Showing 145 open source projects for "atom-project"

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  • 1
    Th3inspector

    Th3inspector

    Best Tool For Information Gathering

    ...It exposes a single command-line entrypoint (Th3inspector.pl) with many switches for common reconnaissance tasks — examples include website info, whois, MX lookup, geo-IP, subdomain discovery, CMS detection, port scanning, and Cloudflare real-IP resolution — so a user can chain many checks from one script. The project provides simple install wrappers for Linux, Android/Termux and even instructions for Windows (Perl + CPAN modules), and includes helper scripts to update or install dependencies automatically. The repository is actively packaged as versioned releases in the README (current noted version 1.9) and is distributed under an MIT license.
    Downloads: 1 This Week
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  • 2

    SDT-weather-com

    LMS SuperDateTime Weather.com Plugin

    ...Repository URL: http://sourceforge.net/projects/sdt-weather-com/files/repo.xml or http://downloads.sourceforge.net/project/sdt-weather-com/repo.xml
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    Downloads: 3,965 This Week
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  • 3
    Free DELTA

    Free DELTA

    Software tools for processing taxonomic descriptions in DELTA format

    The Free DELTA Project is a free, open-source, software alternative for a generic system to the processing of taxonomic descriptions based on the DELTA (DEscription Language for TAxonomy) format.
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    Downloads: 163 This Week
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  • 4
    The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.
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    Downloads: 24 This Week
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  • 5
    An innovative Open Source CEP (Complex Event Processing) engine. It implements the event stream processing as a library embeddable in C++ and Perl. You can think of the Complex Event Processing engine as an in-memory database driven by triggers, or a data-flow machine, or a spreadsheet on steroids (and without the GUI part).
    Downloads: 0 This Week
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  • 6
    Bridge Designer and Contest

    Bridge Designer and Contest

    A national virtual bridge engineering contest for kids of all ages.

    ...Based on the award-wining Bridge Designer client software, now open source through this project. Web site infrastructure supports worldwide participation in qualifying and semifinal rounds with a tiny administrative staff.
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    Downloads: 2 This Week
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  • 7

    idcp

    Control program for Undulators at the BESSYII Synchrotron

    The BESSY II synchrotron is operated at the Helmholtz-Zentrum Berlin. Undulators are moveable magnetic structures that force the electron beam on a curved trajectory creating synchrotron radiation. This project is the undulator control software.
    Downloads: 0 This Week
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  • 8

    mers

    Portable software and data related to Mersenne numbers

    ...Useful to automate certain tasks related to GIMPS (www.mersenne.org) for computers that cannot run the GIMPS software for whatever reason. Much of the code has been in use since 1990 or so by a few people. The project web site at https://mers.sourceforge.io/mersenne.html has data about Mersenne numbers from many people generated by this and other software, notably from the GIMPS project.
    Downloads: 2 This Week
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  • 9
    Systems Biology Markup Language (SBML)

    Systems Biology Markup Language (SBML)

    A file format for exchanging computational models in systems biology

    The Systems Biology Markup Language (SBML) is an XML-based description language for representing computational models in systems biology. Visit the project web site to learn more.
    Downloads: 31 This Week
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  • 10

    EvidentialGene

    Evidence Directed Gene Construction for Eukaryotes

    ...Over-produced constructions are classified by gene evidence for best qualities per "locus", including genome-aligned and gene-transcript aligned (genome-free) locus identification. All software developed for EvidentialGene is publicly available. See project wiki/blog for notes.
    Downloads: 7 This Week
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  • 11
    MANTI

    MANTI

    MANTI - Mastering Advanced N-Termini Interpretation

    MANTI is a one-stop shop N-termini annotation & evaluation solution. MANTI was previously (un)known as muda.pl ahead of v3.7, the project was renamed to MANTI.pl with v3.7 on 2019-06-24. It congregates information from different MaxQuant or DiaNN/MSFragger output files into a master file suitable explicitly for protein neo-termini analyses. The central anchor for the data congregation is the modificationSpecificPeptides.txt or diann-output.pr_matrix.tsv file - additional data is inferred from different other source files from the corresponding folder. ...
    Downloads: 0 This Week
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  • 12
    The Simplest Manual Counter

    The Simplest Manual Counter

    Manual counter with the keyboard or the mouse on images

    ...After associating a key to each item, or a predefined graphical symbol for images, pressing the key or clicking on the image increments its associated counter, and displays (for the images) the symbol at the mouse's pointer location. Such a project is so simple a child could use it!
    Downloads: 2 This Week
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  • 13
    The goal of this project is to investigate optimal ways to do genre classification for the ten indigenous South African languages. Funded by Dept of Arts and Culture of the SA Government. http://www.trifonius.co.za/projects/genre-classification
    Downloads: 0 This Week
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  • 14

    misc genomics tools

    Various scripts used in sequencing, annotation and RNAseq analysis

    This is a collection of various programs developed in the course of a genomics project, involving the Pseudomonas strain NCIMB10586 These include * identifying and correcting errors in an (eg) pacbio genome sequence using illumina reads * prokaryotic sequence/genome annotation * RNAseq analysis - normalisation and collation of multiple samples as a group * RNAseq visualisation All scripts are provided on a 'best efforts' basis, however due to various system changes I do not guarantee that all files are the version used in the analysis. ...
    Downloads: 0 This Week
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  • 15

    TA-Lib.git: Technical Analysis Library

    Mirror of the TA-Lib project using a Git repository

    This project is intended to provide Git access to the code of the original project, TA-Lib, which uses Subversion. It is intended for system integrators wishing to use TA-Lib in their Git-managed project through Git submodules or subtrees. No actual development is being done here; all development happens in the original project.
    Downloads: 0 This Week
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  • 16

    mapska

    The Murder Accountability Project's Serial Killer Algorithm

    ...Download SHR76_19.csv (23/03/2021) - https://www.dropbox.com/s/ye37woe6et05qgs/SHR76_19.csv.zip?dl=1 For information on this algorithm and the Murder Accountability Project please visit: www.murderdata.org. Algorithm: Copyright (c) 2010, 2016 and 2017 - Murder Accountability Project. License: GNU General Public License (GPL) version 3.
    Downloads: 1 This Week
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  • 17
    MANTI.pl / muda.pl

    MANTI.pl / muda.pl

    muda.pl - MQ unified data assembler

    -------- ATTENTION START: RENAMING muda.pl was renamed to MANTI.pl with v3.7, project development can be tracked on the MANTI project page on sourceforge.net. Old versions remain here for archival purposes. -------- ATTENTION END muda.pl is an evaluation script (written in Perl) without great dependencies. It congregates information from 4 different MaxQuant output files into a master file suitable explicitly for protein neo-termini analyses.
    Downloads: 0 This Week
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  • 18
    OpenATPOL

    OpenATPOL

    A reference implementation of the Polish geobotanical grid

    This project is a reference, open source implementation of the coordinate conversion algorithms for the Polish geobotanical grid called ATPOL.
    Downloads: 0 This Week
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  • 19
    The Elvira project is a suite of tools to perform high-throughput genomic assemblies of repetitive, structured samples such as viruses or targeted regions of larger genomes.
    Downloads: 0 This Week
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  • 20
    This project contains the software for extracting bioinformatics data (sequences, features and annotations) from TIGR's legacy schemas as well as support for efficiently loading data into chado from BSML.
    Downloads: 0 This Week
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  • 21
    The Hspell Project

    The Hspell Project

    A free Hebrew spell-checker and morphological analyzer

    hspell - Hebrew spellchecker
    Downloads: 0 This Week
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  • 22
    aioulinux

    aioulinux

    Linux for Arduino and Makers developers

    ...Graphic Designer: Talented individual for the style and layout of the user-friendly Aioulinux. Passionate about IoT and Arduino? Contribute to a secure Linux distribution. Let's collaborate and bring the new Aioulinux to life in 2024! Ready for a project recognized worldwide? Contact me. Let's make a mark together! Today, our distribution includes the following items: ===================
    Downloads: 0 This Week
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  • 23
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
    Downloads: 0 This Week
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  • 24
    KH Coder

    KH Coder

    Quantitative Content Analysis or Text Mining

    ************************************************************ THIS PROJECT IS MOVED. See http://khcoder.net/en for the latest & greatest. You can download this tool from the new home. See you there! ************************************************************
    Downloads: 0 This Week
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  • 25
    owfs and owhttpd

    owfs and owhttpd

    Project moved to https://github.com/owfs/owfs/

    Please note that OWFS source code, and all Issue/Tickets/merge requests have now been moved to https://github.com/owfs/owfs/. Developer mailing lists will still be kept at Sourceforge. ---- OWFS -- 1-Wire file system. Use the Dallas 1-Wire and iButton chips with standard filesystem commands. Create temperature loggers. Monitor everything. OWHTTPD -- same system, only used as a light weight web server. OWFS is also ported to embedded routers, Mac OSX and Windows. Basically you can use...
    Downloads: 6 This Week
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