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Combines Blender's graphical interface and rendering capabilities with MBDyn's multi-body dynamics, aerodynamics, and aeroelastics simulation and analysis, for rapid modeling and realistic rendering of physics based multi-body simulations.
Liegkat-Archiv delivers ALK converters for spatial data formats (EDBS, BGRUND, SQD, DFK, HK) and coordinate systems used in German cadastral agencies before ALKIS into KML and JML. It delivers Python packages and XSL files.
A database and a web front end for physiologic data on animal feeding, developed with PostgreSQL and Django at NESCent (http://www.nescent.org) for Mammalian Feeding Working Group (http://www.feedexp.org).
Current development of the codebase is on Github at http://github.com/NESCent/feedingdb.
"""
E-Cell's source code repository has moved to GitHub!
https://github.com/ecell
The development of E-Cell now continues on GitHub.
The Subversion repository was abandoned.
"""
E-Cell System is an object-oriented software suite for modeling, simulation, and analysis of large scale complex systems such as biological cells. It allows many components driven by multiple algorithms with different timescales to coexist in a model.
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BESTGUI is a GUI front-end for BEST written in Python and GTK+. BEST (Basic Envisat SAR Toolbox) is an ESA (European Space Agency) software tool designed to facilitate the use of ESA SAR data.
This program minimizes boolean expressions. After combining minterms as far as possible, the program draws a chart of prime implicants which the user can easily read and manipulate to remove any remaining superfluous implicants.
Metmask has moved to github http://github.com/hredestig/metmask
Metmask is a tool written in python for managing chemical identifiers for metabolomics experiments. It can incorporate identifiers from local textfiles, several online databases, query PubChem and record all found associations in a local sqlite database.
This is a set of Python classes that can be used to simulate dynamic multi-body systems. It used to be a project for studies. Now it is not being worked on anymore, but it is completely GPLized.
The Virtual Commons (http://commons.asu.edu) is an open software initiative devoted to computational experiments on collective action and resource governance and funded by Arizona State University's Center for Behavior, Institutions, and the Environment (http://cbie.asu.edu).
NOTE: we've moved our development to GitHub at https://github.com/virtualcommons - please look for the latest versions there.
RADAR stands for Rapid Automatic Detection and Alignment of Repeats in protein sequences. RADAR identifies gapped approximate repeats and complex repeat architectures involving many different types of repeats.
Radar has moved to github (https://github.com/AndreasHeger/radar)
The EU Provenance project developed an architecture to document a data generating process in a distributed environment. The Python Client Side Library (CSL) enables the development of provenance-aware Python applications.
This application provides a web based visual browser for NetCDF files. The application provides a simple and friendly user interface for getting a quick overview of the data contained in the files.
Moved to GitHub in 2013. This SourceForge project is no longer updated.
Source code and documentation:
stokes: https://github.com/kichiki/stokes
libstokes: https://github.com/kichiki/libstokes
libiter: https://github.com/kichiki/libiter
twobody: https://github.com/kichiki/twobody
RYUON User's Manual: https://github.com/kichiki/RYUON-manual
RYUON : many-particle simulation suite
pyPulsar is a program for simulation and fitting of solid-state NMR spectra. It provides scripting facilities using Python.
(This project was not developed for a long time: It will be soon moved in a new project currently developed)
prefix is a command line prefix calculator written in python. It supports basic math functions (add, subtract, multiply, divide) as well as some more advanced (exponents, logarithms, etc.)
Robotic Manipulator Development and Simulation Environment in Python and Blender. IMPORTANT: Development moved to github. http://github.com/ajnsit/r2d3
As of 2012, the source code is hosted in GitHub https://github.com/tessonec/PySPG
PySPG is both, a set of python modules and a program that allows the user to run a program systematically changing the parameters that them receive.
Originally conceived to generate parameters for running simulations in computational physics.