Search Results for "python software"
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Showing 30 open source projects for "python software"
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Grassroots DICOM
Cross-platform DICOM implementation
Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets. -
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BioSig is a software library for processing of biomedical signals (EEG, ECG, etc.) with Matlab, Octave, C/C++ and Python. About 50 different data formats are supported.
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The MITK Workbench is a free, open-source application for medical image visualization, segmentation, registration, and much more. Beyond the Workbench application, MITK is a comprehensive C++ framework for medical image computing. It provides a modular foundation for extending the MITK Workbench with custom plugins or developing your own medical imaging applications and research prototypes.
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biblioAssist
python3 version of bibus
python3 version of bibus https://sourceforge.net/projects/bibus-biblio/ It is nothing more than "it works on Debian testing (bookworm) AMD64. " -
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Healthy Weight Test
Test your healthy weight
This program simply tells you whether you're at a healthy weight. It's available in Turkish and English. Please don't forget to star my app. -
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GrowthRates
Calculate growth rates from microplate reader output
The Bellingham Research Institute (BRI) develops and distributes software that is free of charge to academic and other non-profit organizations. GrowthRates is our software tool that simplifies the analysis of microplate reader output from microbial growth experiments without having to program in Python, R, or MATLAB. It automates the calculation of growth rate parameters, including rates, lag times, maximum population density. -
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...It has been developed in Python with a user-friendly interface for healthcare personnel. Thanks to Artificial Intelligence and deep learning methods, MELAGE has tools to estimate volumes of different regions of interest in both images. Moreover, it allows to perform linear, area and volumetric measurements in a very intuitive and easy way, being able to instantly see the segmented region in a new tab.
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medical image analysis
Libraries and command line tools for medical image processing.
This software provides libraries and command line tools for the processing and analysis of gray scale medical images. -
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BATS
Bayesian Adaptive Trial Simulator
A user-friendly, quick simulator for Bayesian Multi-Arm Multi-Stage Trials -
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The MeVisLab Community project provides add-on modules that extend the functionality of the MeVisLab software. The modules are provided and maintained by the MeVisLab developer community and can be compiled with the public MeVisLab SDK.
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PyTRiP
Python bindings and GUI for TRiP98
A python class and GUI for visualization of data generated by the medical treatment planning software TRiP. Project has been moved to http://github.com/pytrip/pytrip on 15.06.2016 -
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BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.
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SPADE
A toolkit for developing and deploying protein structure algorithms.
The Structural Proteomics Application Development Environment is a Python tool kit for developing and deploying bioinformatics applications. Handles graphics, analysis, and modeling of protein sequence and structure. Source and Win installers available. SPADE source code can be cloned from http://www.github.com/deaconjs/SPADE. -
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OpenCMISS-Zinc
A Library for Interactive Modelling and Visualisation
The OpenCMISS-Zinc Library (opencmiss.org/zinc), or Zinc, is a software library for building interactive graphical modelling and visualisation applications. Models are represented in Zinc as mathematical fields defined over domains, including finite elements with support for high-order basis functions, complex parameter mappings and time variation, and image-based fields. Further fields can be defined by mathematical expressions and algorithms on existing fields, including image... -
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PACS VM
ISO - Customized version of dcm4chee 2.17.3 for MySQL.
1. Add JBoss Application Server 4.2.3.GA for JDK 6. 2. Cleanup for Windows and deprecated files. 3. Off CONSOLE records - http://forums.dcm4che.org/jiveforums/thread.jspa?messageID=4787 -
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PyBact is an open source software written in Python for Bacterial Identification. The software generates simulated data matrix which accurately represents the probabilistic positive/negative results of the tested biochemical test.
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The goal of the See&Touch project is to design/implement a special mouse for disabled people, which allows a person to fully control a computer by using just vision and one single body movement. This project develops hardware, firmware and software.
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PyExPsiN is a Python crossplatform (Linux/Windows) module for made easy writing psychological experiments. Right now includes functions for DMTS (Delayed Matching to Sample), N-Back, Spatial N-Back, "Grammatical", Mixed Dots, Stroop, and more.
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""" E-Cell's source code repository has moved to GitHub! https://github.com/ecell The development of E-Cell now continues on GitHub. The Subversion repository was abandoned. """ E-Cell System is an object-oriented software suite for modeling, simulation, and analysis of large scale complex systems such as biological cells. It allows many components driven by multiple algorithms with different timescales to coexist in a model.
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qips is a software package for analyzing ChIP-seq ("Chromatin ImmunoPrecipitation on sequencing") data. It finds enriched regions of arbitrary lengths and is therefore especially suited for analyzing ChIP-seq of histone marks or polymerase.
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FreeBrain will be an application for the analysis of 2D neurophysiological signals, like heart-rate, EEG or eyemovements. It is aimed at those who want intuitive or free software and those who want a customizeble tool that can handle mixed datasets.
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With this Python module (based on C++ code) it is possible to create a Brain Comp. Interface (BCI) and herewith to get EEG data online and evaluate the data while receiving it. - Up to now, this tool relies on the Brain Vision Rec. as EEG software -
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The Open Source Health Information Platform is a Python implementation of openEHR electronic health record specifications http://www.openehr.org. Project website : http://launchpad.net/oship Analytics are at: http://www.ohloh.net/projects/oship
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This software is a tool for measurement kyphosis, lordosis and scoliosis. LoB Analytics was developed in Python.
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A feature rich Open Source Core Electronic Medical Record for small medical providers developed with Plone/ Python/ Zope. Core EMR functionalities: Patient History, Past Visits, Rx, Health Maint., Allergies, Labs, Vitals, Notes, and Procedures.
