Search Results for "java]" - Page 47
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Showing 4338 open source projects for "java]"
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FishingCNV
Copy number variation (CNV) detection in exome sequencing data
FishingCNV, a software tool developed at McGill University, is a tool for comprehensive analysis of rare copy number variations in high-throughput exome sequencing data. The inputs are standard coverage files produced by Genome Analysis ToolKit (GATK), and the output is a file containing putative CNVs. The program comes in 2 different releases * GUI version (FishingCNV_X.X.X.zip) * Command line version (FishingCNV_X.X_pipeline) Browse through our files to find the different releases. -
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LSA-Bot is a new, powerful kind of Chat-bot incentred on Latent Semantic Analisys. Using LSA it's possible to make relationships among words and vectors, permitting to realize an intelligent chat-bot that can understand human language and answer as
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MendelScan
Variant scoring and linkage mapping for family exome sequencing
MendelScan is a tool for prioritizing candidate variants in family-based studies of inherited disease. -
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Allows you to monitor the operation of a machine with communication with your PC via Serial, USB and the network. Monitora written in Java needs: JFreeChart, XStream, USBDevice, winjcomport(windows), RXTX(linux).
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Vodou
3D-HMI for factory automation
Vodou is 3 dimensional human machine interface for factory automation. Easy to use setup along with full physical simulation of the production asset is incorporated with Vodou. -
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HYDRA is an open-source, platform-neutral library for performing Markov Chain Monte Carlo. It implements the logic of standard MCMC samplers within a framework designed to be easy to use and to extend while allowing integration with other software to
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FlyDataAnalyzer
Software Tool for Processing and Analysis of Propagating Channel Measu
Software Tool for Processing and Analysis of Propagating Channel Measurements. Fly Data Analyzer is the university project (CTU in Prague). It is used in research measurements for input data validation and time synchronization. Test data you can find in download section. -
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TML - Text Mining Library for LSA & CMM
TML is a Java Library for LSA and extracting Concept Maps from text
TML has moved to http://www.villalon.cl/tml.html and the code to https://github.com/villalon/tml -
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AsphaltOpen is a project to visualize data collected during road asphalting operations. Asphalt contractors can use the software to visualize their operations, learn from the visualizations, and improve their processes continually.
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BioLemmatizer
Lemmatization tool for morphological analysis of biomedical literature
The BioLemmatizer is a domain-specific lemmatization tool for the morphological analysis of biomedical literature. It is tailored to the biological domain through integration of several published lexical resources related to molecular biology. It focuses on the inflectional morphology of English, including the plural form of nouns, the conjugations of verbs, and the comparative and superlative form of adjectives and adverbs. README:... -
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GDLEditor
Web-based editor for the Gateway Description Language (GDL).
Web-based editor for the Gateway Description Language (GDL). -
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The Penn Lambda Calculator is an interactive, graphics-based pedagogical software that helps students of linguistics and computer science practice the typed lambda calculus.
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MpcReader retrieves comet and asteroid orbital data in MPC format from the web and store it on your computer in different formats. The data is fetched from the MPC. The main job of MpcReader is to convert plain MPC data to the format needed for KStar
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astroDevice
Software platform for the control of astronomical instruments.
astroDevice is a software platform for the control of astronomical instruments (telescope mount, filter wheel, focuser and CCD) through a single interface. This platform manages any astronomical device through plug-ins. It can manage multiple devices of same type (eg two telescope mounts). astroDevice is an alternative to ASCOM and INDI by providing a common interface between each device type and astronomy software such as Starry Night, KStars, Skychart and Stellarium. The platform is based... -
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The LabLog is a free tool to document projects running in a lab and to manage experimentally obtained data and its metadata. LabLog interfaces to a mySQL database that stores this information. Allows easy searching and retrieval of once recorded data.
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GISBox by Citiviz
Ready-to-use appliance for GIS, Data Mining and Analysis, Modelling...
GISBox by Citiviz is a ready-to-use virtual appliance containing an assortment of powerful, free and open source GIS, Data Mining and Analysis, Modelling and Programming software and packages. The pre-configured and tested GISBox allows you to try and use in few minutes a variety of software used by data scientists, engineers, physicists, mathematicians, geomatics engineers, and geographers from around the globe, without installing anything more than once the Oracle VirtualBox™ software... -
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MatrixMaker
Custom substitution matrix creator
Create custom substitution matrices for BLAST protein search. Easy to use GUI based application. -
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locusvu
Tool for genomics;automates data retrieval from db;enables workflows
LocusVu is a novel Java based software tool that accepts a list of genomic loci (positions on the chromosome) as input and automates fetching of related information (cytogenetic band, gene name, OMIM data etc.) from public databases such as the UCSC genome browser database. It then enables multiple workflows on the retrieved results, like comparing multiple datasets (comparative genomics), viewing neighboring genes for a loci from within the tool itself, or graphically representing these results in bar / pie charts. ... -
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Parallel HRRT Deconvolution is a multithreaded ImageJ plugin for motion correction of PET brain images.
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ViSEN
Visualization tool for statistical epistasis networks
The objective of this project is to provide a graphical visualization for statistical epistasis. Pairwise and three-way epistatic interactions are measured using information gain and are represented using networks. -
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VisIVO Gateway Portlets
Portlets to submit VisIVO Server jobs
Portlets to submit VisIVO Server jobs to analyze and create customized views of 3D renderings from astrophysical datasets. -
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Open Java Weather API
Java weather API that provides uniform access to different sources.
...For more information, see WeatherService class. Java Documentation: http://openjavaweatherapi.sourceforge.net/javadoc/ Currently sample implementations for two providers are included: http://forecast.io and http://openweathermap.org . (**Requires Java Version 6 or Newer**)
