Search Results for "python software" - Page 7
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Showing 627 open source projects for "python software"
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Coronavirus Tracker API
API for tracking the global coronavirus (COVID-19, SARS-CoV-2)
Provides up-to-date data about Coronavirus outbreak. Includes numbers about confirmed cases, deaths and recovered. Support multiple data sources. Specify source parameter with ?source=nyt. NYT also provides a timeseries! To view timelines of cases by US counties use ?source=nyt&timelines=true. Currently, 3 different data sources are available to retrieve the data. Worldwide Data repository operated by the Johns Hopkins University Center for Systems Science and Engineering (JHU CSSE). U.S.... -
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APBS
Biomolecular electrostatics software
This software has moved to http://www.poissonboltzmann.org/. -
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An Open Source IEC 61131-3 Integrated Development Environment, providing PLCOpen SoftPLC programming, CanOpen IO's, and SVG based HMI.
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PBTK Optimizer
Application for optimization of parameters in PBTK models
Physiologically based toxicokinetic (PBTK) modeling offers great promise in environmental risk assessment, potentially speeding up dose-response studies while minimizing animal testing. Some limitations exist in the PBTK field, such as difficulty of model development and a lack of application specific software tools to help modelers. Some parameters used in PBTK models, such as tissue weights, are easily measure. Other parameters can be determined through in-vitro experiments or through... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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The TRANSIMS Studio application is an integrated development environment for the TRansportation ANalysis and SIMulation System (TRANSIMS). Components include a run time environment to execute TRANSIMS in parallel, as well as a full featured GUI.
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C++QED
A framework for simulating open quantum dynamics
C++QED is an application-programming framework for simulating open quantum dynamics in general. It has demonstrated the ability to simulate full Master equation of up to several thousand, and quantum trajectories of up to several hundred thousand dimensions. The basic idea is to allow users to build arbitrarily complex interacting quantum systems out of free subsystems and interactions (elements), and simulate their time evolution with a number of available time-evolution... -
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Open Drug Discovery Toolkit (ODDT)
Modular and comprehensive toolkit for use in cheminformatics
Open Drug Discovery Toolkit (ODDT) is modular and comprehensive toolkit for use in cheminformatics, molecular modeling etc. ODDT is written in Python, and makes extensive use of Numpy/Scipy. You can use any supported toolkit united under common API (for reference see Pybel or Cinfony). All methods and software based on Pybel/Cinfony should be drop-in compatible with ODDT toolkits. In contrast to its predecessors, which were aimed to have minimalistic API, ODDT introduces extended methods and additional handles. ... -
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MCNPydE
MCNP data extraction and display software library
MCNPydE is a Python library for extracting data from MCNP output file. It requires Python, Matplotlib and Numpy. It is a data reduction tool for MCNP output for ease of results analysis and viewing. -
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RoboSchool
Open source software for robot simulation, integrated with OpenAI Gym
Roboschool is a set of open source robot simulation environments for reinforcement learning, created as an alternative to the Mujoco physics engine. It integrates with OpenAI Gym and provides a variety of continuous control tasks, including humanoid locomotion, quadrupeds, and robotic arms. The library is built on the Bullet Physics engine, making it accessible without the licensing requirements of Mujoco. Roboschool includes training scripts and examples for applying reinforcement learning... -
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Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
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RELEASE NOTE: Get raxmlGUI 2.0 at the NEW PROJECT LOCATION: https://antonellilab.github.io/raxmlGUI/ raxmlGUI is a graphical user interface to RAxML, one of the most popular and widely used software for phylogenetic inference using maximum likelihood. A userfriendly graphical front-end for phylogenetic analyses using RAxML (Stamatakis, 2006). Please cite: Silvestro, Michalak (2012) - raxmlGUI: a graphical front-end for RAxML. Organisms Diversity and Evolution 12, 335-337. DOI:...
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Software for exploring & solving polyform puzzles, written in Python. Includes solvers for: pentominoes/polyominoes, solid pentominoes, Soma cubes, polycubes, polyiamonds, polyhexes, polysticks, and more to come.
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Molecular Dynamics Studio
Molecular Dynamics Cell Construction
This is a collection of software modifications created to integrate NanoEngineer-1, PACKMOL and MSI2LMP for the purpose of easily creating molecular dynamics cells. NanoEngineer-1 is a molecular CAD software written by Nanorex and provides the user an easy way to create molecules, while the software modifications allow the user to type atoms using multiple force fields. PACKMOL can generate a random collection of molecules using the molecule templates from NanoEngineer-1 thus providing the... -
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Safe Harbor Deidentification
Safe Harbor Deidentification for medical documents
Phalanx - Deidentify Safe Harbor Deidentification Mode of Phalanx is an abridged pipeline of NLP annotators culminating in NER annotators which write output of text offsets. It uses the Safe Harbor deidentification method. -
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Pikon-Stelarium interface
Pikon-Stelarium interface to use with azimuthal mount
This is a full project to make an software-drived azimuthal mount for the Pikon telescope, it can be use for others telescope. This project include : . Some other parts to print to adapt to the Pikon . Python code for raspberry Needed parts for "as it" use : . 1 Raspberry (model A suit well) . 3 motors steppers . 3 steppers drivers . 1 BNO055 (the one from adafruit was used) . 1 Pikon driver . 1 GPS module Sofware requirement : . raspbian . python 3 . some python libraries -
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slurm-roll
Slurm Resource Manager for Rocks Clusters
Slurm is a replacement for other resource management software and schedulers like gridengine or torque. The slurm roll integrates very well into a rocks clusters installation. In the folder addons, there are a lot of useful rolls for rocks clusters 6.1 and 6.2. These rolls do not depend on slurm. Please see Discussion for further information and support -
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GEOMS2
Geostatistics and geosciences modeling software
GEOMS2 is a geostatistics and geosciences modeling software. Provides interface for grid (mesh), point, surface and data (non-spatial) objects. It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. -
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CMD Plot Tool
Calculates and plots Colour Magnitude Diagrams from Astronomical data
...It can handle multiple file formats (plain text, DAOPHOT .mag files, ACS Survey of Galactic Globular Clusters .zpt files) to generate professional and customised plots, without the usual steep learning curve. Development using Python, OOP and a formal software development lifecycle model (Agile) allowed for the creation of an application that can be deployed on multiple systems. It works “out of the box” and does not require any installation of development environments, additional libraries or resetting of system paths. The tool is available as a single application/executable file, with the source code, on Sourceforge. ... -
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Charting tools, backtesting tools, and data visualization tools for the most popular cryptocurrencies.
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Now maintained at github.com/spacepy/spacepy Space Science library for Python - contains superposed epoch classes, drift shell tracing, access to magnetic field models, streamline tracing, bootstrap confidence limits, time and coordinate conversions, etc.
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GDL - GNU Data Language, a free IDL (Interactive Data Language, see http://ittvis.com/idl/) compatible incremental compiler.
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D-Tailor
D-Tailor: automated analysis and design of DNA sequences
Recent advances in DNA cloning and synthesis technologies afford high throughput implementation of designed sequences into living cells. However, our ability to design sequences to interrogate multifactorial biological processes and further engineer biological functions is lagging behind. DNA-Tailor (D-Tailor) is a fully extendable software framework for biological sequence analysis and multi-objective sequence design. D-Tailor permits the seamless integration of an arbitrary number of... -
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My Beaglebone Black Project
show and configure
The Beaglebone Black project presented here is a software written by Python and Qt and is intended to show the simple control of inputs and outputs (GPIO), the graphic course of input signals GPIO, the configuration and sending and receiving of data via the UART interfaces, the display of the PIN configuration of the Beaglebone Black and the graphic display of the signal course at the analog inputs.
