Search Results for "gnu linux" - Page 78
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Showing 7565 open source projects for "gnu linux"
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alnfix
Program to fix issues with helicos bam files.
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This is a simple software for performing various statistical and mathematical operations on single ASCII data-files. Entire file is read into an array, which is then analyzed. Number of columns is detected automatically.
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x2fasta
Tools for reformatting common sequence formats into fasta
A collection of tools to transform common biosequence formats (e.g. EMBL, SWISS-PROT, UniProtKB, GenBank and RefSeq) into the fasta sequence format. -
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SalStat is a small application for statistical analysis emphasising the sciences and social sciences (particularly Psychology). The project is designed around the user interface which has been designed to be simple to use. Think SPSS, but better!
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WARNING: Project moved to http://github.com/scemama/irpf90 IRPF90 is a Fortran90 preprocessor written in Python for programming using the Implicit Reference to Parameters (IRP) method. It simplifies the development of large fortran codes in the field of scientific high performance computing.
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meteosatool
MeteosatTool is for visualization and processing meteo satellite image
MeteosatTool is a program for visualization and processing of data from Meteosat Second Generation (MSG) geostationary meteorological satellite, and output data of SAFNWC, the Satellite Application Facilities for NoWCasting and very short range forecasting software package -
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Linux Guist - Multi Lingual OS for Asia
A Single Click Language Changer and Publishing System for Web and DTP
Linux Guist - is a Multi Lingual Live CD OS for most Asian Languages, with the ability to run of a CD & Old Hardware, with just 128 MB Memory, for DTP, Web Publishing & Data Entry purposes. This will help IT employers to take up Govt. Projects that require Data Collection, Entry & Publishing at a very very low cost, while providing Training & Job Opportunities to numerous students of these languages, in the various towns, of the country. Talk to your respective IT/HRD ministry to identify... -
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MolSig
The Stereo Signature Molecular Descriptor
An algorithm to compute molecular graph descriptors considering the stereochemistry of the molecular structure, based on our previously introduced signature molecular descriptor. The algorithm can generate two types of descriptors, one which is compliant with the Cahn-Ingold-Prelog priority rules, and a faster one based on our previous definition of a directed acyclic graph that isaugmented to a chiral molecular graph. -
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ExactCalc
Software for exact computing based on interval arithmetic.
1/3 is not 0.33. Pi is not 3.14. Actually 1/3 is in interval [0.33, 0.34] and pi is in interval [3.14, 3.15]. During computation truncating error is accumulating. At end of computation it is needed to know real boundaries of result. The solution is given by interval arithmetic. Simply speaking, because 1/3 is in interval [0.33, 0.34] and 1/7 is in interval [0.14, 0.15], value 1/3 - 1/7 must be in [0.18, 0.2]. Computation can be arbitrary long and complex but interval arithmetic gives... -
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Arcadia is a light-weight, cross-platform, C++ desktop application designed for visualizing biological networks such as metabolic pathways.
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The software is developed for calculations of hierarchy big circuits by methods of the tensor analysis of networks and diakoptic. It is planned also to application for joint calculation of circuits and the fields presented by electrical equivalent circuits. For input of circuits editor KiCAD is used.
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EmulMultiFit
Simultaneously fit SAS data with polydisperse core-shell-shell spheres
Keywords: -simultaneously fit several SAXS and SANS data sets with polydisperse (Schultz-Zimm or Gaussian distribution f(R)) spherical core-shell-shell nanoparticles -analytical expressions are used for from factor F(Q) and its integral over f(R), no numerical integration required -absolute units -Mathematica is required via console (MathKernel) -Mathematica's local and global optimizers (simulated annealing, differential evolution, Nelder-Mead, ...) can be used -range for fit... -
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GC-EAD is software for acquiring and evaluating gas chromatograph (GC) electro-antennographic detection (EAD) data for use in insect research.
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An object oriented Math library written in C++. This library contains set of template classes that are ready to be used. Currently a 2D Matrix, modular arithmetic, vector, and complex numbers are present. These systems can work together, you can create a matrix of complex numbers. Iterators for matrix and vector classes will be added soon. Please use SVN to access current version.
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Average
Command-line calculator of basic statistics.
Average is a simple and fast command-line Perl utility for calculating basic statistics on a list of numbers (one number per line). It works as a traditional Unix filter and can be used as part of those greatly useful chains of piped commands. It calculates average (arithmetic mean), standard deviation, median, total sum, minimum and maximum values present, and shows the number of processed numbers. Entry can by a text file (any column can be specified, default is the first) or... -
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coalescent
Software tool for Research in Computational Population Genetics
Development of exact and approximate methods (Importance Sampling and MCMC based) for computing likelihoods under the standard population genetic models of mutation,migration & recombination. Project issues are mainatined at https://freecode4susant.atlassian.net/browse/COALESCENT -
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JBernstein
JBernstein: Exploration techniques for non-linear constraint checking
JBernstein is a tool implemented in Java that enables to check whether a polynomial constraint holds for all variables within their domain. It is mainly used in the verification or synthesis of cyber-physical systems where the system model is nonlinear. The tool also supports specifications in assume-guarantee style. The underlying algorithm is based on a translation to Bernstein polynomials, and several optimization techniques are implemented to ensure efficiency. Concerning performance,... -
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Elastic network models (ENMs) have been shown to generate the dominant functional equilibrium motions of biomolecules quickly and efficiently. MAVEN simplifies ENM generation, allows for diverse models to be used, and facilitates useful analyses.
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Sistema de administración para laboratorio Bioquímico
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MIST
A MATLAB toolbox to simulate optical systems
Modal Interferometer Simulation Tool (MIST) is a MATLAB toolbox that can simulate arbitrary resonant optical systems in the paraxial beam approximation. It allows the user to define any optical setup (composed typically of laser sources, mirrors, lenses, electro-optical modulators and detectors) and to compute the static laser field at any point. It uses a Hermite-Gauss modal decomposition to simulate diffraction limited optics. This tool is being developed mainly for simulation of large... -
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ciGen
ciGen is a short C++ code to generate cohesive interface elements.
Cohesive zone model (CZM) is a powerful method to study many cracking phenomena. Cohesive interface elements constitute a simple to implement yet valuable tool to implement CZM. This project provides a simple C++ code that reads a finite element mesh, modify it and generate cohesive interface elements where needed. It can read Gmsh (http://geuz.org/gmsh/) or ABAQUS input files and write the mesh to any format such as ABAQUS and jive (http://www.dynaflow.com/en_GB/jive.html). The code was... -
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PlaTypUS
Plasmodium Typing Utility Software
The goal of PlaTypUS is to establish a unified Plasmodium whole genome analysis tool, that aligns short read sequences in an agreed upon manner, with many quality control steps, and calls both SNVs and CNVs in a community agreed standard way. We also seek to provide this analysis in a stand-alone graphic user interface so that labs around the world can analyze their own whole genome sequencing data, rather than relying on outside institutes. -
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To design a complete, wheeled robot, capable of accomplishing simple tasks, manipulate objects and have human interaction capabilities. Includes electronic board design, firmware and AI programming, computer-robot interaction software and mechanics.
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DICE is a Discrete Integrated Circuit Emulator. It emulates computer systems that lack any type of CPU, consisting only of discrete logic components.
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