particular electron paramagnetic resonance spectra. It allows you to import data from Bruker spectrometers such as Elexsys or EMX and data from any ASCII file or imported from the clipboard. The program is under constant development, but already has many functions implemented for spectral analysis. Some of the basic functions include: baseline corrections, filtering, spectral clipping, integration /...
    Downloads: 0 This Week
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  • 11
    water_hammer_simulation

    water_hammer_simulation

    A Qt application for water hammer simulation.

    With differents numerical methods this application simulate the water hammer phenomenon.
    Downloads: 14 This Week
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  • 12

    Genetic algorithm for EOM

    A python GA code for EOM in SAXS/WAXS

    Because GAjoe of ATSAS cannot deal with WAXS range, and no parameters can be modified. I made a code by myself to use GA for finding best EOM for SAXS/WAXS. The project need ATSAS crysol and a folder with multiple pdb files to use.
    Downloads: 0 This Week
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  • 13
    ALAMODE

    ALAMODE

    Ab initio simulator for thermal transport and lattice anharmonicity

    ALAMODE is designed for analyzing lattice anharmonicity and lattice thermal conductivity of solids. By using an external DFT package such as VASP and Quantum ESPRESSO, you can extract harmonic and anharmonic force constants straightforwardly with ALAMODE. Using the anharmonic force constants, you can also calculate lattice thermal conductivity from first principles. For more information about ALAMODE, please visit the following webpages: Documentation :...
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    Downloads: 4 This Week
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  • 14
    DeepSee

    DeepSee

    Visualize deep ocean biogeochemical sediment samples in 2D and 3D!

    DeepSee is an interactive workspace for deep ocean scientists to upload sediment core data and map images and see their sampling history displayed across multiple connected views at once! 🦑🦀🐚 🚀 For a live demo, visit: https://www.its.caltech.edu/~datavis/deepsee/ 🌱 To get started, visit our Wiki: https://sourceforge.net/p/deepsee/wiki/Home/ 🧑‍💻 To modify DeepSee for your own project, visit our GitHub repository: https://github.com/orphanlab/DeepSee/ --- Created by Adam Coscia,...
    Downloads: 0 This Week
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  • 15

    adevs

    A simulation library for discrete event and hybrid dynamic systems.

    Adevs is a C++ library for building discrete event and mixed discrete event/continuous simulations. This repository is defunct. We have moved to https://github.com/smiz/adevs
    Downloads: 1 This Week
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  • 16
    Java application for virtual tool shop simulation. Application allows simulation of exchange jobs between some tool shops. Jobs are grouped in projects and are organized in Petri nets (sequences of activities and stores).
    Downloads: 0 This Week
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  • 17
    Manikin
    A very simple java simulation of the human body to simulate a 3D drawing manikin,with plenty of freedom of movements of the limbs and rotation of the body to implements a 360 degrees view.Source code available.No openGL.Improvements to come !
    Downloads: 0 This Week
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  • 18
    IF97

    IF97

    Water & steam properties Java library

    Steam tables for industrial use according to the international standard for the properties of water and steam, the IAPWS-IF97 formulation and the international standards for transport and other properties. Hummeling Engineering BV develops engineering software in the fields of thermodynamics, mechanics, hydrodynamics, and digital signal processing.
    Downloads: 1 This Week
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  • 19
    MathLabTool

    MathLabTool

    math,simulation,graphics

    Provide convenient tools for mathematical related experiment, simulation, graphics and other requirements.
    Downloads: 0 This Week
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  • 20
    Hermes -- a set of libraries and tools for the support of scientific simulation and data archival.
    Downloads: 0 This Week
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  • 21
    Ion Beam Simulator
    Library for ion optics, plasma extraction and space charge dominated ion beam transport.
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    Downloads: 13 This Week
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  • 22
    The Systems Biology Format Converter (SBFC) is a Java generic framework aiming to translate any systems biology model format into another. The SBFC Web Site providing detailed feature description and instructions for installing, using and developing new modules is: http://sbfc.sourceforge.net/ . Currently, SBFC allows the user to convert SBML models into the formats: BioPax, Matlab, Octave, XPP, DOT, and SBGN. Due to its modular design fast development and addition of new converters...
    Downloads: 0 This Week
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  • 23

    Octave Wrapper CoolProp Library

    Octave Wrapper CoolProp Library linked to win32 and win64

    Octave Wrapper CoolProp Library linked to win32 and win64
    Downloads: 0 This Week
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  • 24

    Liquid rocket engine parameter solver

    This is the liquid rocket engine parameter solver Alpha release 1.

    This is the liquid rocket engine parameter solver Alpha release 1 which is the first version for this project. This first version will help to find thrust values by giving some values to the system
    Downloads: 0 This Week
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  • 25

    ntx

    Neutrality tests using the SNP site frequency spectrum

    Tests on "neutrality" are designed to detect systematic deviations from chance patterns in genetic data. This tool computes for a given SNP site frequency spectrum some standard test statistics like Tajima's D, Fay & Wu's H, etc. Additionally, the user may adapt the tests to specific demographies by specifying non-standard first and secondary moments. These can be obtained e.g. from simulations.
    Downloads: 0 This Week
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