Showing 610 open source projects for "simple java code"

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  • 1
    CSBB-v3.0

    CSBB-v3.0

    CSBB - Computational Suite for Bioinformaticians and Biologists

    CSBB is a command line-based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R, java, python and ruby in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code. CSBB is currently available on Linux, UNIX. Currently CSBB provides 18 modules focused on analytical tasks like performing upper-quantile normalization, interactive visualization and next generation sequencing pipelines. ...
    Downloads: 0 This Week
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  • 2
    The Teachingbox uses advanced machine learning techniques to relieve developers from the programming of hand-crafted sophisticated behaviors of autonomous agents (such as robots, game players etc...) In the current status we have implemented a well founded reinforcement learning core in Java with many popular usecases, environments, policies and learners. Obtaining the teachingbox: FOR USERS: If you want to download the latest releases, please visit: http://search.maven.org/#search|ga|1|teachingbox FOR DEVELOPERS: 1) If you use Apache Maven, just add the following dependency to your pom.xml: <dependency> <groupId>org.sf.teachingbox</groupId> <artifactId>teachingbox-core</artifactId> <version>1.2.3</version> </dependency> 2) If you want to check out the most recent source-code: git clone https://git.code.sf.net/p/teachingbox/core teachingbox-core Documentation: https://sourceforge.net/p/teachingbox/documentation/HEAD/tree/trunk/manual/
    Downloads: 0 This Week
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  • 3
    owfs and owhttpd

    owfs and owhttpd

    Project moved to https://github.com/owfs/owfs/

    Please note that OWFS source code, and all Issue/Tickets/merge requests have now been moved to https://github.com/owfs/owfs/. Developer mailing lists will still be kept at Sourceforge. ---- OWFS -- 1-Wire file system. Use the Dallas 1-Wire and iButton chips with standard filesystem commands. Create temperature loggers. Monitor everything. OWHTTPD -- same system, only used as a light weight web server.
    Downloads: 5 This Week
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  • 4
    chemfiles

    chemfiles

    Modern library for chemistry file reading and writing

    ...Running simulations produce enormous amounts of data, which has to be post-processed to extract physical information about the simulated system. Chemfiles provides an interface to access this information which is - unified: the same code will work with all the supported formats; - simple: the interface is easy to use and extensively documented. This is only a mirror of the main repository, development of chemfiles happens on Github, at https://github.com/chemfiles/chemfiles/
    Downloads: 0 This Week
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  • 5

    Construct2D

    COmputational fluid dyNamics STRUctured grid CreaTor for 2D airfoils

    Construct2D is a grid generator designed to create 2D grids for CFD computations on airfoils. The grids are generated in Plot3D format. The only required input file is the set of coordinates defining the airfoil geometry, using the same format as XFoil, the popular vortex-panel code for airfoil analysis. Construct2D can create grids with O topology (recommended for airfoils with a blunt trailing edge) or C topology (recommended for airfoils with a sharp trailing edge). Now available in...
    Downloads: 10 This Week
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  • 6
    This site hosts the source code for C++ version of the Broker for SBW, NOM module, advanced simulation suite, analysis applications and model editors.
    Downloads: 0 This Week
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  • 7
    FormScanner

    FormScanner

    FormScanner - Free OMR Software

    FormScanner is an OMR (Optical Mark Recognition) software that automatically marks multiple-choice papers. FormScanner not bind you to use a default template of the form, but gives you the ability to use a custom template created from a simple scan of a blank form. The modules can be scanned as images with a simple scanner and processed with FormScanner software. All the collected information can be easily exported to a spreadsheet.
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    Downloads: 125 This Week
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  • 8
    DicomReader is a simple Java Dicom files decipher. It handles headers and images within as well; data (headers and pixel-value images) will be saved into ascii clear text files. A pgm version of the image files is also provided.
    Downloads: 0 This Week
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  • 9

    jnum

    Java numerical classes for astronomy and more...

    Imagine Numerical Recipes in the 21st century. Fast object-oriented Java code for numerical analysis, with a special focus on astronomical application (coordinate conversions, WCS projections etc.)
    Downloads: 0 This Week
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  • 10
    Orkney

    Orkney

    Orkney Testframework

    Orkney is a small but powerful test framework for Java. Orkney executes tests that are structured into test groups, test cases and test steps. Test steps are used like bricks to create test cases while test groups collect test cases and other test groups to create a test suite. Test cases are written in a simple text language thus allowing composition of cases from test steps without deep programming knowledge.
    Downloads: 0 This Week
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  • 11
    A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
    Downloads: 0 This Week
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  • 12

    The Wily DNA Editor

    a tool to master DNA sequences, plasmids and restriction digests

    The Wiley DNA Editor is a simple tool to handle DNA sequence information up to 100 kbp using java script in your browser window. The main idea is to install nothing but start cloning. Here we handle the development and the bug reports. The Wiley DNA Editor can be used from our homepage - or the files available in the download section.
    Downloads: 0 This Week
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  • 13
    This is a very simple OpenGL visualization library with a 3D and 4D volume renderer. It can easily be reused in other projects (e.g. with medical volumes). It is just perfect for learning or great if you like to hack your own code.
    Downloads: 0 This Week
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  • 14
    Simple-Scrape is a simple web-scraping library that allows for programmatic access to HTML code. No further techniques are needed and the library is very compact and thus easy to use.
    Downloads: 0 This Week
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  • 15
    Easy-to-use Reverse Polish Notation (RPN) Java Library.
    Downloads: 0 This Week
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  • 16

    MOIRAI

    Simple Scientific Workflow System for CAGE Analysis

    Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data....
    Downloads: 0 This Week
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  • 17
    MYRA

    MYRA

    A collection of ACO algorithms for the data mining classification task

    ...It includes popular rule induction and decision tree induction algorithms. The algorithms are ready to be used from the command line or can be easily called from your own Java code. They are build using a modular architecture, so they can be easily extended to incorporate different procedures and/or use different parameter values. This project is now hosted at: https://github.com/febo/myra
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    Downloads: 2 This Week
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  • 18
    GTK+ IOStream

    GTK+ IOStream

    GTK+iostream, Data plots, ORB, Neural Networks, WSOLA

    Create GTK+ interfaces using IOStream style code. Its simple and quick! Also providing simple data plotting (similar to Matlab/Octave), ORB (Object Request Broker), and Neural Network computations. You can create GTK+ GUIs in a few lines of code. Labels<<"Thanks for reading"; (HBox<<Labels).show(); or even one line : (HBox() << (Labels()<<"Thanks for reading")).show(); Inline code destructs the classes, but leaves the widgets/callbacks operating. ...
    Downloads: 0 This Week
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  • 19
    Gnuplot Editor

    Gnuplot Editor

    Interactive gnuplot script editor

    Ever needed to tweak a gnuplot script and got annoyed by constantly changing the script file, run gnuplot and display the resulting image? The gnuplot editor generates a preview of the plot for every change you make and quickly allows to show the created image file with a simple keystroke. Lines with errors are highlighted in the code and gnuplot output is shown in a separate widget. In addition it features all basic editor options, syntax highlighting and menu macros for often used gnuplot options. The program is written in python (works with 2 and 3) with a Qt4 user interface, which makes it platform independent (tested in Linux, OS X 10.7 and Windows XP). ...
    Downloads: 3 This Week
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  • 20
    bel_fft

    bel_fft

    FFT co-processor in Verilog based on the KISS FFT

    bel_fft is a FFT co-processor that can calculate FFTs with arbitrary radix. It is a hardware implementation of the free software Kiss FFT ("Keep it simple, Stupid!"). The target was to allow a simple replacement of the software code with the hardware implementation. Therefore bel_fft comes with a software driver that is compatible with the Kiss FFT routines. bel_fft also has a modular architecture and allows interfacing different bus architectures. So far AMBA AXI, Altera's Avalon bus and the Wishbone bus are supported. ...
    Downloads: 1 This Week
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  • 21
    CSBB-v2.0

    CSBB-v2.0

    Computational Suite for Bioinformaticians and Biologists

    CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of biological experiments. CSBB is implemented in Perl, while it also leverages the use of R, java and ruby in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community, to get benefited by performing down-stream analysis tasks while eliminating the need to write programming code. CSBB is currently available on Linux, UNIX and Windows platforms. Currently CSBB provides 16 modules focused on analytical tasks like normalization, visualization, statistics, RNA-SEQ etc.
    Downloads: 0 This Week
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  • 22
    CalclipseMath

    CalclipseMath

    Java math expression parser and script interpreter

    CalclipseMath – CalM for short – is a math parser written in Java. With a few lines of code CalM enables your application to evaluate user-supplied mathematical expressions, such as "e^(sin .25pi)" and "(sqrt e)^(sqrt 2)". The standard configuration of the parser has a wide variety of mathematical operations, ranging from basic arithmetic, trigonometry, combinatorics, linear algebra and more.
    Downloads: 0 This Week
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  • 23
    BioFace is simple software for editing and analyzing DNA, RNA, and protein sequences that is written in Java using SWT and JFace as libraries. Opening GenBank, FASTA, EMBL, or simple sequence files and analizing these sequences can be done.
    Downloads: 0 This Week
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  • 24

    WrapImaJ

    Multi-platform API for Image Processing systems in Life Sciences

    WrapImaJ purposes to be a multi-platform wrapper for different Image Processing systems for: - using the Java programming language. The purpose of WrapImaJ is not to combine an exhaustive collection of all functionalities of different imaging system, but to offer a simple, concise Application Programming Interface (API) - allowing to develop imaging software, the source code of which is independent from the underlying imaging system on which it relies. ...
    Downloads: 0 This Week
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  • 25
    Ocean Optics Sample Pack

    Ocean Optics Sample Pack

    Sample code for Ocean Optics OmniDriver spectrometer device driver

    Sample code demonstrating how to use OmniDriver to drive Ocean Optics full range of spectrometers from C, C++, C#, Java, LabVIEW, Delphi, MATLAB and more.
    Downloads: 9 This Week
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