Search Results for "parallel"
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Showing 14 open source projects for "parallel"
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Octave Forge
A collection of packages providing extra functionality for GNU Octave
Octave Forge is a central location for collaborative development of packages for GNU Octave. The Octave Forge packages expand Octave's core functionality by providing field specific features via Octave's package system. See https://octave.sourceforge.io/packages.php for a list of all available packages. GNU Octave is a high-level interpreted language, primarily intended for numerical computations. It provides capabilities for the numerical solution of linear and nonlinear problems, and... -
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Monte Carlo eXtreme (MCX)
Physically accurate and validated GPU ray-tracer
MCX is a GPU-accelerated, general-purpose, physically-accurate and feature-rich 3-D light transport simulator. It is one of the fastest simulators because it can use tens of thousands of GPU threads to simulate photons in parallel. -
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librsb
A shared memory parallel sparse matrix library including Sparse BLAS.
librsb is a library for sparse matrix computations featuring the Recursive Sparse Blocks (RSB) matrix format. This format allows cache efficient and multi-threaded (that is, shared memory parallel) operations on large sparse matrices. The most common operations necessary to iterative solvers are available, e.g.: matrix-vector multiplication, triangular solution, rows/columns scaling, diagonal extraction / setting, blocks extraction, norm computation, formats conversion. The RSB format is especially well suited for symmetric and transposed multiplication variants. ... -
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Optimizer_sovkov
Constructing and optimizing general mathematical and physical models
...Currently, the main focus of these is computational quantum mechanics, analysis and simulation of molecular spectra, and general-purpose approximants. The package provides the most reliable modern strategies for linear and non-linear model optimization, regularization, and hypothesis tests. Parallel computing is supported. -
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PeMSyn
Matlab/Scilab-FEMM based GUI to Assist the Design of Permanent Magnet
Release: PeMSyn 2.4 - 03.Sep.21 Requirements: - Matlab 2018a or later (with Parallel Computing Toolbox ) - Scilab 6.1.0 or later - FEMM 4.2 (21Apr2019 or later) Matlab/Scilab-FEMM based GUI to Assist the Design of Permanent Magnet Machines: - Surface Mounted PMSM: Inner Rotor / Outer Rotor - Inset Mounted PMSM: Inner Rotor / Outer Rotor - Spoke-Type PMSM: Inner Rotor - Coreless Machine - Different Slot types available - Permeance Coefficient Assistant --- No-Load and On-Load estimation for PC during the design process - Winding Wizard Assistant - Performance Simulator (FEMM Based) --- No-Load and On-Load parameters assessment considering armature reaction and saturation effects --- Torque Curve Capability assessment --- Parallel Processing (Matlab only) TUTORIAL included! ... -
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UmUTracker
A MATLAB program for 2D particle tracking or 3D DHM based tracking.
We present a versatile and fast MATLAB program (UmUTracker) that automatically detects and tracks particles by analyzing long video sequences acquired by either light microscopy or digital holography microscopy (DHM). Our program finds the 2D particle center position using an isosceles triangle transform and the axial position by a fast implementation of Rayleigh-Sommerfeld numerical reconstruction algorithm using a one dimensional radial intensity profile. *Updates v1.1: 2017/11/21- Bug... -
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diauxic growth model ensemble
An ensemble of models showing diauxic growth behavior
...Carbon catabolite repression (CCR) is the main mechanism controlling carbohydrate uptake in bacteria, and therefore also controlling whether or not different carbon sources are metabolized in parallel or sequentially. Although described as a paradigm of the regulation of bacterial metabolism, the underlying mechanisms remain controversial. The models in the ensemble can be categorized according to regulatory, stoichiometric, and physiological constraints and differ from each other on only a single aspect. We distinguish four groups of models: (1) flux balance models that only define reaction kinetics for substrate uptake and by-product excretion, (2) kinetic models without and (3) kinetic models with regulation on the metabolic and/or genetic level, and (4) resource allocation models. -
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Folder
Toolbox for modelling deformation in layered media in 2D
Folder is a tool to simulate and analyse the development of structures in mechanically layered media during layer parallel shortening or extension. It includes a graphical user interface that allows for easy designing of complex geometrical models, defining material parameters (including linear and non-linear rheology), and specifying type and amount of deformation. It also includes a range of features that facilitate the visualization and examination of various relevant quantities e.g. velocities, stress, rate of deformation, pressure, and finite strain. ... -
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OpenFlux2 is an extended version of OpenFLUX (https://sourceforge.net/projects/openflux/) - the modern MATLAB-based modelling software for 13C flux analysis (MFA). The following features were implemented in OpenFLUX2, which were not present in original software: integrated support for calculation and analysis of parallel labeling experiments (PLE), extended statistical analysis of parameter estimation results, calculation of fluxes and measurements correlation, structural identifiability analysis and elements of experimental design.
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DCTV
DUAL CONSTRAINED TV-BASED REGULARIZATION ON GRAPHS
...We use a flexible graph data representation that allows us to generalize the constraint on the projection variable. We show how this new formulation of the TV problem may be solved by means of fast parallel proximal algorithms. On denoising and deblurring examples, the proposed approach is shown not only to perform better than recent TV-based approaches, but also to perform well on arbitrary graphs instead of regular grids. The proposed method consequently applies to a variety of other inverse problems including image fusion and mesh filtering. -
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OpenRecon
OpenRecon is an open-source software library for image reconstruction.
Moved to https://bitbucket.org/bid/openrecon -
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Software for tracking and quantitatively analyzing the locomotion of multiple C. elegans worms in parallel. Worm Tracker is written in MATLAB.
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...Under the scientific interpreted language Octave, Octmesh allows using the Libmesh characteristics for the numerical simulation of partial differential equations on serial and parallel platforms.
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An open source,platform independent,technical web programming language using MATLAB in background, that supports 3-Tier Architecture (Web-Business-DB) including Distributed Computing and Parallel Processing via remote procedure calls and web services.
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