Showing 685 open source projects for "alpha"

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    MongoDB Atlas runs apps anywhere

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  • 1
    PyQuante (Python Quantum Chemistry) is an open-source package for quantum chemistry programming written in Python, Numerical Python, and C.
    Downloads: 1 This Week
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  • 2

    P3BSseq

    Parallel processing pipeline for analysis of bisulfite sequencing data

    Bisulfite sequencing (BSseq) processing is among the most cumbersome next generation sequencing (NGS) applications. Though some BSseq processing tools are available, they are scattered, require puzzling parameters and are running-time and memory-usage demanding. We have developed P3BSseq, a parallel processing pipeline for fast, accurate and automatic analysis of BSseq reads that trims, aligns, annotates, records the intermediate results, performs bisulfite conversion quality assessment,...
    Downloads: 0 This Week
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  • 3
    Libre Mechanics

    Libre Mechanics

    Open Knowledge on engineering development.

    Libre Mechanics it’s an Open Knowledge project created to offer a useful platform of information related with the development and research of Mechanical Engineering themes and similar fields, higly related with the use of Open Source and Software Libre tools. Here you will find a wide variety of projects, publications and scientific material available as references for developing their own projects, also guides and tutorials that allow you to take advantage of free software tools available...
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    Downloads: 4 This Week
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  • 4
    converts a SAM file to fasta file. SAM file is a file output from bwa alignment software. It outputs aligned fasta file.
    Downloads: 0 This Week
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  • 5

    MerDAQ

    A DAQ solution in Python 2 for your Ardruino

    MerDAQ is a data acquisition GUI and other tools for collecting and storing time dependent. Originally designed to collect 4 temperature data vs. time and plot one of the temperatures in real time with matplotlib. Ideal for use with Arduino.
    Downloads: 0 This Week
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  • 6
    YoMo

    YoMo

    You Only Meter Once - The open hardware smart metering system

    Researches have shown that immediate feedback can increase energy saving dramatically. YoMo aims to empower people using low-cost open hardware smart meters in their household. The metering system consists of a coordination unit, a raspberry pi, and several smart meters, arduino boards equipped with communication shields and our self-designed yomo metering shield. The smart meters are attached to household devices and monitor their energy consumption. The gathered data is timestamped and...
    Downloads: 0 This Week
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  • 7
    pyxaid

    pyxaid

    PYthon eXtension for Ab Initio Dynamics

    Downloads: 0 This Week
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  • 8

    GMES

    GMES is a free Python package for FDTD electromagnetic simulations.

    GMES is a free finite-difference time-domain (FDTD) simulation Python package developed at GIST to model photonic devices. Its features include simulation in 1D, 2D, and 3D Cartesian coordinates, distributed memory parallelism on any system supporting the MPI standard, portable to any Unix-like system, variuos dispersive ε(ω) models, CPML absorbing boundaries and/or Bloch-periodic boundary conditions, and arbitrary material and source distributions. GMES officially stands for GIST...
    Downloads: 0 This Week
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  • 9
    FAST Simulations

    FAST Simulations

    An Open source Analysis and SImulation Toolbox for Fuel Cells

    FAST is an Analysis and Simulation Toolbox (FAST) for Fuel Cells (FC) FAST-FC is the doctorate work of David B. Harvey and was developed with support from the U.S. DOE, Ballard, and Queen's University. Derivative works of FAST-FC include FC-APOLLO which is a forked branch of this project intended to capture the code state at the exit of the funded DOE project. FAST-FC is the open and active community branch. FAST-FC is developed and maintained by the original creator and...
    Downloads: 0 This Week
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  • 10
    Buildes

    Buildes

    A designer’s program for describing parts of the building

    Buildes is an integrated development environment that assists the user in creating building information. It reads a text (session) file from which it compiles the information. It then allows the user to browse, analyze and export the resulting building knowledge. The compilation system is written in pure Python. The building components created are rendered in PythonOCC. The GUI is written using PyQt.
    Downloads: 0 This Week
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  • 11

    f90lafg

    Diffraction related calculations in Fortran 2003

    full snapshots of CRYSFML code and parts of SXTALSOFT code
    Downloads: 0 This Week
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  • 12

    Pyclamp

    A Python package used to extract and analyse electrophysiological data

    Pyclamp is Python package used to extract and analyse electrophysiological data. A graphical user interface has been developed to allow a user to run the pack- age without requiring any knowledge of Python code. Presently, Pyclamp is designed to perform very specific forms of analysis on evoked synaptic responses: Data analysis (under development) : This is a highly user-interactive en-vironment that can be used to discriminate synaptic events, obtain various measures of their kinetics...
    Downloads: 0 This Week
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  • 13
    finFoil is an application to help amateur surfboard fin makers foil their fins properly. All downloads are moved to https://finfoil.io Check out the homepage for the latest news and tutorials: https://finfoil.io hrobeers
    Downloads: 0 This Week
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  • 14
    Copy Number Analysis for Targeted Resequencing (CONTRA) is a tool for copy number variation (CNV) detection for targeted resequencing data such as those from whole-exome capture data.
    Downloads: 0 This Week
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  • 15

    Brainstorm Network

    Software to organize a brainstorm as a complex network.

    This project aims to organize a brainstorm or a bibliographic revision in a network (graph). With this organization the users are able to visualize the main points of the brainstorm (the hubs in the network). Moreover, they can access the information through the rede, interactively, clicking on the edges or nodes! All information is associated with a reference list (imported from a bibtex file). This project uses Python, Web2py, MariaDB and VIS.js (D3.js).
    Downloads: 0 This Week
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  • 16
    Theodore is a tool for semi-automated hybrid assembly of genomes, improving assembly quality by combining multiple information sources.
    Downloads: 0 This Week
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  • 17
    ChannelFinder Directory Service
    Generic directory service (for the EPICS tool set). Directory entries are channels with properties and tags. Applications can query a web service to retrieve channels based on wildcard matching on properties and tags, and manipulate the directory data. Code has been moved to GitHub at https://github.com/ChannelFinder
    Downloads: 0 This Week
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  • 18
    **we moved to github** https://github.com/gimli-org/gimli Geophysical Inversion and Modeling Library
    Downloads: 0 This Week
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  • 19

    SAT-Assembler

    Scalable and accurate targeted gene assembly for large-scale NGS data

    SAT-Assembler is a scalable and accurate gene assembly tool for large-scale RNA-Seq and metagenomic data. It recovers genes from gene families of particular interest to biologists with high coverage, low chimera rate, and extremely low memory usage compared with exiting gene assembly tools. Moreover, it is naturally compatible with parallel computing platforms.
    Downloads: 0 This Week
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  • 20
    Square Genome Annotator
    Squere is a prokaryote genome annotation user-friendly software, with easy installer and graphical interface.
    Downloads: 0 This Week
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  • 21
    Python Control Systems Library

    Python Control Systems Library

    Feedback control system analysis and design

    The Python Control Systems Library, python-control, is a python module that implements basic operations for analysis and design of feedback control systems. This homepage for this project is at http://python-control.org and the code base in maintained at https://github.com/python-control/python-control. Information on this page is out of date, but left here for posterity.
    Downloads: 1 This Week
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  • 22

    Mathpad

    A Python based command line math utility.

    Mathpad is a command line utility. It will later have a GUI, but not at this time.
    Downloads: 3 This Week
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  • 23
    Graphical tool for managing database of geocaches and waypoints, importing GPX files and exporting geocaches to many formats including GPX, POI, HTML and others.
    Downloads: 0 This Week
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  • 24

    ipcvis

    Visualize Inter Process Communication

    Small python script that can visualize Inter Process Communication on Linux. It can create a graph of TCP and Unix sockets, pipes and also process hierarchy. Short (59 sec) demo visualizing ssh client connecting to ssh server on the same Ubuntu host: http://youtu.be/8XFKwzkexQY Longer (2 min 13 sec) demo visualizing ZoneMinder surveillance solution operation (stopping, starting, enabling and viewing camera): http://youtu.be/kM7klE61Ibk Tested on Ubuntu 14.10 and Debian...
    Downloads: 0 This Week
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  • 25
    Support for Ted's angels
    Downloads: 0 This Week
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