Showing 751 open source projects for "simple java code"

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  • 1

    Deem

    Analyze time-course data with significance tests, clustering, modeling

    Use statistical methods to analyze time-course data (gene expression microarray and RNA-seq data in particular, but not limited to). Apply significance tests to filter out only significant genes or time series. Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional...
    Downloads: 0 This Week
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  • 2
    CIG-P

    CIG-P

    CIG-P is a simple yet flexible data visualization tool

    CIG-P is a higher order visualization tool for AP-MS which generates intuitive circular diagrams for visually appealing final representation of AP-MS data. CIG-P can be used to compare a) different AP-MS datasets of various baits or b) a particular bait under various perturbations (lenticular section CIG-P). The output of CIG-P is a simple and intuitively easy to grasp visualization of a complex dataset. Publication: CIG-P: Cicular Interaction Graph for...
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  • 3

    IQuant

    A pipeline for quantitative proteomics based upon isobaric tags

    IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by...
    Downloads: 0 This Week
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  • 4

    SSWAP

    Simple Semantic Web Architecture and Protocol

    SSWAP (Simple Semantic Web Architecture and Protocol; pronounced "swap") is an architecture, protocol, and platform that uses reasoning to semantically integrate disparate data and services on the web. Running live at http://sswap.info.
    Downloads: 0 This Week
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  • 5
    LARS
    LARS (Lightning Assessment of Risk for a Structure). LARS is a simple tool for the lightning assessment of risk for a structure, according to standard IEC 62305-2, second edition.
    Downloads: 6 This Week
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  • 6

    SimpleFB_GA

    a simple genetic algorithm written in FreeBasic

    a FreeBasic-written Genetic Algorithm code is here deployed
    Downloads: 0 This Week
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  • 7
    The National Library of New Zealand's Metadata Extraction Tool automatically extracts preservation-related metadata from digital files, then output that metadata in XML formats. It can be used through a graphical user interface or command-line interface. Please take the latest code from 'https://github.com/DIA-NZ/Metadata-Extraction-Tool.git'. The code on source forge will not be updated henceforth as it is moved to github.
    Downloads: 6 This Week
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  • 8
    Graphical Grammar Studio

    Graphical Grammar Studio

    An user friendly grammar tool for natural language processing tasks

    Full documentation with tutorials is included in the download package. Graphical Grammar Studio is a tool for applying grammars which behave as words acceptors/consumers and annotators. GGS grammars can be used to find and annotate sequences of words which respect certain conditions, in a given input. Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited...
    Downloads: 0 This Week
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  • 9

    NLFormatter

    Tool to format NetLogo code

    ***** Discontinued (may still work but will not be updated and supported anymore) ***** This formats NetLogo code that every block of code is written in a separate line. This makes the code clearer and is a pre-work for a Pseudo-Debugger running the model line-by-line. This work is in development status.
    Downloads: 0 This Week
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  • 10

    Curvilinear and Rectilinear Motions

    Simple physics simulation of Curvilinear and Rectilinear Motions

    This project has the role of simulating simple Curvilinear and Rectilinear Motions with an easy to use user interface. This program can be used for educational purposes as well as for any other purpose anyone would like. The executable file is a .jar files which means that it can run in any operating system that supports java. Above you can see a screenshot of the program while it is operating.
    Downloads: 0 This Week
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  • 11
    Temperature converter 4 java

    Temperature converter 4 java

    A java program to convert temperatures

    This program has an educational purpose only. It demonstrates a very simple application to convert temperatures between Celsius, Kelvin and Fahrenheit scales
    Downloads: 0 This Week
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  • 12
    ciGen

    ciGen

    ciGen is a short C++ code to generate cohesive interface elements.

    Cohesive zone model (CZM) is a powerful method to study many cracking phenomena. Cohesive interface elements constitute a simple to implement yet valuable tool to implement CZM. This project provides a simple C++ code that reads a finite element mesh, modify it and generate cohesive interface elements where needed. It can read Gmsh (http://geuz.org/gmsh/) or ABAQUS input files and write the mesh to any format such as ABAQUS and jive (http://www.dynaflow.com/en_GB/jive.html). ...
    Downloads: 0 This Week
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  • 13
    Open HLA (oh-la) provides an open-source implementation of the HLA RTI spec 1.3, IEEE 1516 and IEEE 1516 Evolved. It also provides a framework to wrap the standard RTI classes and FOM to code generation to make life simpler.
    Downloads: 0 This Week
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  • 14
    "ncdr2cnc" - N/C Drill to CNC code (G-Code) is the simple utility, which converts N/C drill files to G-Code files (adopted to Turbo CNC).
    Downloads: 2 This Week
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  • 15

    JCycles

    [frozen] A library for computing cycles in graphs or in Java code.

    [This project is frozen, but has an offspring with more features: https://github.com/jeffhain/jadecy ] JCycles provides treatments to compute cycles, or just strongly connected components, in directed graphs in general, or in classes or packages dependencies graphs parsed from class files (major version <= 51, else does best effort). It uses Tarjan's algorithm for SCCs, and Johnson's for cycles, with continuations instead of recursion, which allows to handle large graphs (<...
    Downloads: 0 This Week
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  • 16
    PHDL

    PHDL

    An HDL alternative to PCB graphical schematic capture tools.

    ...We believe the use of an HDL is also the way of the future when it comes to PCB design. The PHDL compiler automatically supports the output of PADS and Eagle netlists, and through extending a simple java class, users can generate a netlist in practically any format required by their choice of a layout tool.
    Downloads: 0 This Week
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  • 17
    Conceptpower

    Conceptpower

    Conceptpower is an authority file service.

    Conceptpower is an authority file service, which is based on WordNet 3.0 (http://wordnet.princeton.edu) and can be extended as needed. Each entry in Conceptpower is identified by an URI, which should be used to refer to a particular entry. Conceptpower has three parts: a public search function, a management component, and a basic REST interface. The public search function provides the user with basic search functionality. The management component provides a simple user management, and term...
    Downloads: 0 This Week
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  • 18
    JinnIde is a plugin that allows using Jinni Prolog, now also hosted here on this site (with open source license!), within the confines of an IDE integrated in JEdit.
    Downloads: 0 This Week
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  • 19

    SIMtoEXP

    For comparison of simulation and experimental scattering data

    SIMulation to EXPeriment is software that allows the direct comparison of simulation density information with that obtained from X-ray and neutron scattering experiments, by converting the simulation data to form factors. It also calculates volume probability distributions according to a space filling volumetric model. Written in C++ and Qt, SIMtoEXP has a very simple and easy to use GUI with interactive plotting. The software was originally developed by Norbert Kucerka. The code has been tested on OpenSUSE and Ubuntu (both binary and compilation); Windows and Mac are not officially supported, see the 'Notes' in the tar. PLEASE READ THE WIKI FOR THE MOST UP-TO-DATE INFORMATION - there have been major bug fixes recently.
    Downloads: 0 This Week
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  • 20
    Japrosim is a java library for both discrete event and continuous simulation. GUI for modeling and automatic code generation are offered. An explanation module is integrated. Models are described in XML and owl for interoperability.
    Downloads: 0 This Week
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  • 21
    RatCalc
    It´s a simple but useful bit field calculator. It´s very useful to calculate operations between registers of processors or uControllers. OBS: The source code is also in the instalator.
    Downloads: 0 This Week
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  • 22
    minydro

    minydro

    A simple hydrodynamic code less than 700 lines long!

    A short and simple hydrodynamic Godunov code using a cell-based structure. This program is free to use. It was designed mainly for teaching purposes and it is made freely available in the hope that someone may find it useful.
    Downloads: 0 This Week
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  • 23
    Data Matrix

    Data Matrix

    Java Api to manipulate simple on data of Matrix Type

    Java Api to manipulate simple on data of Matrix Type. There is lot of usefull methods like resize, insert , remove, sort and lot of other methods. Usefull methods to manipulate with diagonals. For example you can create block diagonal matrix. There is lot of usefull methods to manipulate on mathematic matrix also, like determinant , norm , minor , cofactor , solveLienarSystem , arithmetic operations also and lot more.
    Downloads: 1 This Week
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  • 24
    This package contains code for use with Short Read DNA Sequencing technologies, and includes packages for ChIP-Seq, Whole Transcriptome Shotgun Sequencing, Whole Genome Shotgun Sequencing, SNP Detection, Transcript expression and file conversion.
    Downloads: 3 This Week
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  • 25
    Fast calculator

    Fast calculator

    Fast and simple calculator.

    Fast calculator is fast and simple calculator with many functions on java.
    Downloads: 0 This Week
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