Search Results for "gnu linux" - Page 82
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Showing 6289 open source projects for "gnu linux"
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multipsq
Analysis of pyrograms form multiplex pyrosequencing experiments
A software for the classification of organisms based on results from multiplex pyrosequencing algorithms performed on the Pyro-Mark ID System (Qiagen). The assays can be designed using the software mpsqed available from https://sourceforge.net/projects/mpsqed/ Pyrosequencing can be applied for Single-Nucleotide-Polymorphism (SNP)-based pathogen typing or for providing sequence information of short DNA stretches. However, for some pathogens molecular typing cannot be performed relying on a... -
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Virtual Sound Level Meter
Virtual Sound Level Meter for analyzing calibrated sound files
This project is the MATLAB development of a virtual sound level meter. The program will read in a calibrated .wav file and allow the user to analyze it as one would analyze a sound field with a sound level meter. The software implements Fast, Slow, Impulse and LEQ; A, C and Flat Weighting; Ln and Noise Dose analysis; Octave and 1/3 Octave band analysis; high resolution FFT analysis and spectrograms. Band analysis can be made using fast FFT methods or slower, but ANSI standard... -
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AzConvert is an open source program to convert different scripts of Azerbaijani language (Latin, Arabic and Cyrillic) to each other. It's written in Qt.
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MID Adjust
Prepare reads with no MIDs or variable length MIDs for analysis
Prepare reads for Pyrotagger or QIIME analysis Pyrotagger only accepts sequencing reads that have MID sequences (a.k.a barcodes, tags), and all of them must have the same length. When you have no MIDs, or variable-length MIDs, MID Adjust appends new MIDs or extends existing ones to satisfy Pyrotagger requirements. New features include the ability to generate fake quality scores and to parse and generate QIIME mapping files. -
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Analysis of biochemical networks.
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LibreAquarium
An aquarium management software with a Simulation Model System
SME LibreAquarium is an Aquarium management system with a Simulation Model Engine (SME) that makes a prediction of the possible measurement values for the different pollutants that affect to these aquatics systems (NO3,PO4, Fe). The simulator consults the recorded analysis to calculate a prediction of the NO3, PO4, Fe, that the these aquatic system produce. It also uses a central (fish, plant and invertebrates) database to check if the actual parameters are Ok, depending on the species... -
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NeedlemanWunsch
Fast global sequence alignment for the masses!
MOVED TO GITHUB: https://github.com/noporpoise/seq-align Global optimal sequence alignment using the Needleman-Wunsch algorithm. Aligns DNA, RNA, protein sequence and more! See our sister project local alignment using Smith-Waterman: http://sourceforge.net/projects/smithwaterman/ -
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TreeGrOSS Forest Growth Simulation
Software for modelling tree growth
Tree Growth Open Source Software is a Java based version of the forest growth simulator for north west Germany BWINPro. -
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SEG-Y files need special compression because they don't compress well using gzip and the like. The code is cross-platform C++ using nothing else than standard system libraries. This is a spin-off from the OpendTect project (http://opendtect.org).
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Cross platform (python 2.5) tool for exporting data via SMTP (email) to an Endress-Hauser Fieldgate DM3 Server. This tool may be used with any MySQL database historian, even though it was originally an extension for mod_openopc.
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Tinybldlin is a GNU/Linux port written in python for Tiny PIC Bootloader (tinybldWin.exe) for Microchip PIC microcontrollers.
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ox_black_rhino
black_rhino is a multi-agent simulator for financial network analysis
This is the outdated code of black_rhino. The new version is maintained and hosted on github. Please see https://github.com/cogeorg/black_rhino -
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mesoFON
mesoFON is an individual-based mangrove forest model, a KiWi extension
mesoFON is an individual-based mangrove forest model. It is a Java implementation of the KiWi model done with RePast Simphony. It contains several new features: (1) You can add up to 10 species via the GUI. However, in principle, the number of species to be included programmatically is unlimited. (2) You can use a variety of growth functions via typing them in as a string on the GUI. (3) The model is transparent, sinc it comes with the Eclipse workbench of RePast. -
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tools4BCI
Various tools for Brain-Computer Interaction
Within this project we want to provide some tools maybe usable for Brain-Computer Interaction. This is also done in coorporation with bcistandards.org to establish some common ground for standardization processes. -
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siMacro is simple GUI tool for cell based genome wide siRNA screen data processing. It calculates statistical parameters such as Z score and robust Z score.
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VSMOExp
Ontologies, which are made up by standardized and defined controlled
Ontologies, which are made up by standardized and defined controlled vocabulary terms and their inter-relationships, are comprehensive and readily searchable repositories for knowledge in a given domain -
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CAMFR (CAvity Modelling FRamework) is a fast, flexible, friendly full-vectorial Maxwell solver. Although it can tackle general electromagnetic problems, its main focus is on applications in the field of photonics.
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Ardamon
Arduino-controlled thermostat and sensors management
Ardamon is an arduino and PHP based solution to replace your thermostat so you gain a open-source solution that is manageable online. It also offers statistics and can help regulate many sensors around your house -
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Unicode Conversion Gateway is a web-based proxy server to convert some of the Indian language web pages encoded in proprietary encodings into Unicode.Padma, a popular Firefox extension, is extended and reimplemented in PHP to create this proxy server
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A C++ library for Quadratic Programming which implements the Goldfarb-Idnani active-set dual method. At present it is limited to the solution of strictly convex quadratic programs. The project has moved to GitHub (https://github.com/liuq/QuadProgpp).
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OpenSQUID
Superconducting QUantum Interference Devices (SQUIDs) control software
OpenSQUID is a Python framework for the control of SQUID (superconducting quantum interference device) readout electronics. It currently supports the Star Cryoelectronics PCI-1000 electronics with PFL-100 and PFL-102 flux-locked loops. Simultaneous operation of both PFL-100s and PFL-102s from a single PCI-1000 is supported. More features are under development. The software is implemented in Python and aims to be easily integrated with user-defined measurement and control code. -
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OctoMap
Moved to new location: http://octomap.github.com/
A probabilistic, flexible, and compact 3D mapping library for robotic systems. OctoMap provides efficient occupancy grid mapping in 3D using octrees. OctoMap development has moved to http://octomap.github.com/
