Search Results for "data visualization, research"
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Showing 28 open source projects for "data visualization, research"
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Grafana
Leading open-source visualization and observability platform
Grafana OSS is the leading open-source platform for visualization and observability. It enables teams to query, visualize, alert on, and explore telemetry data from multiple sources in a single interface. With support for 100+ data source plugins—including Prometheus, Loki, Elasticsearch, InfluxDB, SQL/NoSQL databases, and OpenTelemetry—Grafana helps teams correlate metrics, logs, and traces across applications and infrastructure. -
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Systems Biology Markup Language (SBML)
A file format for exchanging computational models in systems biology
The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more. -
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sciNote
Open source electronic lab notebook (ELN) for scientists
sciNote is an open source electronic lab notebook (ELN) that helps you manage your laboratory work and stores all your experimental data in one place. sciNote is specifically designed for life science students, researchers, lab technicians and group leaders. -
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BioC
We describe a simple XML format to share text documents and annotation
A minimalist approach to share text documents and data annotations. Allows a large number of different annotations to be represented. Project files contain: - simple code to hold/read/write data and perform sample processing. - BioC-formatted corpora - BioC tools that work with BioC corpora BioC goals - simplicity - interoperability - broad use - reuse There should be little investment required to learn to use a format or a software module to process that format. We are... -
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CanReg5 (moved to Github)
Canreg5 is a software package for population based cancer registries
Cancer registries need a tool to input, store, check and analyse their data. If these data are also coded and verified in a standard way, it facilitates the production of comparable analyses across registry populations. The main goal of the CanReg5 project is to provide a flexible and easy to use tool to accomplish these objectives. CanReg5 is a multi user, multi platform, open source tool to input, store, check and analyse cancer registry data. It has modules to do: data entry,... -
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Atlas is a suite of variant analysis tools specializing in the separation of true SNPs and insertions and deletions (indels) from sequencing and mapping errors in Whole Exome Capture Sequecing (WECS) data.
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Tab2MAGE uses a flexible spreadsheet format for MIAME annotation of microarray experiments. Tab2MAGE spreadsheets may be submitted directly to ArrayExpress, or used to generate MAGE-ML for data exchange.
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rnasimulase
Simulation of allele-specific RNA-seq data
Simulation of allele-specific RNA-seq data -
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Gavrog stands for "Generation, Analysis and Visualization of Reticular Ornaments using Gavrog". It is a Java library together with a suite of interactive applications for the study of periodic net-like structures in space and their applications.
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The TIMTAM (Target Information Management Tracking And More) system implements a secure knowledgebase supporting the management, tracking, and analysis of experimental data associated with structural biology projects.
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TIDAL is a collection of data acquisition and processing tools for research in respiratory physiology. It provides a high-level language for specifying experimental protocols and required computations.
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Remote monitoring and controll system for home use. Main goal is to create multilayer software for collecting data (weather data, measured data), gain remote access via web page, and controll some aspects like heating and lighting. https://flattr.com
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An application built onto the Open Table Explorer engine for the acquisition and analysis of home energy consumption and solar energy production.Moved to github as Open Table Explorer
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rSIGNAL - ruby Simple Inter-Interface Generic Aggregation Layer. It allows external data sources to be aggregated, store the aggregated data and print the aggregated data out in a transformed format to a file (or integrated HTTP server) on demand.
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RubyMoss is a Web - Based Framework written with Ruby on Rails, intended to support all analysis and data processing for Mossbauer Spectroscopy. Written under BSD License.
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An STL format importer/exporter plugin script for Google SketchUp. Supports both binary and ASCII import and export.
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Advanced weather logger using METAR data written in Ruby, remotely controlled via TCP, create charts updated daily or manualy.
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A database schema and web application to archive, search, share, and download data of maximum body sizes of different taxonomic groups during the history of life on earth.
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LabDiary is a program for managing laboratory experiments in a sophisticated way. It is very easy to use - you can link experiments logically with each other, associate files to an experiment and structure all your data.
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FRIDA (flexible rapid interactive data analysis) is a generic program for manipulating, fitting, and plotting x,z,y data. It is primarily aimed at spectral analysis, especially in neutron scattering. Note: project has moved away from sf.net.
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weatherdb makes weather data accessible from geographers: it maintains real-time MySQL databases of meteorological data retrieved from the Web and Unidata LDM, and provides CGI for catalog and OGC Web Map Service.
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CompLearn is a general-purpose compression-based machine learning system that uses data compression to learn or data mine patterns in arbitrary data.
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Network Visualization is a mature part of computer science that is enjoying a good deal of growth, partially fueled by Bioinformatics. Network is a synonym for Graph, and both refer to a collection of nodes and edges.
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WxMonitor: An Open Source Weather Monitoring System This is a project to develop a Ruby based client and server system for the purpose of communicating with a Micro-Controller based weather monitoring system and display the data in real time.