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  • 1
    bioweb

    bioweb

    polyglot language framework to analyze genetic data

    polyglot framework using Python/C++/JavaScript to fast develop applications to analyze biological sequences
    Downloads: 0 This Week
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  • 2
    Pretty Damn Quick (PDQ) analytically solves queueing network models of computer and manufacturing systems, data networks, etc., written in conventional programming languages. Generic or customized reports of predicted performance measures are output.
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    Downloads: 2 This Week
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  • 3
    GPlates

    GPlates

    Interactive visualization of plate tectonics.

    GPlates is a plate-tectonics program. Manipulate reconstructions of geological and paleo-geographic features through geological time. Interactively visualize vector, raster and volume data. PyGPlates is the GPlates Python library. Get fine-grained access to GPlates functionality in your Python scripts.
    Downloads: 24 This Week
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  • 4
    ebfformat

    ebfformat

    An Efficient Binary data Format

    EBF, which stands for Efficient Binary Format, is a binary file format for reading and writing binary data easily. Reading writing routines are currently available in C,C++,Fortran,Java, Python, IDL, MATLAB. A program called ebftkpy which has a set of utility functions to work with the .ebf files , e.g., viewing the contents and getting a summary, is also provided. The EBF specification is designed to be concise and easy to understand to make it easier for others to write their own code if needed. ...
    Downloads: 0 This Week
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    Build Securely on AWS with Proven Frameworks

    Lay a foundation for success with Tested Reference Architectures developed by Fortinet’s experts. Learn more in this white paper.

    Moving to the cloud brings new challenges. How can you manage a larger attack surface while ensuring great network performance? Turn to Fortinet’s Tested Reference Architectures, blueprints for designing and securing cloud environments built by cybersecurity experts. Learn more and explore use cases in this white paper.
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  • 5
    iHome by ionware

    iHome by ionware

    iHome Smart Home System Platform

    ...See wiki instructions to burn the SD Card image file, insert into your RPi Zero and Plug and Play. The iHome is an Internet of Things (IOT) demo project for the ionware ionC1 hardware and the software system and is a complete SCADA platform c/w Modbus TCP Servers and Modbus RS485 serial clients for scalable building automation projects. See - ionware.io/free-offer/
    Downloads: 0 This Week
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  • 6
    The Player Project: Player is a networked interface to robots and sensors. Stage and Gazebo are Player-friendly multiple-robot simulators. The software aims for POSIX compliance and runs on most UNIX-like OS's. Some parts also work on Windows.
    Downloads: 8 This Week
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  • 7
    LINARP - Linarp Is Not A Rietveld Program; Software for the analysis of crystallographic data
    Downloads: 0 This Week
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  • 8

    Microarray assosiated motif analyzer

    Cis-element prediction tool from microarray data

    We developed a novel clustering-free method, microarray-associated motif analyzer (MAMA), to predict novel cis-acting elements based on weighted sequence similarities and gene expression profiles in microarray analyses. Simulation of gene expression was performed using a support vector machine and based on the presence of predicted motifs and motif pairs. The accuracy of simulated gene expression was used to evaluate the quality of prediction and to optimize the parameters used in this...
    Downloads: 0 This Week
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  • 9
    C++QED

    C++QED

    A framework for simulating open quantum dynamics

    C++QEDv2 specifies a small grammar to describe composite quantum systems. Apart from providing a number of elements out of the box, there are tools which facilitate the implementation of new elements. These are being added continuously, as the need arises. The principal concept of the design of C++QEDv2 is that all information available at compile time should be processed as such, with the help of TMP.
    Downloads: 1 This Week
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    MongoDB Atlas runs apps anywhere

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  • 10
    Crystalsim -  XRD hkl simulation

    Crystalsim - XRD hkl simulation

    X-ray diffraction (XRD) analysis for hkl simulation of any crystal.

    ...Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta, gamma can also be entered manually. Processed data can be saved as .csv file format. Designed by M Kanagasabapathy, Associate Professor, Department of Chemistry, Rajus' College, Affiliated to Madurai Kamaraj University Rajapalayam (TN) India email: rrcmks(at)gmail.com
    Downloads: 0 This Week
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  • 11
    APBS

    APBS

    Biomolecular electrostatics software

    This software has moved to http://www.poissonboltzmann.org/.
    Downloads: 0 This Week
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  • 12
    An Open Source IEC 61131-3 Integrated Development Environment, providing PLCOpen SoftPLC programming, CanOpen IO's, and SVG based HMI.
    Downloads: 0 This Week
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  • 13
    QtiPlot
    QtiPlot is a user-friendly, platform independent data analysis and visualization application similar to the non-free Windows program Origin.
    Downloads: 21 This Week
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  • 14
    OpenMultiphysics

    OpenMultiphysics

    Application Integration for HPC Multiphysics

    The OpenMultiphysics project is the home for community-driven development of application integration technologies designed to aid in the design and implementation of multiphysics simulation capabilities. Design and development in this project is driven by the Consortium for Open Multiphysics. Feel free to visit us at our GitHub site as well: https://github.com/IllinoisRocstar/IMPACT
    Downloads: 0 This Week
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  • 15

    epidaurus

    tumor epigenetic database

    Epidaurus is a collection of epigenetic datasets including transcription factor ChIP-seq, histone ChIP-seq, DNase-seq, FAIRE-seq, DNA methylation, etc. It also includes commonly used genome features (GC content, conservation) and RNA-seq. A user friendly interface has been developed to interrogate and visuzlize these datasets.
    Downloads: 2 This Week
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  • 16
    QMForge reads output from various quantum mechanical calculations and provides tools for analyzing these results. Specifically, population (Mulliken and C-squared), fragment, and charge decomposition analyses are available. See https://qmforge.net for more info.
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    Downloads: 1 This Week
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  • 17
    powerfactory-fmu

    powerfactory-fmu

    The FMI++ PowerFactory FMU Export Utility

    This project has been moved to: https://github.com/fmipp/powerfactory-fmu The FMI++ PowerFactory FMU Export Utility is a stand-alone tool for exporting FMUs for Co-Simulation (FMI Version 1.0 & 2.0) from DIgSILENT PowerFactory models. It is open-source (BSD-like license) and freely available. It is based on code from the FMI++ library and the Boost C++ libraries. The FMI++ PowerFactory FMU Export Utility provides a graphical user interface (new in version v1.0) and - alternatively - Python scripts that generate FMUs from certain PowerFactory models. Additional files (e.g., time series files) and start values for exported variables can be specified. Currently, two types of simulations are supported: In quasi-static steady-state simulations a power system’s evolution with respect to time is captured by a series of load flow snapshots. ...
    Downloads: 2 This Week
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  • 18
    RoboSchool

    RoboSchool

    Open source software for robot simulation, integrated with OpenAI Gym

    Roboschool is a set of open source robot simulation environments for reinforcement learning, created as an alternative to the Mujoco physics engine. It integrates with OpenAI Gym and provides a variety of continuous control tasks, including humanoid locomotion, quadrupeds, and robotic arms. The library is built on the Bullet Physics engine, making it accessible without the licensing requirements of Mujoco. Roboschool includes training scripts and examples for applying reinforcement learning...
    Downloads: 1 This Week
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  • 19
    An open source framework for LC-MS based proteomics and metabolomics. OpenMS offers data structures and algorithms for the processing of mass spectrometry data. The library is written in C++. Our source code and wiki lives on GitHub (https://github.com/OpenMS/OpenMS).
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    Downloads: 217 This Week
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  • 20
    Finite Element Method Magnetics

    Finite Element Method Magnetics

    Finite element analysis of electromagnetic devices

    Solves low frequency magnetic, electrostatic, heat flow, and current flow problems on 2D and axisymmetric domains via the finite element method.
    Downloads: 116 This Week
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  • 21
    Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
    Downloads: 0 This Week
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  • 22
    CasADi
    A symbolic framework for C++, Python and Octave implementing automatic differentiation by source code transformation in forward and reverse modes on sparse matrix-valued computational graphs.
    Downloads: 18 This Week
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  • 23

    Molecular Dynamics Studio

    Molecular Dynamics Cell Construction

    This is a collection of software modifications created to integrate NanoEngineer-1, PACKMOL and MSI2LMP for the purpose of easily creating molecular dynamics cells. NanoEngineer-1 is a molecular CAD software written by Nanorex and provides the user an easy way to create molecules, while the software modifications allow the user to type atoms using multiple force fields. PACKMOL can generate a random collection of molecules using the molecule templates from NanoEngineer-1 thus providing the...
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    Downloads: 31 This Week
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  • 24

    slurm-roll

    Slurm Resource Manager for Rocks Clusters

    Slurm is a replacement for other resource management software and schedulers like gridengine or torque. The slurm roll integrates very well into a rocks clusters installation. In the folder addons, there are a lot of useful rolls for rocks clusters 6.1 and 6.2. These rolls do not depend on slurm. Please see Discussion for further information and support
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    Downloads: 59 This Week
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  • 25

    Safe Harbor Deidentification

    Safe Harbor Deidentification for medical documents

    Phalanx - Deidentify Safe Harbor Deidentification Mode of Phalanx is an abridged pipeline of NLP annotators culminating in NER annotators which write output of text offsets. It uses the Safe Harbor deidentification method.
    Downloads: 0 This Week
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