Showing 868 open source projects for "framework"

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  • 1
    Phaistos
    Phaistos is a framework for all-atom Monte Carlo simulations of proteins. It incorporates several advanced probabilistic models of protein structure for conformational sampling, efficient move-algorithms and the OPLS and PROFASI forcefields.
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  • 2

    Canon_ex

    Key Data elements and controlled vocabularies For Cardiology

    N.B This Project is DEPRECATED Canon contains an experimental collection of fields - key data elements (2700) and controlled vocabularies - Pick Lists (4000) for cardiology. It can be used for the construction of Electronic Medical Records and to produce structured Reports Is using the Phoenix - Elixir framework and as backend storage is using the Postgresql Database. Most vocabularies are from the Registries : CathPCI, Action, TVT, NICOR, IMPACT, ICD, CARDS, Echo Standards and Articles. For each field - definition, Pick List SNOMED, HL7, Loinc Codes can be stored. For the Reports the corresponding phrases in any language can also be stored. ...
    Downloads: 0 This Week
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  • 3
    MuPIF

    MuPIF

    Multi-Physics Integration Framework (MuPIF)

    Multi-Physics Integration Framework (MuPIF) is an integration framework, that will facilitate the implementation of multi-physic and multi-level simulations, built from independently developed components. The principal role of the framework is to steer individual components (applications) and to provide high-level data-exchange services. Each application should implement an interface that allows to steer application and execute data requests.
    Downloads: 0 This Week
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  • 4
    CoRoPa stands for Computational Rough Paths. The aim of CoRoPa is to provide a software framework for various ideas related to Rough Path Theory, including rough differential equations and the digital description of serial data streams.
    Downloads: 1 This Week
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  • 5
    Welsh Natural Language Toolkit
    ...The WNLT project delivers four core NLP modules; a) Word Segmentation for separating text into words b) Sentence Boundary Disambiguation for finding sentence boundaries c) Part of Speech Tagger for determining the part of speech of each word d) Morphological Analyser for identifying the root form (lemma) of words. The modules are written in JAVA and ‘wrapped’ for execution under the General Architecture for Text Engineering (GATE) framework. The project also includes CYMRIE an adapted version for Welsh of the GATE - ANNIE Named Entity Recognition (NER) application for a range of entities such as Persons, Organisations, Locations, and date and time expressions. Version 2.x The CYMRIE pipeline is accessible via a API, standalone GUI and CLI. The CymrIE pipeline has also been adapted for Twitter.
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  • 6

    QSdpR

    Viral Quasispecies Reconstruction software based on QSdpR algorithm

    This is a viral quasispecies reconstruction software for quasispecies assembly problem on mRNA viruses, which is based on a correlation clustering approach and uses semidefinite optimization framework. The software accepts a reference genome, a NGS read set aligned to this reference and set of SNP locations in the form of a vcf file and outputs an optimal set of reconstructed species genomes which describes the underlying viral population.
    Downloads: 0 This Week
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  • 7
    CalclipseMath

    CalclipseMath

    Java math expression parser and script interpreter

    ...CalM includes a script interpreter which is based on the math parser. The CalM scripting language lets you define your own functions and variables. These may be exported and used in other scripts. The scripting framework supports a component type called MComp (Math Component). MComps are implemented as Java classes and allow further extension to the scripting language. Please visit www.calclipse.com for more information about CalclipseMath and other Calclipse products.
    Downloads: 0 This Week
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  • 8
    GeoWE

    GeoWE

    GeoData Web Editing [core SIG Web]

    ...The main aim of this initiative is to move the strenghts usually linked to desktop GIS to a web environment, by leveraging open source technologies. This is a free software project that is part of the open source GIS world, and it is developed in Java using the Google Web Toolkit framework. The geowe-core is being developed using the following technologies: - GWT (Google Web Toolkit) - JBoss ERRAI Framework - Sencha GXT - GWT-OpenLayers
    Downloads: 5 This Week
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  • 9

    PADIC

    A multilingual Parallel Arabic DIalectal Corpus

    PADIC (Parallel Arabic DIalectal Corpus) is a multi-dialectal corpus built in the framework of the National Research Project "TORJMAN", led by Scientific and Technical Research Center for the Development of Arabic Language and funded by the Algerian Ministry of Higher Education and Scientific Research. PADIC is composed of 6 dialects: two Algerian dialects (Algiers and Annaba cities), Palestinian, Syrian, Tunisian, Moroccan) and MSA.
    Downloads: 4 This Week
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  • 10
    metasort

    metasort

    A metagenome assembler by reducing microbial community

    ...However, novel microbial communities extend far beyond the coverage of reference databases and de novo metagenome assembly from complex microbial communities still remains a great challenge. Here we present a novel experimental and bioinformatic framework, metaSort, for effective construction of bacterial genomes from metagenomic samples. MetaSort provides a sorted mini-metagenome approach based on flow cytometry and single-cell sequencing methodologies, and employs new computational algorithms to efficiently recover high-quality genomes from the sorted mini-metagenome by the complementary of the original metagenome. ...
    Downloads: 1 This Week
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  • 11

    LightPCC

    Parallel pairwise correlation computation on Intel Xeon Phi clusters

    ...This library is written in C++ template classes and achieves high speed by exploring the SIMD-instruction-level and thread-level parallelism within Xeon Phis as well as accelerator-level parallelism among multiple Xeon Phis. To facilitate balanced workload distribution, we have proposed a general framework for symmetric all-pairs computation by building provable bijective functions between job identifier and coordinate space for the first time.
    Downloads: 0 This Week
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  • 12
    GeOxygene
    GeOxygene aims at providing an open framework which implements OGC/ISO specifications for the development and deployment of geographic (GIS) applications. It is a open source contribution of the COGIT lab. at the IGN (the French National Mapping Agency).
    Downloads: 0 This Week
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  • 13
    Marvin Image Processing Framework
    Marvin is an image processing framework that provides features for image and video frame manipulation, multithreading image processing, image filtering and analysis, unit testing, performance analysis and addition of new features via plug-in.
    Downloads: 2 This Week
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  • 14
    LAMA

    LAMA

    Heterogeneous Software Development Accelerated

    LAMA is a framework for developing hardware-independent, high performance code for heterogeneous computing systems. It facilitates the development of fast and scalable software that can be deployed on nearly every type of system with a single code base. By using LAMA for their application, software developers benefit from higher productivity and stay up to date with the latest hardware innovations, both leading to shorter time-to-market.
    Downloads: 2 This Week
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  • 15

    PyMeG - Python Measurement GUI

    Make your complex measurements in an easy graphical way

    Inspired by the THz-Shaker (https://sourceforge.net/projects/hzdr/) PyMeG can be a more general and well structured framework as well as Graphical User Interface for measurements in several laboratories.
    Downloads: 0 This Week
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  • 16
    PMM-Lab

    PMM-Lab

    Predictive Microbial Modeling plug-in for KNIME

    ...Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). Users can apply PMM-Lab to proprietary or public data and create bacterial growth / survival / inactivation models. The framework can easily be extended to other model types, e.g. growth/no-growth boundary models. PMM-Lab has been initiated and provided by the Federal Institute for Risk Assessment - BfR (Berlin, Germany). The software is in Beta status. Before using the software you have to read and accept the license and disclaimer (https://sourceforge.net/p/pmmlab/wiki/Disclaimer/). ...
    Downloads: 2 This Week
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  • 17

    HZDR

    Scripts and programs (e. g. THz-Shaker) for work in HZDR

    Scripts for evaluation and whole programs for measurements from work in Helmholtz-Zentrum Dresden Rossendorf (www.hzdr.de). One main project was the THz-Shaker (incl. THz-LiveCam and THz-Viewer) as complete new measurement framework. See Code (https://sourceforge.net/p/hzdr/code/) for files. A special thing is the wrapped CsAPI for GaGe CompuScope cards (e. g. Octopus) into Python: https://sourceforge.net/p/hzdr/code/HEAD/tree/thzshaker/device/scope/csapi.py An example of usage can be found here: https://sourceforge.net/p/hzdr/code/HEAD/tree/thzshaker/device/scope/dualchannel/api.py
    Downloads: 0 This Week
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  • 18
    Avogadro

    Avogadro

    An intuitive molecular editor and visualization tool

    Avogadro is an advanced molecular editor designed for cross-platform use in computational chemistry, molecular modeling, bioinformatics, materials science and related areas. It offers a flexible rendering framework and a powerful plugin architecture.
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    Downloads: 5,756 This Week
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  • 19

    RTKSharp

    This is a port of LibRTK on C#, and into a small c/c++ library.

    ...RTKLIB consists of a portable program library and several APs (application programs) utilizing the library. This port includes only a library (.so or .dll) for the C/C++ language and a .dll for C#/.NET Framework. RTKSharp is compatible with Windows and Linux using the .NET/Mono Assembly withoout the need of recompilation/cross-building.
    Downloads: 0 This Week
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  • 20
    reacTIVision
    reacTIVision is a computer vision framework for the fast and robust tracking of markers attached on physical objects, and the creation of multi-touch surfaces. It was designed for the rapid development of table-based tangible user interfaces.
    Downloads: 46 This Week
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  • 21
    Taurus

    Taurus

    A python based User Interface library.

    The Taurus Project has *moved* to: https://github.com/taurus-org/taurus This SourceForge page is *outdated* and kept for historical reference only. Taurus is a python framework for control and data acquisition CLIs and GUIs in scientific/industrial environments. It supports multiple control systems or data sources: Tango, EPICS, ... New control system libraries and data sources can be integrated through plugins.
    Downloads: 0 This Week
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  • 22
    MGSyn

    MGSyn

    MGSyn - Automatic Synthesis for Industrial Automation

    MGSyn (Model, Game, Synthesis) is an open-source tool which integrates game-based synthesis into model-driven development for industrial control and automation. It is served for research and educational purposes. MGSyn has been originally developed by Department of Informatics (Unit 6), TU München and fortiss GmbH and is now maintained by fortiss GmbH. The software is released under the GNU General Public License Version 3.0 (GPLv3). Please download the tutorial for step-by-step...
    Downloads: 0 This Week
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  • 23
    MoRe4ABM

    MoRe4ABM

    Managing Ongoing RElationships for Agent-Based Modelling

    The purpose of MoRe4ABM - Managing Ongoing RElationships for ABM - is to support representing and analysing social networks in agent-based modeling. The library provides a large number of network generators and a comprehensive framework for network and node level measures. It integrates well with Repast Simphony and uses the JUNG library. More4ABM furthermore supports initialisation of geographically explicit networks using GIS.
    Downloads: 5 This Week
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  • 24
    Behaviour Control Framework

    Behaviour Control Framework

    A C++ framework that uses inhibition trees for behaviour control.

    The Behaviour Control Framework is a generic platform-independent C++ framework that implements a control architecture consisting of a hierarchical network of behaviour layers. These layers each contain behaviours that can inhibit one another and interact to achieve control. A full discussion of the structure and ideas behind this framework can be found in the Doxygen documentation that comes with the release.
    Downloads: 0 This Week
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  • 25
    MATSim
    MATSim is a framework for building multi-agent transport simulations. MATSim has moved to GitHub: https://github.com/matsim-org/matsim Source code and newer releases are now hosted at GitHub!
    Downloads: 3 This Week
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