Search Results for "data quality"
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Showing 143 open source projects for "data quality"
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Cookiecutter Data Science
Project structure for doing and sharing data science work
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work. When we think about data analysis, we often think just about the resulting reports, insights, or visualizations. While these end products are generally the main event, it's easy to focus on making the products look nice and ignore the quality of the code that generates them. Because these end products are created programmatically, code quality is still important! ... -
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Seurat
R toolkit for single cell genomics
Seurat is a comprehensive R toolkit for single-cell genomics analysis, introduced by the Satija Lab at NYGC. It supports quality control, normalization, clustering, integration of multimodal data (e.g., scRNA‑seq, spatial, CITE‑seq), and visualization. Seurat v5 introduces scalable workflows and spatial transcriptomics support, commonly used in academic and industry research for single-cell studies. -
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awesome-single-cell
Community-curated list of software packages and data resources
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc. List of software packages (and the people developing these methods) for single-cell data analysis, including RNA-seq, ATAC-seq, etc. Rapid, accurate and memory-frugal preprocessing of single-cell and single-nucleus RNA-seq data. Find bimodal, unimodal, and multimodal features in your data. -
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Grafana
Leading open-source visualization and observability platform
Grafana OSS is the leading open-source platform for visualization and observability. It enables teams to query, visualize, alert on, and explore telemetry data from multiple sources in a single interface. With support for 100+ data source plugins—including Prometheus, Loki, Elasticsearch, InfluxDB, SQL/NoSQL databases, and OpenTelemetry—Grafana helps teams correlate metrics, logs, and traces across applications and infrastructure. Users can build interactive dashboards with rich... -
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Traccar
Traccar GPS Tracking System
The Traccar software offers exceptional performance and stability, whether it is installed on Windows, Linux, or any other platform. The server can be hosted on-premise or in the cloud, and we provide various hosted options with professional support. Traccar stands out among GPS tracking systems on the market by supporting a vast array of protocols and device models. Whether you prefer low-cost, no-name GPS trackers or high-end, quality brands, Traccar enables you to choose from a wide... -
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PaperQA2
High accuracy RAG for answering questions from scientific documents
PaperQA2 is a package for doing high-accuracy retrieval augmented generation (RAG) on PDFs or text files, with a focus on the scientific literature. See our recent 2024 paper to see examples of PaperQA2's superhuman performance in scientific tasks like question answering, summarization, and contradiction detection. In this example we take a folder of research paper PDFs, magically get their metadata - including citation counts and a retraction check, then parse and cache PDFs into a... -
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J2ObjC
A Java to iOS Objective-C translation tool and runtime
J2ObjC is an open-source command-line tool from Google that translates Java source code to Objective-C for the iOS (iPhone/iPad) platform. This tool enables Java source to be part of an iOS application's build, as no editing of the generated files is necessary. The goal is to write an app's non-UI code (such as application logic and data models) in Java, which is then shared by web apps (using GWT), Android apps, and iOS apps. J2ObjC supports most Java language and runtime features required... -
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QUAST
Quality Assessment Tool for Genome Assemblies
QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A... -
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a R package. 'Qair' gives access to data bases used by air quality monitoring associations in France. It also contains functions to manipualte air quality datas.
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MathGL
A library for scientific data visualization
A free cross-platform library of fast C++ routines for the plotting of up to 3-ranged data. It can export to bitmap and vector EPS/SVG files. There are window interfaces (GLUT/FLTK/Qt) and console tools. MathGL can be used from C/Fortran/Python/Octav/Lua -
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LabPlot
Data Visualization and Analysis
LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone. -
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Grassroots DICOM
Cross-platform DICOM implementation
Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets. -
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GeigerLog
Python program for Geiger counters and Environmental Sensors
...Continues to support Geiger counters like GQ Electronic's GMC-300/500/600 , RadMon, RadPro, Gamma-Scout, audio-click and other low-cost Geiger counters, IoT devices, I2C based sensors, GQ EMF devices. GeigerLog reads data from devices, saves them to databases, prints to screen and plots as auto-updated, customizable graphs. Quality control using Statistics, Scatter, Poisson, FFT & Autocorrelation, and more. Gamma Spectra - can be displayed, calibrated, and evaluated in GeigerLog! The Raspberry Pi 4, 5 qualify as GeigerLog hosts. -
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JaxoDraw
JaxoDraw: Feynman Diagrams made easy!
JaxoDraw is a tool to generate Feynman diagrams in a mouse click-and-drag fashion. Graphs can be exported to a variety of graphics formats and arbitrary latex code can be used for labels to produce high-quality publishing-style figures. -
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Practically Random
statistical tests & psuedo- random number generators (RNGs, PRNGs)
Randon number generation & testing. The best suite of statistical tests for fast PRNGs anywhere. Multithreaded for speed, command line tools for automation, no upper limit on data size. Also, a variety of C++ pseudo-random number generators with well designed interfaces aimed at practical uses, not just research. -
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Text File Generator
Generate large text files for various testing purposes
Generate large text files with dummy data (i.e. for performance testing an app that needs to read a file). This is a console app. It allows to generate large files (you can specify the size in megabytes). There is a template which you can set to define how a single line should look like, e.g. you can make a CSV file from it. This can contain random words, random numbers and sequential numbers. It has a dictionary of English words which you can replace with your own set. You can... -
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JDiskMark
Java Disk Benchmark Utility
JDiskMark is a powerful and versatile disk benchmarking tool written in Java, designed to help accurately measure the performance of your storage devices across different operating systems. Whether you're testing HDDs, SSDs, or network drives, JDiskMark provides reliable insights into your disk's read and write... -
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TCNOpen
Components for IEC61375 standardised communication
...TCN (Train Communication Network) is a series of international standards (IEC61375) developed by Working Group 43 of the IEC (International Electrotechnical Commission), specifying a communication system for the data communication within and between vehicles of a train. It is currently in use on many thousands of trains in the world in order to allow electronic devices to exchange information while operating aboard the same train. TCNOpen follows the Open Source scheme, as the software is jointly developed by participating companies, according to their role, so as to achieve cheaper, quicker and better quality results. ... -
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OpenJUMP is a community driven fork of JUMP the "Java Unified Mapping Platform" GIS software. The original JUMP was developed by Vivid Solutions, released under GPL2 in 2003 and discontinued in 2006. During 2004 already some enthusiastic developers joined together to enhance further the features of JUMP. They launched an independent development branch called OpenJUMP. The name gives credit to the original JUMP development, and at the same time describes the objectives of this project to...
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Charmol
Program for molecular graphics
Charmol is a cross-platform GUI/command-line based program for making high-quality pictures of molecular structures, nowadays working on Linux, MacOS and Windows. As output, it produces POV-Ray rendered images or files in VRML format. Charmol is capable of making pictures containing: - from small- to large-size molecules - more molecules together (different settings possible) - orbitals using molden and fchk files (GTO functions up to 'h' angular momentum supported) -... -
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Statistics101 - Resampling Statistics
Use simulation to perform statistical analyses.
Statistics101 is an Integrated Development Environment (IDE) that uses a simple, powerful language called “Resampling Stats” to develop Monte Carlo programs to analyze and solve statistical problems. The original Resampling Stats language and computer program were developed by Dr. Julian Simon (https://www.juliansimon.com/) and Peter Bruce (https://www.scientificamerican.com/author/peter-bruce/) as a new way to teach Statistics to social science students. Of course, social science students... -
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CTK
CLIP Tool Kit (CTK)
CTK (CLIP Tool Kit) is a computational biology toolkit implemented in Perl, designed for analyzing CLIP sequencing data. It offers a streamlined pipeline from raw reads through peak calling and motif discovery. -
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Optimizer_sovkov
Constructing and optimizing general mathematical and physical models
We present the package Optimizer, aimed at constructing and optimizing general mathematical models of phenomena of versatile nature. It is written in the Matlab algorithmic language and is executed in the Matlab environment with partial functionality in Octave. The convenient visual interface and the detailed manuals are provided. The main benefit of the package is its capability to construct models of any level of complexity in a block-by-block manner. Elementary model blocks can be... -
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grafx - Extensible Java Graphics Package
Extensible Line-drawing & Polygon-filling Rasterization Libs for Java
Line-drawing and polygon-filling rasterization algorithms in Java. Simple 2D package and more complex 3D package with Z-buffering. Texture mapping not supported at the moment. Color interpolation for lines, Gouraud shading for polygons fully supported. Floating point vertex coordinates, not integer. Pixel-level aliasing, not endpoint aliasing. Doesn't use Bresenham line style! Works with all Java versions. No external dependencies. Suitable for study in academic institutions,... -
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MaxFEM
Software for electromagnetic simulation
MaxFem is an open software package for electromagnetic simulation by using finite element methods. The package can solve problems in electrostatics, direct current, magnetostatics and eddy-currents. Since version 0.4.0, MaxFEM requires Python 3. We have moved the installers to the MaxFEM website (see below). In order to improve MaxFEM, we will require you to fill out a simple form before downloading them.
