Search Results for "gnu/linux" - Page 12
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Showing 2272 open source projects for "gnu/linux"
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pyntcloud
pyntcloud is a Python library for working with 3D point clouds
This page will introduce the general concept of point clouds and illustrate the capabilities of pyntcloud as a point cloud processing tool. Point clouds are one of the most relevant entities for representing three dimensional data these days, along with polygonal meshes (which are just a special case of point clouds with connectivity graph attached). In its simplest form, a point cloud is a set of points in a cartesian coordinate system. Accurate 3D point clouds can nowadays be (easily and... -
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TheoDORE
Theoretical Density, Orbital Relaxation and Exciton analysis
The TheoDORE (Theoretical Density, Orbital Relaxation and Exciton analysis) package is a general purpose program suite for the analysis of excited states obtained from quantum chemical excited state calculations. Wavefunction analysis is based on state and transition density matrices, which provides a unified formalism applicable independent of the wavefunction model. TheoDORE is interfaced to a number of quantum chemical programs (Q-Chem, Columbus, Turbomole, ...) and can be used for... -
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osm4scala
Reading OpenStreetMap Pbf files.
Scala and polyglot Spark library (Scala, PySpark, SparkSQL, ... ) focused on reading OpenStreetMap Pbf files. -
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Sardana
A python based control system
Sardana is the control program initially developed at ALBA. Our mission statement: Produce a modular, high performance, robust, and generic user environment for control applications in large and small installations. Make Sardana the generic user environment distributed in the Tango project and the standard basis of collaborations in control. The origin of the Sardana name comes from a Catalan dance to honor the region where the ALBA synchrotron is build. Sardana is entirely built over... -
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QuickPlot
Simple user interface for gnuplot aimed for reflectometry data
Graphical user interface for gnuplot to create publication quality figure very quickly. It supports templates for fast formatting of graphics, different plot styles, insets, axis and label options. One important feature is storing metadata in png and pdf files that can be used to reload any graph saved with QuickPlot. -
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miRPV
miRPV: An automated pipeline for miRNA Prediction and Validation in si
miRPV is an Automated tool that allows users to predict and validate microRNA from genome/gene sequence. System Requirement CPU: AMD64 (64bit) Memory: 2Gb RAM Storage: 5Gb Ubuntu 18.04 -
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GLogic
A logic gate simulator for linux developed with Gtk and python.
GLogic is a logic gate simulator for linux and an adaptation of the gLogic package.... -
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XRD CUBIC
Simulate crystal cell length (a), Miller indices {h, k, l}, d-spacing
This is a basic computer program (coded in Python) to simulate possible unit crystal cell length (a), Miller indices - {h, k, l} and interplanar spacing (d) for cubic crystals from observed (experimental) X-ray diffraction (XRD) angle, 2-theta. It can simulate all these possible crystal lattice parameters for cubic crystal systems between the given 2–theta values within the range of specified cell length (a) limits. 1. Enter wavelength of X-ray (in Angstroms) 2. Enter minimum and... -
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remove the temporary files using Temp manager, and automate the operation (remove the files every 5 seconds). Built with python. Interface : Tkinter.
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SciDAVis is a user-friendly data analysis and visualization program primarily aimed at high-quality plotting of scientific data. It strives to combine an intuitive, easy-to-use graphical user interface with powerful features such as Python scriptability.
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GDAL wheels for linux
GDAL wheels for python and C/C++ projects (Linux only)
To use precompiled wheels: 1) go to releases (Files) and download tarball needed; 2) install it with command: python3 -m pip install /path/to/wheel.whl Or simply use URL in pip: python3 -m pip install https://sourceforge.net/projects/gdal-wheels-for-linux/files/GDAL-3.1.4-cp37-cp37m-manylinux_2_5_x86_64.manylinux1_x86_64.whl/download URL may be found under "View details" button (i) To use GDAL in C/C++ project you need to link gdal lib AND all libs located at dir GDAL.libs (usually this folder resides inside python site-packages) To compile your own wheels see information given at forefather project: https://github.com/youngpm/gdalmanylinux Usually this is done via command `make wheels` GDAL wheels for Windows are provided by Christoph Gohlke at https://www.lfd.uci.edu/~gohlke/pythonlibs/#gdal Built with PROJ (proj.db is included), GEOS, EXPAT. ... -
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sidmon3
Sudden ionospheric distubance (SID) monitor
sidmon is a python program for receiving and recording submarine-transmitter signal intensities and directions in the VLF frequency range using a computer sound card. The intensities of these signals reflect the ability of radio waves at those wavelengths to propagate in what is essentially a waveguide formed by the earth and the ionosphere above it. Fluctuations in those signal intensities and directions often reflect daytime perturbations of the ionosphere by solar processes, such as... -
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Truss-101
A desktop application written in Python to solve 2D truss structures.
A desktop application to solve statically determinate and indeterminate 2D truss structures using Matrix Displacement Method (aka Finite Element Method). -
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Pysces
PySCeS is the Python Simulator of Cellular Systems
PySCeS is the Python Simulator of Cellular Systems. For a network of coupled reactions it does a stoichiometric matrix analysis, calculates the time course and steady state, and does a complete control analysis. -
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SBW (Systems Biology Workbench)
Framework for Systems Biology
The Systems Biology Workbench(SBW) is a framework for application intercommunications. It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python, and runs under Linux,OSX & Win32. It comes with a large number of modules, encompassing the whole modeling cycle: creating computational models, simulating and analyzing them, visualizing the information, in order to improve the models. All using community standards, such as SED-ML, SBML and MIRIAM. -
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MiModD
Mutation Identification in Model Organism Genomes using Desktop PCs
MiModD is a software package for genomic variant identification from next-generation sequencing (NGS) data with optimized usage of system resources and a user-friendly interface. For most model organism genomes it lets the user carry out a complete analysis from unaligned genomic NGS read data to an annotated list of variants on a regular Desktop PC within a few hours. Its user-interface is beginner-friendly and designed to encourage geneticists to analyze NGS data themselves without the... -
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XISMuS
X-Ray Imaging Software for Multiple Samples
ATTENTION: Cumulative update 2.5.0 has been released!! The update works for any previous 2.x.x version. If upgrading from version v1.x.x, please download and install v2.0.0 first. IMPORTANT FIXES in respect to base v2.0.0 version: v.2.5.0 introduces the Differential Attenuation and Cube Viewer utilities, and migrates user database to *.json files v2.4.3 fixes a with K element in the fit-approx method v2.4.3 fixes and issue where saving plots with fit-approx or a auto-wizard could... -
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A library of tools for doing computation in game theory.
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MuJoCo-py
mujoco-py allows using MuJoCo from Python 3
...It allows developers and researchers to run detailed rigid body simulations with contacts directly from Python, making MuJoCo easier to integrate into machine learning workflows. The library is compatible with MuJoCo version 2.1 and supports Linux and macOS, while Windows support has been deprecated. It provides utilities for loading models, running simulations, and accessing simulation states in real time, along with visualization tools for rendering environments. The project also includes interactive examples showcasing collision handling, texture randomization, state resetting, and robot control. ... -
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pyModSlave
Modbus TCP/RTU Slave Software.
pyModSlave is a free python-based implementation of a ModBus slave application for simulation purposes. You can install the python module or use the precompiled (for Windows only) stand alone GUI (Qt based) utility (unzip and run). pyModSlave also includes a bus monitor for examining all traffic on the bus. You can also download it from pypi <https://pypi.org/project/pyModSlave/>. pyModSlave is based on modbus-tk <http://code.google.com/p/modbus-tk/>, pySerial... -
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StreamAlert
StreamAlert is a serverless, realtime data analysis framework
StreamAlert is a serverless, real-time data analysis framework that empowers you to ingest, analyze, and alert on data from any environment, using data sources and alerting logic you define. Computer security teams use StreamAlert to scan terabytes of log data every day for incident detection and response. Incoming log data will be classified and processed by the rules engine. Alerts are then sent to one or more outputs. Rules are written in Python; they can utilize any Python libraries or... -
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FreeCAD-PCB
Import your PCB boards to FreeCAD
[ENG] Mod FreeCAD-PCB allow you to import PCB boards to FreeCAD. Scope of mod: - support for many different layers, - possible to choose colours, transparency and names for each layer, - mod allows you to import IGES models with colours, - possible to show holes/vias independent. [PL] Moduł FreeCAD-PCB pozwala na importowanie płytek PCB do programu FreeCAD. Możliwości modułu: - wsparcie dla wielu różnych warstw, - wyświetlanie otworów, przelotek niezależnie od siebie, -... -
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MITRE Annotation Toolkit
A toolkit for managing and manipulating text annotations
The MITRE Annotation Toolkit (MAT) is a suite of tools which can be used for automated and human tagging of annotations. Annotation is a process, used mostly by researchers in natural language processing, of enhancing documents with information about the various phrase types the documents contain. MAT supports both UI interaction and command-line interaction, and provides various levels of control over the overall annotation process. It can be customized for specific tasks (e.g.,... -
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MAGeCK
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. We thank the support... -
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PythonStarSplitter
A Python Script I made to split a starfield image into several layers.
A Python Script I made to split a starfield image into several layers. To be able to use the script, PixInsight with an installed Gaia data catalogue is required, as it needs the exported astrometry data text file.
