Search Results for "split"
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Showing 31 open source projects for "split"
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DifferentialEquations.jl
Multi-language suite for high-performance solvers of equations
This is a suite for numerically solving differential equations written in Julia and available for use in Julia, Python, and R. The purpose of this package is to supply efficient Julia implementations of solvers for various differential equations. The well-optimized DifferentialEquations solvers benchmark as some of the fastest implementations, using classic algorithms and ones from recent research which routinely outperform the “standard” C/Fortran methods, and include algorithms optimized... -
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OrdinaryDiffEq.jl
High performance ordinary differential equation (ODE)
This is a suite for numerically solving differential equations written in Julia and available for use in Julia, Python, and R. The purpose of this package is to supply efficient Julia implementations of solvers for various differential equations. The well-optimized DifferentialEquations solvers benchmark as some of the fastest implementations, using classic algorithms and ones from recent research that routinely outperform the “standard” C/Fortran methods, and include algorithms optimized... -
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Vedo
A python module for scientific analysis of 3D data
...Analysis tools like Moving Least Squares, mesh morphing and more. Tools to visualize and edit meshes (cutting a mesh with another mesh, slicing, normalizing, moving vertex positions, etc..). Split mesh based on surface connectivity. Extract the largest connected area. Calculate areas, volumes, center of mass, average sizes etc. Calculate vertex and face normals, curvatures, feature edges. Fill mesh holes. -
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JGPSTrackEdit
GPS track editor for editing tracks and planning (multiple) day tours
JGPSTrackEdit is a tool for editing gps tracks and planning (multiple days) tours (GPS track editor). An abritary number of tracks may be opened or created, tracks may be merged. A track may be splitted, reversed or edited (e.g. compressed and corrected). Points may be inserted or appended to a track (routing supported) or may be moved or deleted from a track. Maps of several providers are available, the default map is OpenStreetMap. Currently supported track formats: Garmin gpx... -
Atera all-in-one platform IT management software with AI agentsAtera’s AI agents don’t just assist, they act. From detection to resolution, they handle incidents and requests instantly, taking your IT management from automated to autonomous.
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Periodic Table Of Elements 4 Mathematica
generates nice period table from given data
PTE-1.5 is for Mathematica 11.1 (not mm14 - needs ver change fixing) PTE-1.4 and prev for Mathematica 4.0 linux PTE generates periodic tables from variable data (the data and layout can be changed for a particular subject). Includes Pauli Exclusion makers and some data. Charts can be browsed with an iPhone nicely (may need .jpg, .gif nicer). It's printable at a small size. Layout change un-restricted but is non-interactive. which is good and bad: it does the job. CreateModule... -
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PoseidonQ - AI/ML Based QSAR Modeling
ML based QSAR Modelling And Translation of Model to Deployable WebApps
- This Software was made with an intention to make QSAR building more efficient and reproducible. - Published in ACS, Journal of Chemical Information and Modeling . Link : https://pubs.acs.org/doi/10.1021/acs.jcim.4c02372 - Simple to use and no compromise on essential features necessary to make reliable QSAR models. - From Generating Reliable ML Based QSAR Models to Developing Your Own QSAR WebApp. For any feedback or queries, contact kabeermuzammil614@gmail.com - Available on Windows... -
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NetworkDesigner does the design of various impedance matching networks. The designs are useful for both solid state designs as well as vacuum tube/valve circuits. In the newest version, the filter design functionality has been split off and will appear as a separate app. This makes for a cleaner user interface, The latest version was made from the FOX toolkit, and it is included in the package. This is the latest stable version of FOX.
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PythonStarSplitter
A Python Script I made to split a starfield image into several layers.
A Python Script I made to split a starfield image into several layers. To be able to use the script, PixInsight with an installed Gaia data catalogue is required, as it needs the exported astrometry data text file. -
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openPOWERLINK
An Open Source POWERLINK Stack
openPOWERLINK is an Open Source Industrial Ethernet stack for communication in hard real-time. It can be operated as both, Managing Node (master) and Controlled Node (slave). With version 2.0, the source code has been cleanly split into an application-oriented user library and a time-critical stack driver. The latter may be moved to a dedicated communication processor or into a kernel module to deliver enhanced performance while still keeping the API in user space. A full documentation of the stack is available on the web site: http://openpowerlink.sourceforge.net The following page can be used to report a security vulnerability: https://sourceforge.net/p/openpowerlink/discussion/ -
Desktop and Mobile Device Management SoftwareDesktop Central is a unified endpoint management (UEM) solution that helps in managing servers, laptops, desktops, smartphones, and tablets from a central location.
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kAtomics
Geometric kernel for CAD programs using an atomic approach
This kernel uses a discrete approach where the geometry is split into "atoms" at a fixed resolution (e.g. 1µm). The aim is to make full use of the parallel processing capabilities of modern graphics hardware. -
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TreeGraph
Information Manager(split/analyze/compare/combine).
For Homepage, Blog, Family Tree, Database, C#|hjt|js|chm Editor. Convert hjt2xml, (c#)cs2xml, chm2xml, js2xml, xml2cs, xml2js, xml2hjt, cs2hjt, hjt2cs, cs2chm, hjt2chm. IE/Opera/Firefox/PocketPC supported. -
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SPARTA
Direct Simulation Monte Carlo (DSMC) Simulator
...The grid is used to group particles by grid cell for purposes of performing collisions and chemistry. Physical objects with triangulated surfaces can be embedded in the grid, creating cut and split grid cells. -
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Terra Incognita
GPS mapping and management software
...managing of waypoints or tracks saved in gpx and many other formats selected user defined map area for saving simplified and easy user interface downloading and saving maps on background automatic split of very large areas to many smaller map files -
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PRINSOW
STL viewer for 3D printing
Free Open Source STL viewer (GNU GPL / No installation required) by El mehdi Abbou-ou-cherif. -------------------------------------------------------------------------- PRINSOW provides minimalistic but yet important features as given below. It is heavily based on VTK 6.1 and Qt 5.4.1 libraries. It is the first author contribution in the field of free software so any comment is welcomed. -------------------------------------------------------------------------- P.S. To use the... -
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INTEGRATE: Calling gene fusions with exact fusion junctions and genomic breakpoints by combining RNA-Seq and WGS data. To download source code, reference manual and test case, please go to 'Files'. Also refer to 'Wiki' for details.
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SoftSV
Calling structural variations. The soft way.
SoftSV is a tool for the detection of small and large deletions, inversions, tandem duplications and translocations from paired-end sequencing data. It uses aberrant paired-end mappings to determine approximative breakpoint regions and refines the breakpoints by analysing soft-clipped sequences for potential split-reads. For more information about the algorithm and an evaluation, have a look at this publication: "Robust and exact structural variation detection with paired-end and soft-clipped alignments: SoftSV compared with eight algorithms" (PMID 25998133) Please cite this artilce if you used SoftSV in your publication. -
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ConvertMAS
ConvertMAS converts Chemical File Formats mol, mol2 and sdf.
ConvertMAS - molecule converter; use to convert Chemical File Formats. It works on mol, mol2 and sdf files. It converts single file to respective formats. It will split sdf file with multiple molecules into seperate single files of any desired format. Also ConvertMAS creates sdf files from joining of mol, mol2 and sdf files. This is stand alone application; hence no need of internet connectivity to get results. It will generate output files in less time. Various online tools are available for conversion of Chemical file formats; but ConvertMAS mainly works on mol, mol2 and sdf effectively. -
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mp3splt
utility to split mp3, ogg vorbis and FLAC files without decoding
mp3splt is a free utility to split mp3, ogg vorbis and FLAC files without decoding, selecting begin/end time; if file is an album, you can get splitpoints automatically from internet or a local cue, cddb file. It also splits Mp3Wrap and AlbumWrap archives. Supports splitting and trimming by silence detection. For mp3 files, both ID3v1 and ID3v2 are supported using original tags or user defined tags. -
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trafalgar.map
Open Street Map (OSM) tools, OSM/XML parser, tag extractor
...The parser reads directly from packed *.gz files and it is not needed to unpack the OSM/XML data files to the local disk. Now in 0.3.0: osm_tags: tag analyzer (like tag watch) osm_split: split osm file in single files for nodes, ways and relations and collect some meta information (will be used as input for other tools). osm_cut: create rectangular extracts tr_view: view tool for trafalgar files, including fast osmtoolz import filter, GPX an KML track import (see screenshots) There is a small script included which helps to transform from *.bz2 to *.gz using a named pipe (seems not to work for cygwin) -
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Create, check, annotate, merge, diff, split SBML (System Biology Markup Lanugage) documents. The latest version of semanticSBML is webbased with a RESTful interface.
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A set of very optimized tools for indexing/querying huge genomes/files. Provided so far: a very fast exact mapper, and an unconstrained split-mapper
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Altrans
Quantification of Splicing Events
...It requires a BAM alignment file from an RNA-seq experiment and an annotation file in GTF format detailing the location of the exons in the genome. It uses paired end reads where one mate maps to one exon and the other mate to a different exon and/or split reads spanning exon exon junctions to count “links” between two exons. When there are overlapping exons, these are grouped into “exon groups” and unique portions of each exon in an exon group are identified which are used when assigning reads to an exon. The link counts ascertained from unique regions are normalized with the probability of observing such a link given the insert size distribution which is referred to as link coverage. ... -
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mdl is a system of formal mathematics, which is split into 2 levels: a high-level language for human-readable representation of math and low-level language for trustworthy verification. Currently, as low-level language mdl uses metamath system.
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LaserFoam performs simulations of laser pulses using an adaptive split step Fourier method to solve the generalized nonlinear Schrödinger equation. It provides a graphical environment to run and visualize the results.
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NoBlast provides a new extended user friendly csv output format and offers an option to correct the statistics when split databases are used for NCBI BLAST programs (Blastn, Blastp, Blastx, Tblastn and Tblastx).
