Showing 14869 open source projects for "gnu/linux"

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  • 1

    libCIGI

    C++ Library for the Common Image Generator Interface

    libCIGI (library for Common Image Generator Interface) is a lightweight header only library that provides interfaces for communication between CIGI hosts and image generators. Currently versions 3.0, 3.2 and 3.3 are supported as well as support for the *draft* V4.0 CIGI standard. Additional functionality to the base packet interfaces is provided through external classes so that to the packet headers have no further dependencies. Packet processing is kept simple and a couple of simple helper...
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  • 2

    Hyperspectral data analysis in R

    Handling and basic analysis of hyperspectral data in R

    The hsdar package contains classes and functions to manage, analyse and simulate hyperspectral data. These might be either spectrometer measurements or hyperspectral images through the interface of rgdal.
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  • 3

    Stanford Data Miner

    Tools for integration and analysis of heterogeneous immunological data

    An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans...
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  • 4
    SaVi satellite constellation visualizer

    SaVi satellite constellation visualizer

    Earth orbits and satellite coverage display in 3D on your laptop.

    SaVi - simulate Starlink, Iridium, Globalstar, O3b, GPS, Galileo and other satellite constellations, modify them, or design your own. Requires Tcl/Tk and Unix libraries; 3D viewing option requires Geomview running on X Window.
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  • 5
    Hydrogen Bond Analysis Tool (HBAT)

    Hydrogen Bond Analysis Tool (HBAT)

    HBAT 2 is migrated from PERL to Python.

    HBAT(Hydrogen Bond Analysis Tool) is a tool to automate the analysis of hydrogen bonds present in a PDB Structure file. HBAT 2 is migrated from PERL to Python. Latest Documentation: https://hbat.abhishek-tiwari.com/ Web Server Version: http://hbat-web.abhishek-tiwari.com Latest Github Release: http://github.com/abhishektiwari/hbat Citation: Tiwari, A., & Panigrahi, S. K. (2007). HBAT: A Complete Package for Analysing Strong and Weak Hydrogen Bonds in Macromolecular Crystal...
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  • 6
    Eleana

    Eleana

    Program for the analysis of spectroscopic data, in particular EPR(ESR)

    Eleana is a program for manipulating, modifying and analyzing various spectroscopic data, in particular electron paramagnetic resonance spectra. It allows you to import data from Bruker spectrometers such as Elexsys or EMX and data from any ASCII file or imported from the clipboard. The program is under constant development, but already has many functions implemented for spectral analysis. Some of the basic functions include: baseline corrections, filtering, spectral clipping, integration /...
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  • 7
    Resolver

    Resolver

    A general purpose high precision conversion utility for Java

    This is a Java port of my C++ conversion utility from Geodesica-SFX. Currently only Lengths and Areas are implemented. User can enter fractional or decimal values and set the number of divisions for the following...
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  • 8
    PlateEditor

    PlateEditor

    PlateEditor, a free web application to work with multi-well plates

    PlateEditor is a free web application to work with multi-well plates, from creation of layouts to data visualization and aggregation. It is primarily designed as a tool to help scientists working in the field of biology to simplify and fasten the process of data analysis. It is fully client-side: files are never transferred to the server, ensuring complete security and privacy of research data. It doesn't require any installation. - PlateEditor is available at this...
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  • 9
    glslmath

    glslmath

    C++ header-only library that simulates GLSL math

    GLSLmath provides C++ math operations as defined by GLSL. For example, it provides methods to easily setup viewing transformations and perspective projections. GLSLmath has been inspired by the glm and slmath libraries, which aim to mimic GLSL, but in contrast to those GLSLmath does not focus on a complete conforming implementation of GLSL. It rather aims to provide a convenient single header file that implements the most commonly used subset of GLSL so that it is easy to use for rapid...
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  • 10
    Data Envelopment Analysis using Stata

    Data Envelopment Analysis using Stata

    Develop a user written Data Envelopment Analysis package in Stata.

    The goal of this project is to develop a Data Envelopment Analysis(DEA) program using Stata programming language. This is the replacement of "deastata" project that we maintained for the purpose of version management. We call the program package "DEAS" which stands for Data Envelopment Analysis using Stata. DEAS covers the basic models of DEA and extensions including CCR, BCC, SBM, Super-efficiency Model, Allocative Model(Profit, Revenue, Cost), (Global) Malmquist Productivity Index...
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  • 11
    grafx - Extensible Java Graphics Package

    grafx - Extensible Java Graphics Package

    Extensible Line-drawing & Polygon-filling Rasterization Libs for Java

    Line-drawing and polygon-filling rasterization algorithms in Java. Simple 2D package and more complex 3D package with Z-buffering. Texture mapping not supported at the moment. Color interpolation for lines, Gouraud shading for polygons fully supported. Floating point vertex coordinates, not integer. Pixel-level aliasing, not endpoint aliasing. Doesn't use Bresenham line style! Works with all Java versions. No external dependencies. Suitable for study in academic institutions,...
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  • 12
    Sparx' EA - MDG for TRAK

    Sparx' EA - MDG for TRAK

    MDG for Sparx' Enterprise Architect to Create TRAK arch. descriptions

    Custom add-in (MDG technology) for Sparx Systems Enterprise Architect UML modelling tool (https://sparxsystems.com/products/ea/index.html) to create architecture descriptions using TRAK https://sf.net/projects/trak Provides: - the set of TRAK views that can be represented using UML and SysML . Each view display a custom toolbox palette with the objects and relationships that are needed for that TRAK view - relationships can be made directly from the objects on a view using the...
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  • 13

    srcpd: modular SRCP server

    SRCP system daemon

    The srcpd is a gateway between any kind of model railway systems and user interface programs that support the Simple Railroad Command Protocol SRCP.
    Downloads: 5 This Week
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  • 14

    pychoacoustics

    Python platform for running and building psychoacoustics experiments

    pychoacoustics is a platform for running and building experiments on auditory perception. Further info can be found on the project webpage http://samcarcagno.altervista.org/pychoacoustics/pychoacoustics.html
    Downloads: 0 This Week
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  • 15

    emid

    emid is a Python program for voice emotion identification experiments.

    emid is a Python program for voice emotion identification experiments. Further info can be found on the project webpage: https://samcarcagno.altervista.org/emid/emid.html
    Downloads: 0 This Week
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  • 16

    hash_val_4_Bloom

    search for hash values used in Bloom filter for QNR membership

    FenderBender -- on MersenneForum.org "Determine Squares" -- came up with using Bloom filter to detect Quadratic non-residues modulo small primes in order to reject what inputs are certainly not square roots. This reduces, by > 99%, the amount of actual square root calc's done and therefore is more efficient and faster. Search fur 32-bit vs 64-bit, hash values that make "perfect" Bloom filter. Variety of (simple) hash functions, requiring 2, 3, 4 or 5 hash values. Hideously vast search...
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  • 17
    TorchQuantum

    TorchQuantum

    A PyTorch-based framework for Quantum Classical Simulation

    A PyTorch-based framework for Quantum Classical Simulation, Quantum Machine Learning, Quantum Neural Networks, Parameterized Quantum Circuits with support for easy deployments on real quantum computers. Researchers on quantum algorithm design, parameterized quantum circuit training, quantum optimal control, quantum machine learning, and quantum neural networks. Dynamic computation graph, automatic gradient computation, fast GPU support, batch model terrorized processing.
    Downloads: 0 This Week
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  • 18

    pysoundanalyser

    a python program to generate, visualize, and manipulate short sounds

    pysoundanalyser is a Python application that can be used to generate, visualize, and manipulate short sounds through a graphical user interface. Visualization functions include visualization of the power spectrum, the spectrogram, the autocorrelation, and the autocorrelogram of a sound. Manipulation functions include filtering, concatenating, cutting, and scaling the level of a sound. Several types of sounds can also be generated including, pure tones, harmonic complex tones, noise of...
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  • 19
    BOINC Control Script for Linux/BSD
    A small BOINC control script for Linux and the BSDs. Useful if there's no GUI on the crunching system yet you still want to easily monitor and control BOINC. Requires BOINC version 7.22 or higher.
    Downloads: 0 This Week
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  • 20
    TimingEditor

    TimingEditor

    TimingEditor is a tool to graphically draw and edit timing diagrams.

    TimingEditor is a tool to graphically draw and edit timing diagrams.
    Downloads: 19 This Week
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  • 21
    com-hfg

    com-hfg

    java library for XML, HTML, or SVG generation + bioinformatics classes

    The com.hfg (hairyfatguy.com) library is a collection of utility classes that make it easy to construct XML, HTML, XHTML, or SVG in an object-oriented way from within your Java application or webapp. It also contains other IO utilities and bioinformatics classes for phylogenetic trees, taxonomy, and multi-chain proteins. Requires JDK1.8.
    Downloads: 0 This Week
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  • 22
    bidict

    bidict

    The bidirectional mapping library for Python

    Depended on by Google, Venmo, CERN, Baidu, Tencent, and teams across the world since 2009. Familiar, Pythonic APIs that are carefully designed for safety, simplicity, flexibility, and ergonomics. Lightweight, with no runtime dependencies outside Python's standard library. Implemented in concise, well-factored, fully type-hinted Python code that is optimized for running efficiently as well as for long-term maintenance and stability. Extensively documented. 100% test coverage running...
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  • 23
    A "gumbo" of tools and concepts supporting rich client applications with 2D/3D user interfaces. Expands on the code from the book "3D User Interfaces with Java 3D", and includes a generous contribution of RCP code from Meyer Sound. Recent work includes a Norden bombsight simulator, with terrain rendering based on NASA's WorldWind SDK. For this effort YourKit has generously made available its full-featured Java Profiler (https://www.yourkit.com/java/profiler/index.jsp), which has proved...
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  • 24
    CAMPARI

    CAMPARI

    Software for molecular simulations and trajectory analysis

    We are proud to introduce version 5 of CAMPARI. We have added a number of new features, most notably a Python interface for interpreting user-supplied code (with the help of ForPy), a novel trajectory storage standard (with the help of libpqxx/PostgreSQL), and a module for performing transition path theory. Naturally, CAMPARI continues to provide the reference implementation of the ABSINTH force field paradigm and implicit solvation model. CAMPARI is a joint package for performing and...
    Downloads: 9 This Week
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  • 25
    HOL is a system for proving theorems in Higher Order Logic. It comes with a large variety of existing theories formalising various parts of mathematics and theoretical computer science.
    Downloads: 8 This Week
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