Search Results for "open source assembly software source code" - Page 84
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Showing 4660 open source projects for "open source assembly software source code"
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EPLF
Electron Pair Localization Function
The Electron Pair Localization Function (EPLF) helps to understand chemical bonding in molecular systems. This code uses a modified formulation which allows the exact calculation of the EPLF for usual wave functions (HF,KS,CAS,...) -
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The Blast2SNP is able to pick out synonymous, non-synonymous mutations and indels from draft assembly sequences by performing BLAST search against the reference ORF sequences.
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CallSim
low-volume read processing base corrector
CallSim is a software application that provides evidence for the validity of base calls believed to be sequencing errors and it is applicable to Ion Torrent and 454 data. CallSim provides a final classification or rescue of a base/indel in reads, where putative variants have been identified via typical SNP/indel workflows. plots rendered by: JFreeChart library http://sourceforge.net/projects/jfreechart/ -
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Open Metaheuristic (oMetah) is a library aimed at the conception and the rigourous testing of metaheuristics (i.e. genetic algorithms, simulated annealing, ...). The code design is separated in components : algorithms, problems and a test report generator
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Error to trace to log to deploy. One click. No SSH.AppSignal links every error to the trace, the trace to the log, the log to the deploy that shipped it.
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Atlas2Cloud
Atlas2 Genome Analysis Pipeline on Amazon Web Services
This is the backend source code of the Atlas2-Cloud pipeline on Amazon which starts and terminates worker nodes, runs analysis and monitors worker instances. It is PRIMARILY meant to be used through Amazon Web Services (AWS) management console by looking for the public Atlas2-Cloud machine image. Alternatively, the code can also be used for running the pipeline from your computer. -
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OmniHelp is a cross-platform, browser-independent, tri-pane help viewer built in pure JavaScript and CSS with HTML 4. Some functions (such as help embedding) may in the future be in Java, C, or C++; CSH is fully supported. All code is under the LGPL.
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ShiVaSmiles
A slick interface to see various scale analysis algorithms in action.
The Shape Visualizer is intented to be an exploratory/educational tool making it quick and easy to see how various mathematical methods perform in analysing and selecting the various patterns present on an image. The main website is built as a wiki gathering info and examples on the various implemented algorithms. The combination of the application and its wiki intend to constitute a nice little pedagogic toolkit for multiscale analysis. Feel free to contribute code or wiki content ! -
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Software de Mapas de Argumentos con interfaz gráfica diseñado con el objetivo específico (aunque no excluyente) de analizar la estructura argumentativa de demostraciones matemáticas, utilizando el modelo de Toulmin. Además, el contenido de los elementos puede ser tanto texto como imágenes, lo que permite guardar como imagen expresiones matemáticas escritas en LaTeX (utilizando software de apoyo como KLatexFormula). Se puede imprimir el diagrama y exportarlo a formato imagen (varios...
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This is a collection of tools and a code library to assist engineers who are developing SystemVerilog based verification environments. Components include utility libraries, scoreboard and shutdown manager implementation, register tool, etc.
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QSAS plug-ins
Plug-ins for the space physics data analysis software QSAS.
The project is concerned with developing new plug-ins for the space plasma analysis software QSAS. The plug-ins are developed mainly for the Cluster II mission, Champ and Swarm. QSAS can be downloaded from: http://www.sp.ph.ic.ac.uk/csc-web/QSAS/ -
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The Aglets Software Development Kit (ASDK) is a framework and environment for developing and running mobile agents. Mobile Agents are a type of software agents that have the unique ability to transport themselves from one system to another. Doing so, an
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Tree Layout Helper
Generates 2D layouts based on tree structures
This .NET/Mono library provides some utilities for handling tree structures. Most importantly, it supports the display of tree structures as two-dimensional graphics. By using ready-made interfaces, you can specify the size of your nodes, and the Tree Layout Helper library will take care of placing those nodes appropriately. -
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Compilation of Physics Calculators
A compliation of Physics derived claculators
A NEW GUI VERSION WILL BE RELEASED SOON! Thank you for visiting the Physics Calculator, provided by PIezoSystems Inc., please visit their company website at https://piezosystems.org. For other downloads, please visit our github page, https://github.com/PiezoSystems. We hope that you find this program useful and easy to use, for troubleshooting, please email us, contact@piezosystems.org. If any bugs were found, please email us at bugs@piezosystems.org. -
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Lightning Planning Framework for ROS
ROS package implementing the Lightning Framework using OMPL
LightningROS is a ROS package implementing the Lightning Path Planning Framework. The code here was developed for ROS Feurte. For later ROS versions, see https://github.com/WPI-ARC/lightning_ros This approach uses a path library to store previous experience while allowing generality by also planning from scratch. Please see the paper below for more details: A Robot Path Planning Framework that Learns from Experience Dmitry Berenson, Pieter Abbeel, and Ken Goldberg IEEE... -
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Dedalo
dedalo is a 2d cad drawing software written in python3.
dedalo is a 2d cad drawing software written in python3. It is licensed under the GPLv3. Dedalo features: layers, snaps (endpoint, intersection, midpoint), line, polyline, rectangle, delete, polygon, rectangle, arc, circle, points, text, spline, freehand drawing. Move, scale, rotate, offset, cut, extend, hatch, dimension, copy. English, italian languages SVG read-write. Not all features all fully supported. For more information a user manual is provided(pdf format, italian). -
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jPeriodic
jPeriodic is a table of elements written in Java
jPeriodic is a simple table of elements coded in Java providing the user with the most common informations about each known chemical element. By clicking an element a popup will apear containing the selected elements attributes. Additionaly jPeriodic offers a small temperature converter which is able to convert between Celcius and Kelvin. Because jPeriodic is coded in Java the software is platform-independent, meaning you can run jPeriodic on Windows, Mac OS, Linux and many other... -
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This project contains MEDEUR related software projects. This project is initiated by the Openkaart-community (http://www.openkaart.org), NedHIS, NICTIZ (http://www.nictiz.nl) .
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Cherokee is a fully extensible and scriptable automation engine for any and all java applets. To make it work for your favorite java applet the most you have to do is write is two classes.
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Galois sub-hierarchy builder
Visualize Galois sub-hierarchy of 2d matrix
GSH builder is a free Galois Sub-Hierarchy visualization tool. The algorithm for calculating GSH is called Pluton and the present Java realization is based on two articles. "Efficiently computing a linear extension of the sub-hierarchy of a Concept Lattice" by Anne Berry, Marianne Huchard, Ross M. McConnell, Alain Sigayret and Jeremy P. Spinrad. "Performances of Galois Sub-hierarchy-building algorithms" by Gabriela Arevalo, Anne Berry, Marianne Huchard, Guillaume Perrot and... -
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QFlow is a dataflow framework written in Qt which allows interaction of QObjects in a dataflow graphs. Such a workflow can contain graphical modules(QWidgets) which would be displayed during the execution of graph and can interact with other QObjects. Framework consists of Designer and multiple plugins with modules.
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numerica
Basic numerical algorithms in c++
IMPORTANT: This project have been migrated to GitHub (https://github.com/krvajalmiguelangel/libnumerica) To use this or leave feedback, please visit github site instead. numerica implements some of the basic numerical algorithms about root-finding, interpolation, system of linear equations, integration, and ordinary differential equations. The aim is to be simple, code-readable and generic. New features of the recently approved c++11 are used. -
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Quantities.net is a physical quantities library for C#. It performs runtime checking for compatible dimensions in arithmetic operations. it separates the concepts of a dimensioned quantity and a unit, so that units are easily extensible.
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Linking BPA with RDA
This software system enables publication of ISA-Tab files to RDA.
BioPlatforms Australia (BPA) has funded a number of datasets generation initiatives around important research themes and scientific challenges faced by Australian researchers to provide a unique public resource for the benefit of Australian life sciences research. These large scale genomic, proteomic and metabolomic datasets are being generated and centrally managed by Bioplatforms Australia in collaboration with leading scientists, research institutes and government agencies. With the... -
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This project is a collection of utilities to boot and flash various TI DaVinci and OMAP processors, including DSP-only, ARM-only, and ARM+DSP devices.
