Search Results for "https" - Page 8
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Showing 226 open source projects for "https"
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alignlib is a C++ library for computing and manipulating sequence alignments of protein sequences. Most of the functions and classes are exported to python thus permitting easy scripting of complex tasks. Alignlib has moved to github (https://github.com/AndreasHeger/alignlib)
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EASER
Ensembl Easy Sequence Retriever
Maldonado E, Khan I, Philip S, Vasconcelos V, Antunes A (2013) EASER: Ensembl Easy Sequence Retriever. Evolutionary Bioinformatics, 9:487-490. doi: https://doi.org/10.4137/EBO.S11335. -
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Please participate in the SURVEY on rgedit's future: https://www.surveymonkey.com/s/VNMMJMJ your answers are much appreciated! Gedit (Gnome editor, www.gedit.org) plug-in allowing it to become an easy-to-use and yet light-weight IDE for the statistical programming environment, R (www.r-project.org).
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GISBox by Citiviz
Ready-to-use appliance for GIS, Data Mining and Analysis, Modelling...
...The pre-configured and tested GISBox allows you to try and use in few minutes a variety of software used by data scientists, engineers, physicists, mathematicians, geomatics engineers, and geographers from around the globe, without installing anything more than once the Oracle VirtualBox™ software (https://www.virtualbox.org/) on your Linux, Windows or Mac computer. The GISBox is free and open, allowing it to be freely distributed, duplicated and passed around, even with your own datasets and in-house applications. If you read this and are related to the Ecole polytechnique de Lausanne - EPFL (http://www.epfl.ch) in Switzerland, please use this link for downloading or support information: http://gisbox.epfl.ch. ... -
Ship Agents FasterGemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
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This is the former home of pyecm, which has now been moved to github: https://github.com/martingkelly/pyecm Pyecm factors large integers (up to 50 digits) using the Elliptic Curve Method (ECM), a fast factoring algorithm.
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RESPOND-R
RESPOND-R Test Instrument
The RESPOND-R framework is a modular, distributed data logging framework built for the purpose of studying Emergency Informatics as it relates to human robot performance during disaster responses. Tutorials can be found on the wiki: https://sourceforge.net/p/respondr/wiki/ -
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A Python package with bindings to the "Virtual Instrument Software Architecture" VISA library, in order to control measurement devices and test equipment via GPIB, RS232, or USB. Note: Development of PyVisa moved to github https://github.com/hgrecco/pyvisa This page is of historical interest only!
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ParaSim
Parallelized calculation of molecular similarities
...It does not compute fingerprints by itself but relies on third party software to do so. Basically, all types of structural fingerprints which can be stored in an array of bits (a bitset) can be used by ParaSim. See the Wiki (https://sourceforge.net/p/parasim/wiki/Documentation/) for detailed documentation. FEEDBACK HIGHLY APPRECIATED! -
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Constrained Manipulation Planning Suite
openrave plugins for constrained manipulation
...It has been tested on all Ubuntu version from the last few years and will probably work with most modern linux distributions. Please see the wiki for installation and examples: https://sourceforge.net/p/comps/wiki/Home/ -
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PyMbs has moved to Bitbucket: https://bitbucket.org/pymbs/pymbs PyMbs is a Python library for modelling holonomic multibody systems. It is able to generate simulation code for Python, Modelica and Matlab.
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Vendettool
This allows to program a path for your vex robot in the simplest way !
...Il suffit de placer des point sur l'image, de définir une échelle et d'indiquer la distant qui sépare les roues motrices et le programme va générer un code RobotC que vous pourrez utiliser pour programmer votre robot ! Et il y a évidement pleins d'outils indispensables pour vous rendre la tâche plus facile ;). https://www.youtube.com/watch?feature=player_embedded&v=4U9jdZDquII -
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Mix
Mix is a tool to combine multiple assemblies from NGS data.
...These alignment edges are used for contig extension. The resulting output assembly corresponds to a path in the extension graph that maximizes the cumulative contig length. Please note that Mix has moved to: https://github.com/massyah/MIX -
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Moved to https://github.com/rdiankov/openrave An open-source, cross-platform, plugin-based robot planning environment for autonomous robotics. Includes services like collision detection, physics, (inverse) kinematics, sensors, robot controls, python bindings, and a network scripting environment.
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IMPORTANT: The project moved over to github! You can find it at: https://github.com/exhuma/python-cluster
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THIS PROJECT MIGRATED TO GITHUB https://github.com/cosmo-guffa/play-svg A great thanks to SF.net for hosting up until now... it's nothing personal, this just isn't the right tool for the job ;) Project description: pLAySVG is a python library for the development and manipulation of SVG vector graphics through scripting. pLAySVG makes it easy to create graphics based on geometric relationships.
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This project has been moved to https://bitbucket.org/pbazant/evoversum/src/master/ . Evoversum is a fast Darwinian evolution simulator. The program simulates a 2D world populated with "animals" which struggle for food, reproduce and may also eat each other. The subject of evolution is their behavior, which may become quite complex. There is an updated video tutorial at http://www.youtube.com/watch?
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ox_black_rhino
black_rhino is a multi-agent simulator for financial network analysis
This is the outdated code of black_rhino. The new version is maintained and hosted on github. Please see https://github.com/cogeorg/black_rhino -
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Topographica
Simulation software for brain modelling
...Topographica helps neuroscientists and computational scientists simulate and understand how topographic maps contribute to brain function. Topographica is now primarily maintained at github.com; see https://github.com/ioam/topographica for recent updates and releases. -
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GUI for DEDA
GUI for DEmography Data Analysis
<This project has been completely rewrote and transformed into a new one: https://sourceforge.net/projects/deday/. 2013/06/26> The graphic user interface for DEDA (DEmography Data Analysis), a scientific software package fitting survivalship data to a number of distributions using maximum likelihood (ML) method. Currently, Weibull (2p), Gompertz and Gompertz-Makeham are supported. IMPORTANT NOTICE: Only the GUI is provided here. -
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colonyzer image analysis software
Image analysis estimating cell density in arrayed microbial cultures
...Forms part of the Quantitative Fitness Analysis (QFA) workflow: http://research.ncl.ac.uk/qfa/ Suitable for high-throughput, genome-wide analysis of culture libraries when combined with the following qfa R package: http://qfa.r-forge.r-project.org/ This is the version presented, used and demonstrated in the following manuscripts: Lawless et al. 2010 http://dx.doi.org/10.1186/1471-2105-11-287 Addinall et al. 2011 http://dx.doi.org/10.1371/journal.pgen.1001362 Chang et al. 2011 http://dx.doi.org/10.1534/g3.111.000216 Banks et al. 2012 http://dx.doi.org/10.3791/4018 Development has been moved to github, where Colonyzer has undergone several recent improvements, particuarly making installation easier and analysis faster: https://github.com/CnrLwlss/Colonyzer -
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pylabrad development has moved to GitHub: https://github.com/labrad/pylabrad Packages are distributed through PyPI: https://pypi.python.org/pypi/pylabrad
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Function Calculator
Calculate some BASIC mathematical function
Calculate some BASIC mathematical function You can browse the source at: https://github.com/TheNiceGuy/FunctionCalculator -
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Pysimony
A Pythonic Implementation of Parsimony Inference of Phylogeny
UPDATE: After some bug fixes, I've ditched Pysimony for Javamony: https://sourceforge.net/projects/javamony/ Given Python's beauty, I know that someday I will have to finish Pysimony. A student's first attempt at a phylogenetic inference program, written in the simplistic yet elegant Python. Pysimony reads a FASTA file (only ATGC accepted) specified as its only argument. Basic testing has shown that it is slow, inaccurate and most definitely inefficient. -
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pyscope
Software oscilloscope using Python and tkinter
...Displays data by samples, time or frequency. Scales the input automatically or manually. It has been renamed "pdatascope" to avoid a name-clash with Pyscope, a scoping package on PyPi. See https://sourceforge.net/p/pydatascope/ for the latest code. -
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brocc
BLAST Read and OTU Consensus Classifier
NOW HOSTED ON GITHUB: https://github.com/kylebittinger/brocc Old releases are kept here for archival purposes.