Search Results for "computing" - Page 6
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Showing 317 open source projects for "computing"
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Ergatis is a web-based utility used to create, run, and monitor reusable computational analysis pipelines, utilizing the Workflow engine. It contains pre-built components for common bioinformatics analysis tasks.
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Phoenix Cluster Project is an open cluster architecture. It is built using Gentoo Linux with RootFS shared between all nodes of the cluster. The main components are: Torque/Maui, Network Raid, Ganglia, LAMP Platform, KVM and GLSL for GPGPU.
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FreDec
Parallelized FREquency DEComposer algorithm
...After selection of the initial frequency candidates, the algorithm passes through all their possible combinations and estimates their multi-frequency statistical significance. In the end, it prints out the set of largest frequency tuples that were still found significant. The GPU computing is implemented through CUDA and brings a significant performance increase. It is still possible to run FreDec solely on CPU, if no suitable GPU device is available in the system. See the details of the underlying theory in Baluev 2013, MNRAS, V. 436, P. 807 The description of the algorithm itself can be found in arXiv:1309.0100. ... -
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FlowVR is an open source middleware tailored for high performance in situ data processing and analytics running on large parallel machines
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BriCS
SaaS for running simulation models in the cloud
The Bristol Cloud Service simulation runner is a cloud computing Software as a Service designed to enable users to quickly launch simulation code on Amazon AWS' Elastic Compute Cloud (EC2). BRiCS is written in Python using the Django framework and interacts with EC2 using the boto API. BriCS enables multiple simulation runs to be launched in parallel from a web browser. Model configuration (parameters) files are uploaded via the browser and results files are downloadable on completion. ... -
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Handles Hexahedral, Tetrahedral, Quadrilateral, and Triangle meshes. Lagrangian, Hierarchic, and Monomial finite elements. Interface to PETSc solvers, adaptive mesh refinement, and extreme portablility.
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LARA
Lightweight Architecture for boundedly Rational Agents
For the purpose of policy simulation in coupled social-ecological systems (e.g. energy supply), a credible modelling of actors – especially citizens – and their decision processes is needed. This requires a framework capable of handling high numbers of heterogeneous agents (several hundreds of thousands). LARA (Lightweight Architecture for boundedly Rational Agents) meets these requirements and fills the gap between frameworks without built-in psychological foundations and full-fledged... -
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ShoX is a scalable simulator for wireless networks written in Java. It is easy to install, configure and use, so that reliable and expressive scientific results can be gathered in a short time. Documentation: http://sourceforge.net/apps/mediawiki/shox
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psicode
An open-source quantum chemistry program package
PSI is an open-source program for computing molecular properties using high-accuracy, ab initio, quantum mechanical models. -
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An architecture development environment for distributed agent architectures for virtual and robotic agents with focus on human-robot interaction
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Compiere MFG+SCM Manufacturing Extended System (MES). Include Shop Floor Control, Supply chain management, Quality management, modbus interface, iReport barcode extension etc. Support batch and on demand manufacturing. Works alone or connected to ERP.
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PopED (Population Experimental Design) is a software tool for computing optimal experimental designs. The software has been developed with an emphasis on drug trials based on population models (non-linear mixed effects models).
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...Computational Geometry & Applications (Special issue) World Scientific, 2013. [2] I.Z.Emiris, V.Fisikopoulos, C.Konaxis, L.Peñaranda. An output-sensitive algorithm for computing projections of resultant polytopes. In Proc. 28th Annual Symposium on Computational Geometry (SoCG 2012), pp.179-188, Chapel Hill, USA.
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ViennaX
A flexible plugin execution framework for scientific computing in C++
Welcome to the project homepage of ViennaX, a high-performance scientific computing C++ framework for executing plugins. A plugin system allows to wrap already available functionality into reusable components, which can have data input and output dependencies via a socket system. Different scheduler kernels are available, supporting serial and MPI-based distributed executions, supporting task and data parallelism. -
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PolyBoRi is implemented as a C++ library for Polynomials over Boolean Rings, which provides high-level data types for Boolean polynomials. A python-interface yields extensible algorithms for computing Groebner bases over Boolean Rings.
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ossGathering
ossGathering collects information of the open source software.
ossGathering collects information of the open source software. And shows the information that is collected in a variety of ways. -
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LBP in multiple platforms
LBP implementation in multiple computing platforms (ARM,GPU, DSP...)
...This is a software toolbox that collects software implementations of the Local Binary Pattern operator in several platforms: - OpenCL for CPU & GPU - OpenCL for GPU (branchless) - C code optimized for ARM - OpenGL ES 2.0 shaders mobile GPUs - C code for TI C64x DSP core (branchless) - C code for TTA processor synthesis If you use the code somewhere, please cite: Bordallo López M., Nieto A., Boutellier J., Hannuksela J., and Silvén O. "Evaluation of real-time LBP computing in multiple architectures," Journal of Real Time Image Processing, 2014 -
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DReAMSim
Dynamic Re-configurable Autonomous Many-task Simulator
DReAMSim provides a simple simulation framework for modeling homogeneous and/or heterogeneous (re)-configurable processing elements in a large-scale distributed environment. In particular, DReAMSim enables users to model task scheduling techniques at a preliminary design stage in order to investigate their performance potential. The simulation framework makes it easy to extract various performance and resource utilization related statistics to study the behavior of different task... -
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birgHPCC
Rapid CUDA Cluster Deployment
birgHPCC is a major improvement over birgHPC (http://sourceforge.net/projects/birghpc/). While retaining the major functions of the original birgHPC, including automated computing cluster conversion and auto slots detection, the new version (birgHPCC) is capable of creating and configuring a compute unified device architecture (CUDA) computing cluster, hence the extra “C” in the name. In addition to the increase in image size (less than 2 gigabytes) and a new Linux base (previously Debian, now Ubuntu), CUDA-capable bioinformatics software programs, such as NAMD, HOOMD-blue, VMD, GPU-HMMER and GPU-BLAST, are pre-installed in birgHPCC, along with the CUDA driver, libraries and software development kit (SDK). ... -
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SAGA - Simple API for Grid Application. The OGF GWD-R.90 Standard (SAGA Core) Implementation(s). It comes with lots of middleware adaptors for cloud and grid middleware, like Globus, LSF, Condor, Sector/Sphere, EC2, SSH and more.
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FLENS (Flexible Library for Efficient Numerical Solutions) is a C++ library for scientific computing. It can be considered as a very convenient and --- at the same time --- extremely efficient interface for BLAS and LAPACK. But it is much more than this
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...Data collection can be achieved by one of these devices: PICADC (free Microchip PIC solution developed by me [will make publicly available soon]), MC Measurement Computing (MCC) board or any Sound Card with Line In or Mic input (used for spectral analysis).
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Simuquant
A quantum circuit simulator written in Scala
Simuquant is made to construct and simulate universal quantum circuits. It's GUI enables intuitive access and direct graphical feedback, making it useful in a classroom situation and the like. Simulation processing is done in parallel, utilizing parallel collections introduced in scala 2.9. This application has been created as part a bachelor-thesis at the Hamburg University of Applied Sciences. The thesis is available... -
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SPJS is a simple skeleton for creating job programs which can be executed on different CPU cores or can be submitted to a batch system or any other parallel computer farm.
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Blitz++ is a C++ class library for scientific computing which provides performance on par with Fortran 77/90. It uses template techniques to achieve high performance. Blitz++ provides dense arrays and vectors, random number generators, and small vectors (useful for representing multicomponent or vector fields).
