Showing 153 open source projects for "paper"

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  • 1
    PaperQA2

    PaperQA2

    High accuracy RAG for answering questions from scientific documents

    PaperQA2 is a package for doing high-accuracy retrieval augmented generation (RAG) on PDFs or text files, with a focus on the scientific literature. See our recent 2024 paper to see examples of PaperQA2's superhuman performance in scientific tasks like question answering, summarization, and contradiction detection. In this example we take a folder of research paper PDFs, magically get their metadata - including citation counts and a retraction check, then parse and cache PDFs into a full-text search index, and finally answer the user question with an LLM agent.
    Downloads: 6 This Week
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  • 2
    ScholArxiv

    ScholArxiv

    ScholArxiv is an open-source aesthetic and minimal app

    ScholArxiv is an open-source, aesthetic and minimal app that allows users to search, read, bookmark, share, download, and view summaries of academic papers from the arXiv repository. Now you can configure your Gemini API key and converse with AI to expand and dive deeper into the papers you're exploring.
    Downloads: 66 This Week
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  • 3
    PDFMathTranslate

    PDFMathTranslate

    PDF scientific paper translation with preserved formats

    PDFMathTranslate is a Python-based tool that uses AI translation to convert academic PDFs into bilingual (e.g. Chinese-English) documents while preserving formatting, including math notation. It supports OCR-enhanced content and offers CLI, GUI, Docker, and Zotero integration under AGPL v3.
    Downloads: 35 This Week
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  • 4
    Watchy

    Watchy

    An open source E-ink smartwatch

    Watchy, an open-source E-Ink smartwatch. Watchy is an E-Paper watch with open-source hardware and software. It has a barebones design utilizing the PCB as the watch body, allowing it to be worn as-is, or further customized with different 3D printed cases and watch straps. It is a unique timepiece that is also a wearable development platform, allowing users to create their own experience. Ultra-low-power e-paper 1.54″ display with 200 x 200 resolution and wide viewing angle. ...
    Downloads: 0 This Week
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  • 5
    OpenFermion

    OpenFermion

    The electronic structure package for quantum computers

    ...Among other functionalities, this version features data structures and tools for obtaining and manipulating representations of fermionic and qubit Hamiltonians. For more information, see our release paper. Currently, OpenFermion is tested on Mac, Windows, and Linux. We recommend using Mac or Linux because the electronic structure plugins are only compatible on these platforms. However, for those who would like to use Windows, or for anyone having other difficulties with installing OpenFermion or its plugins, we have provided a Docker image and usage instructions in the docker folder. ...
    Downloads: 6 This Week
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  • 6
    Algebraic graphs

    Algebraic graphs

    Algebraic graphs

    Alga is a library for algebraic construction and manipulation of graphs in Haskell. See this Haskell Symposium paper and the corresponding talk for the motivation behind the library, the underlying theory and implementation details. We can give semantics to the constructors in terms of the pair (V, E) of graph vertices and edges. Alga can handle graphs comprising millions of vertices and billions of edges in a matter of seconds, which is fast enough for many applications.
    Downloads: 1 This Week
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  • 7
    mTRF-Toolbox

    mTRF-Toolbox

    A MATLAB package for modelling multivariate stimulus-response data

    ...It can be used to model the functional relationship between neuronal populations and dynamic sensory inputs such as natural scenes and sounds, or build neural decoders for reconstructing stimulus features and developing real-time applications such as brain-computer interfaces (BCIs). Toolbox Paper: http://dx.doi.org/10.3389/fnhum.2016.00604 Methods Paper: https://doi.org/10.3389/fnins.2021.705621
    Downloads: 11 This Week
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  • 8

    MatCont

    Numerical Bifurcation Analysis Toolbox in Matlab

    ...Leaders of the project are Willy Govaerts (Gent,B) and Yuri A. Kuznetsov (Utrecht,NL) and Hil G.E. Meijer (UT, Enschede, NL). Matcont for ODEs and MatcontM for Maps Publishing a paper using our software? That's great. Please do us a favour and cite: New features of the software MatCont for bifurcation analysis of dynamical systems. A. Dhooge, and W. Govaerts, Yu.A. Kuznetsov, H.G.E. Meijer and B. Sautois, MCMDS 2008, Vol. 14, No. 2, pp 147-175 In case you're stuck, use the forum, but to get a good answer provide: 1. ...
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    Downloads: 150 This Week
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  • 9
    Pen Possible

    Pen Possible

    scans a given textual string in 146 pen on paper possible combinations

    Application scans a given textual string in 146 pen on paper possible combinations- horizontal, vertical, diagonal, reverse, join top, join bottom, groups(2/3/4..), edges & in quadrant dimensions of your choice
    Downloads: 0 This Week
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  • 10
    Eventer

    Eventer

    Rapid, unbiased, reproducible analysis of synaptic events

    ...The software is coded in MATLAB, but has been compiled as standalone applications for Windows, Mac and Linux. Please visit the official Eventer website for more info https://eventerneuro.netlify.app/ While the paper is in preparation, please cite as; Winchester, G., Liu, S., Steele, O.G., Aziz, W. and Penn, A.C. (2020) Eventer. Software for the detection of spontaneous synaptic events measured by electrophysiology or imaging. http://doi.org/10.5281/zenodo.3991676
    Downloads: 6 This Week
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  • 11

    multinotes

    Text architecture for music theory.

    The text structures of notes and publications in music theory and musical analysis bring challenging requirements: how to include music notation excerpts, graphics, and even combinations thereof, into the typeset flow of paragraphs and into the work-flow, and how to integrate navigable references to these and to single domain entities into running text. Furthermore, dynamic interactive documents can be useful for presenting complicated interdependencies to the reader more clearly, far beyond conventional paper publication. The mulitNotes text architecture and processing pipeline is based on d2d and standard technologies (XSLT, ECMAScript. LilyPond, PostScript, etc.) and addresses these issues. An overview about the software architecture and its operation is given in: Journal of the Text Encoding Initiative, Open Issue 18/2024: "Using d2d for Writing XML --- The multiNotes Text Architecture for Musical Analysis" https://doi.org/10.4000/132ex
    Downloads: 0 This Week
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  • 12
    illness index

    illness index

    illness_index A Computer Program of a Medical Textbook.

    A computer scientist has attempted to program a textbook of British general practice (primary care) medicine, that is, Hodgkin K (1978) "Towards Earlier Diagnosis....", 4th Edition, Churchill Livingstone. If a patient types presenting findings (such as headache, cough), the program prompts the user for expansion/denial of appropriate findings, in order to construct a list of patient findings. The program also calculates a list of likely diseases, which the user can use the web to find out...
    Downloads: 4 This Week
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  • 13

    GRAMPC

    A gradient-based augmented Lagrangian framework for embedded NMPC

    ...More details about the algorithm and its performance can be found in the corresponding article published in Optimization and Engeneering. The article is available online under open access at: https://doi.org/10.1007/s11081-018-9417-2. Please cite the paper when you are using results obtained with GRAMPC.
    Downloads: 0 This Week
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  • 14
    Ket

    Ket

    An algebra editor

    A text editor for maths. Simple algebra should be faster and more intuitive to perform on a computer than on paper and should look like maths. Write small fragments in plain text; perform simple click-and-drag algebra with the mouse; and explore more involved algebra through keyboard shortcuts. When done, save as plain text files or export to LaTeX and HTML.
    Downloads: 0 This Week
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  • 15
    SecurePose

    SecurePose

    Automated Face Blurring, Kinematics Extraction and Leg dystonia Dx

    ...For installation, https://www.rishabh-bajpai.com/secureposeinstallation Tutorial Videos https://www.youtube.com/playlist?list=PLO4_jCYO5Ib23MoBpn-Wpj1_b6DAYlDwk Please cite the paper: https://arxiv.org/abs/2402.14143
    Downloads: 0 This Week
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  • 16
    Euler Pole Calculator (EPC)

    Euler Pole Calculator (EPC)

    A Matlab software to estimate Euler pole parameters

    ...Evaluating Euler Pole Parameters for the North American Terrestrial Reference Frame of 2022". Geodesy and Geodynamics. DOI: 10.1016/j.geog.2025.03.004. * The element G_23 of the Jacobian matrix of linearized observations in formula 18 (page 4) in this paper has an incorrect sign (minus sign should be removed). This is discussed in: https://doi.org/10.1007/s10291-025-01932-7.
    Downloads: 0 This Week
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  • 17
    DeepSee

    DeepSee

    Visualize deep ocean biogeochemical sediment samples in 2D and 3D!

    DeepSee is an interactive workspace for deep ocean scientists to upload sediment core data and map images and see their sampling history displayed across multiple connected views at once! 🦑🦀🐚 🚀 For a live demo, visit: https://www.its.caltech.edu/~datavis/deepsee/ 🌱 To get started, visit our Wiki: https://sourceforge.net/p/deepsee/wiki/Home/ 🧑‍💻 To modify DeepSee for your own project, visit our GitHub repository: https://github.com/orphanlab/DeepSee/ --- Created by Adam Coscia,...
    Downloads: 1 This Week
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  • 18

    ViReMa

    Viral Recombination Mapper

    ViReMa (Viral Recombination Mapper) detects and reports recombination or fusion events in virus genomes using deep sequencing datasets. Feb 2014 - Our paper (Open Access) is available at Nucleic Acids Research: "Discovery of functional genomic motifs in viruses with ViReMa–a Virus Recombination Mapper–for analysis of next-generation sequencing data" http://nar.oxfordjournals.org/content/42/2/e11 This is an on-going project and updates will be regularly posted. Please get in touch with any questions, problems or suggestions.
    Downloads: 1 This Week
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  • 19

    Discursive Dilemma

    Optimal Decision Rules for the Discursive Dilemma

    Accompanying software for the paper "Optimal Decision Rules for the Discursive Dilemma", by A. Alabert, M. Farré and R. Montes (https://arxiv.org/abs/2210.13100). Computes a ranking of the best decision rules according to a quantitative criterion based on the minimisation of the combined probabilities of false positives and false negatives
    Downloads: 0 This Week
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  • 20
    StochSD

    StochSD

    CSS package for contin., discrete and combined modelling & simulation

    ...StochSD eliminates the many problems and errors from modelling discrete objects as continuous. This means that the results from CSS and DES modelling now can be fully consistent. (See the paper "The Full Potential of Continuous System Simulation Modelling" by Gustafsson L & Sternad M.) In particular, StochSD includes features for stochastic modelling and post analysis of multiple simulations followed by presentation of the results in statistical form. Tools for Sensitivity Analysis, Optimization and Statistical Analysis are parts of StochSD.
    Downloads: 12 This Week
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  • 21
    ...See the Wiki page for a description of the math conjecture. https://en.wikipedia.org/wiki/Collatz_conjecture The program tests a number of ways for researching various patterns. A white paper is included that describes various results of the research. Also included are a number of data files of results of the program.
    Downloads: 0 This Week
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  • 22
    Virtual Reflectometer

    Virtual Reflectometer

    Simulates basic reflectometer scans with X ray tracing.

    ...With this program, you can characterize reflectometers and get a reflectometer-dependent overillumination correction for X Ray Reflectivity (XRR) scans. The pogram serves as an educational tool for explaining alignment and for a proper overillumination correction of XRR data. !!Paper will be referenced!!. VR can be run by code in Matlab or as a standalone app. It's not necessary to have Matlab installed on your computer if you want to use the standalone app (Download button). You can find a documentation in the wiki tab. The program is freshly released. So feedback is very welcome in order to improve it. ...
    Downloads: 0 This Week
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  • 23
    StatisticsTables

    StatisticsTables

    This is a Java APP for Probability and Statistics Tables

    If you have Windows or a MAC , you can setup and run Statistics Tables with very little effort. You can use jdistabs in place of paper Probability Tables to get electronic probabilities. You can also download the Java code used to create this APP. There are 2 zips. One is for a working windows APP, and the other with complete code and file structure. I used Eclipse to develop the APP. Click the link you want to download to get the Statistics Tables Windows.exe or OS X zipped files. ...
    Downloads: 0 This Week
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  • 24

    DeepScaleTool

    Estimation of deep-submicron technology scaling

    ...Please make sure you enable macros while opening the DeepScaleTool.xlsm file. This tool was developed by Satyabrata Sarangi and Dr. Bevan Baas at UC Davis. This work was presented at 2021 IEEE ISCAS. To cite the paper - https://ieeexplore.ieee.org/abstract/document/9401196 S. Sarangi and B. Baas, "DeepScaleTool: A Tool for the Accurate Estimation of Technology Scaling in the Deep-Submicron Era," 2021 IEEE International Symposium on Circuits and Systems (ISCAS), 2021, pp. 1-5, doi: 10.1109/ISCAS51556.2021.9401196.
    Downloads: 19 This Week
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  • 25
    ...If you have any questions, please contact Shengmin Zhou(email: 2495077522@qq.com or 220180304@seu.edu.cn). If you want to download this project and use it, please cite the paper: Zhou, S., Li, B. & Nie, H. Parametric fitting and morphometric analysis of 3D open curves based on discrete cosine transform. Zoomorphology (2021). https://doi.org/10.1007/s00435-021-00520-w
    Downloads: 0 This Week
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