Search Results for "ware-soft"
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Showing 23 open source projects for "ware-soft"
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Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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ESPResSo
The ESPResSo package
...ESPResSo is controlled through Python, which makes it flexible for custom simulation setup and analysis. Its main value is giving soft matter researchers a versatile and extensible platform for studying many-particle systems beyond simple atomistic models. -
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HOOMD-blue
Molecular dynamics and Monte Carlo soft matter simulation on GPUs
...It was designed from the ground up for GPU acceleration, with a high-performance C++ and CUDA backend. The software is especially useful for nano-scale, colloidal, polymer, soft matter, and materials simulations. Its Python interface lets users build simulation and analysis workflows using familiar scientific Python tools. HOOMD-blue supports efficient parallel execution and has been used for large-scale GPU-based simulations. Its main value is combining a flexible Python user experience with strong GPU performance for modern particle simulation research. -
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LAMMPS
Public development project of the LAMMPS MD software package
...It is designed for high-performance computing and can run efficiently on desktops, clusters, and supercomputers. The software is widely used in materials science, chemistry, physics, nanotechnology, soft matter, and computational engineering. It supports many interaction models, including pair potentials, many-body potentials, reactive force fields, bonded interactions, long-range electrostatics, and user-extendable packages. LAMMPS is script-driven, so users can define simulation geometry, force fields, integration methods, output, and analysis behavior through input files. ... -
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DEVS-Suite Simulator
Component, CA, and CCA models; superdense time, ETL DB, testing, etc.
Integrated component-based and cellular automata (CA) Parallel DEVS simulator. Version: 8.0 [Aug `26], 7.0 [Jan `23], 6.1 [Apr. `21], 6 [Sep. `20] , 5 [Jul. `19], 4 [Mar. `18], 3 [Apr. `15], 2.1 [Feb. `09], 2 [`03] See PVM: Visual Persistent Hierarchical Component-based Modeler (https://acims.asu.edu/persistent-visual-modeler/ ) and CoSMoSim: hierarchical visual modeling, database model repository, families of models, statecharts, partial-code generation for XML/DEVS-Suite models... -
Cut Data Warehouse Costs by 54%BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
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DeepChem
Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, etc
DeepChem aims to provide a high-quality open-source toolchain that democratizes the use of deep learning in drug discovery, materials science, quantum chemistry, and biology. DeepChem currently supports Python 3.7 through 3.9 and requires these packages on any condition. DeepChem has a number of "soft" requirements. If you face some errors like ImportError: This class requires XXXX, you may need to install some packages. Deepchem provides support for TensorFlow, PyTorch, JAX and each requires an individual pip Installation. The DeepChem project maintains an extensive collection of tutorials. All tutorials are designed to be run on Google collab (or locally if you prefer). ... -
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ATLAS (Automatically Tuned Linear Algebra Software) provides highly optimized Linear Algebra kernels for arbitrary cache-based architectures. ATLAS provides ANSI C and Fortran77 interfaces for the entire BLAS API, and a small portion of the LAPACK AP
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PBSuite
Software for Long-Read Sequencing Data from PacBio
.... ----- PBHoney ----- Read The Paper http://www.biomedcentral.com/1471-2105/15/180/abstract PBHoney is an implementation of two variant-identification approaches designed to exploit the high mappability of long reads (i.e., greater than 10,000 bp). PBHoney considers both intra-read discordance and soft-clipped tails of long reads to identify structural variants. -
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Rigs of Rods
A 3D simulator game where you can drive, fly, and sail
Rigs of Rods is a 3D simulator game where you can drive, fly and sail various vehicles using an accurate and unique soft-body physics engine. Since 2014, the development continued at https://github.com/RigsOfRods/rigs-of-rods UPDATE: 10/30/2016: removed opencandy installers, replaced with zip files. -
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RSS - Radial Stretching System
OpenSource radial stretching system for the scientific community
The rapid and efficient development of soft active materials requires readily available, compact testing equipment. We propose a desktop-sized, cost-efficient, and open source radial stretching system as an alternative to commercially available biaxial and uniaxial stretching devices. It allows for doubling the diameter of an elastomer membrane while measuring the applied force. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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...Leocmach, M. & Tanaka, H. A novel particle tracking method with individual particle size measurement and its application to ordering in glassy hard sphere colloids. Soft Matter 9, 1447–1457 (2013). https://dx.doi.org/10.1039/C2SM27107A (http://arxiv.org/pdf/1301.7237.pdf)
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OpenTRV
Open-Source Thermostatic Radiator Valve
...The aim is to include at least one complete mechanical and software design for a replacement TRV head that can be retrofitted without any plumbing plus at least one simple boiler control to allow end-to-end open soft heating zoning, with the ability to connect to home automation system or the Net if required. -
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GPS Interactive Time Series Analysis
A software for processing and analyzing time series in Earth Science
Along with calculating basic statistics and quality parameters such as mean and variance, the soft-ware is capable of importing and visualizing different standard time series formats, determining and removing jumps and outliers, and makes numerical and publication quality graphical outputs. Bivariate statistical analysis (including correlation coefficient and linear regression) and time series analysis (including auto and cross-spectral analysis, wavelet power spectrum, spectrogram and periodicities) form the main analysis features of the software. -
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Voxel CAD. Open source voxel editing and analyzing software. Edit and create multi-material voxel objects. Simulate the dynamics in a quantitative physics sandbox to test engineering designs or make moving creatures. www.voxcad.com for videos.
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EPICS support for PI motor controllers (see http://www.physikinstrumente.com). Implemented using asynMotorDriver c++ class with the Asyn framework. (see http://www.aps.anl.gov/epics/modules/soft/asyn )
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PathMEN
A Java tool for mining pathway mentions from literature
PathNER is a tool for the identification of specific pathway mentions from biomedical literature. PathNER is built upon the GATE embedded framework.It's based on soft dictionary matching and rules-based detection. The dictionary is generated from ConsensusPathDB and Pathway Ontology and the rules are implemented in JAPE. Using PathNER, you can identify all occurrences of informative pathway names (e.g. 'the Wnt pathway'). PathNER can be used to assist studies that aim at uncovering associations between disease and pathways. -
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OpenRecon
OpenRecon is an open-source software library for image reconstruction.
Moved to https://bitbucket.org/bid/openrecon -
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Complete manufacturing automation platform for factory and process equipment. It includes multi-protocol communications (including Modbus/TCP), PLC soft logic, HMI, and tools for troubleshooting and installation in 4 comprehensive packages.
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Ray Watch is a cross-platform Ray Tracer written entirely in C++. Currently, the project supports basic primitives and all the finer stuff like reflection, refraction, specularity and soft shadows.
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Converts kml files (Google Earth) to wpt format (OziExplorer waypoint file). Written in Python, thus you'll need a Python interpreter to run the soft.
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This J2ME soft has data about Messier objects, galaxies, open and globular clusters and nebulas. Allows you to make an observation plan according to your interests, see Moon Phases of 2008 and Local Sidereal Time and Julian date. nochesky.googlepages.com
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Modware is an easy to use Perl library for querying and modifying genomic data in a Chado database. It provides a powerful link between BioPerl and Chado. This Chado API provides an intutitive way to use Chado from Perl.
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Life Science Identifier (LSID) resolution protocol, to locate biologically significant data over a network, within middle-ware providing a client A.P.I. for Life Science applications, and server software, for Industry data providers.
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Soft for ab initio and MD simulating of water system. Contains program for ICE: construct ice, specific monte-carlo simulation, proton rearrangement calculations; for PDB-water: calculate rotation energy profile, for Effective Fragment simulations.
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