Showing 14870 open source projects for "linux-debian"

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  • 1
    JMEScriptGUI

    JMEScriptGUI

    Pequeño IDE para el lenguaje JMEScript.

    Con este IDE podrá probar cualquier script escrito en JMEScript con toda la funcionalidad del lenguaje, incluidos gráficos 2D y conexión MySQL. La versión para Android, en este momento, tiene menos funcionalidad y ejecuta la versión 0.1 de JMEScript. Parser JME y lenguaje JMEScript en https://sourceforge.net/projects/jme/ Documentación en https://morenobarrientos-jme.site44.com/ Código fuente y UDL para Notepad++ en pestaña 'FILES'
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  • 2
    StatAnt

    StatAnt

    The package for statistical data analysis

    Aspire to perfection. StatAnt is a standalone cross-platform application for statistical data analysis. Completely free. No donations required. Comes with absolutely no warranty. Rating: Everyone (All ages). MEDICAL DISCLAIMER: This software is not certified for use in healthcare and should not be used for diagnostic or treatment purposes. NOTICE FOR EU RESIDENTS: This software is NOT compliant with EU regulations, including GDPR and the AI Act. It is not intended for use within the...
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  • 3

    libCIGI

    C++ Library for the Common Image Generator Interface

    libCIGI (library for Common Image Generator Interface) is a lightweight header only library that provides interfaces for communication between CIGI hosts and image generators. Currently versions 3.0, 3.2 and 3.3 are supported as well as support for the *draft* V4.0 CIGI standard. Additional functionality to the base packet interfaces is provided through external classes so that to the packet headers have no further dependencies. Packet processing is kept simple and a couple of simple helper...
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  • 4

    SAGECAL

    GPU/MIC accelerated radio interferometric calibration program

    SAGECal is a very fast, memory efficient and GPU accelerated radio interferometric calibration program. It can handle all source models including points, Gaussians and Shapelets. It can calibrate along hundreds of directions without running out of memory in almost real time. Intel Xeon Phi acceleration is also available. Distributed calibration using MPI and consensus optimization is enabled. Also tools to build/restore sky models are included.
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    DEEP

    Differential Evolution Entirely Parallel Method

    The Differential Evolution, introduced in 1995 by Storn and Price, considers the population, that is divided into branches, one per computational node. The Differential Evolution Entirely Parallel method takes into account the individual age, that is defined as the number of iterations the individual survived without changes. The introduced improvements are: (I) allow several oldest individuals to be overwritten by the same number of best ones in the population, (II) new selection rule uses...
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  • 6

    Biogenesis Color Mod

    Mod for evolution simulation and artificial life program Biogenesis

    You can download the Color Mod at the Biogenesis main site too (included in the main download now). You also find the sourcecode there. If you want to post a review, remember that this is only a modification, so comment on my changes, not on the simulation. Original project by Joan Queralt Molina: https://sourceforge.net/projects/biogenesis/ Includes Tyler Colemans "Features Mod": https://sourceforge.net/projects/biogenesisfeatu/ Biogenesis discussion...
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  • 7

    Hyperspectral data analysis in R

    Handling and basic analysis of hyperspectral data in R

    The hsdar package contains classes and functions to manage, analyse and simulate hyperspectral data. These might be either spectrometer measurements or hyperspectral images through the interface of rgdal.
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  • 8
    Gemi

    Gemi

    PCR primers / probes design from multiple & degenerate sequences

    Please, do not hesitate to contact us if you need help. https://sites.google.com/view/hsa23/ Gemi, an automated, fast, and easy-to-use bioinformatics tool with a user-friendly interface to design primers and probes for polymerase chain reaction (PCR). Gemi accepts multiple aligned and long DNA and RNA sequences with degenerate nucleotide (non-A/C/G/T bases). Gemi can be used for quantitative, real-time and conventional PCR (qPCR, rt-PCR, etc.), and Sanger sequencing. Gemi can parse large...
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  • 9

    Stanford Data Miner

    Tools for integration and analysis of heterogeneous immunological data

    An extensive description of this system is published in the Journal of Translational Medicine (http://www.translational-medicine.com/). In brief, the system consists of two main web applications, a data integration app and a data exploration app. The data integration app is a fully custom Java "Web 2.0" product called Sherpa. Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans...
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  • 10

    BIGSdb

    Software for storing and analysing bacterial sequence data

    The Bacterial Isolate Genome Sequence Database (BIGSdb) is a scalable, web-accessible database system designed to store and analyse linked phenotypic and genotypic information in a computationally efficient manner. Sequence data can range from single sequence reads to multiple contigs generated by whole genome sequencing technologies. The system incorporates the capacity to define and identify any number of loci and genetic variants at those loci within the stored nucleotide sequences. ...
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  • 11
    GluCat: Clifford algebra templates

    GluCat: Clifford algebra templates

    Calculation with Clifford algebras: C++ library and Python module

    GluCat is a generic library of C++ templates that implement universal Clifford algebras over the field of real numbers. The PyClical extension module for Python gives users an easy Python scripting interface for calculations in Clifford algebras. The name PyClical is an homage to Pertti Lounesto's CLICAL.
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  • 12
    No-code system is for the visual creation of structural-functional models and the automatic generation of R language simulation models. The program can be used to describe information, production, organizational, and other processes. For graphical representation, the EdPM/EPM notation is used, which allowed us to implement: - structural-functional modeling using graphical methods; - the study of the efficiency of structural-functional models using simulation methods, that allow (e.g....
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  • 13
    LabRPS

    LabRPS

    Random phenomena generator

    This is an official mirror of LabRPS. Code and release files are primarily hosted on https://github.com/LabRPS/LabRPS and mirrored here LabRPS aims to be a tool for the numerical simulation of random phenomena such as stochastic wind velocity, seismic ground motion, sea surface ... etc. It can be in a wide range of uses around engineering, such as random vibration or vibration fatigue in mechanical engineering, buffeting analysis in bridge engineering.... LabRPS is mainly to assist...
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  • 14

    33

    A project on topography and weather comparison

    33 starts out to gather topographic information to compare different locations on key measures like Height Above Sea Level, Geographical Latitude, Aspect (ST_Aspect), Slope (ST_Slope), Terrain Ruggedness Index (TRI, ST_TRI/ST_Roughness), Topographic Position Index (TPI, ST_TPI), or Hill Shade (ST_HillShade). Ultimately intended to make a comparing decision on suitability for agriculture. We will see how far we get or if we surpass it even, e.g with weather data and more. Why 33 as the...
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  • 15
    Eleana

    Eleana

    Program for the analysis of spectroscopic data, in particular EPR(ESR)

    Eleana is a program for manipulating, modifying and analyzing various spectroscopic data, in particular electron paramagnetic resonance spectra. It allows you to import data from Bruker spectrometers such as Elexsys or EMX and data from any ASCII file or imported from the clipboard. The program is under constant development, but already has many functions implemented for spectral analysis. Some of the basic functions include: baseline corrections, filtering, spectral clipping, integration /...
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  • 16
    gendasm

    gendasm

    Generic Code-Seeking Diassembler with Fuzzy-Function Analyzer

    GenDasm is a Generic Code-Seeking Diassembler engine. It allows you to enter known starting vectors for a given code image for the micro. It will disassemble the code and follow through branches to assist in the separation of code and data. Its included Fuzzy Function Analyzer companion uses a DNA Sequence Alignment Algorithm to locate similar code in multiple binaries to facilitate reverse-engineering and/or code recovery. The original purpose of the Fuzzy Function Analyzer was to...
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  • 17
    SimPET

    SimPET

    A web platform for the MC simulation of realistic brain PET data

    SimPET (http://www.sim-pet.org) is an open, efficient, and user‐friendly online platform for the generation of synthetic brain PET datasets. The platform offers the ability to generate realistic activity and attenuation maps from patient's PET/CT and MRI images. These maps can then be simulated, and sinograms and simulated images can be downloaded. More advanced features can be obtained by using the SimPET...
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  • 18

    Optimizer_sovkov

    Constructing and optimizing general mathematical and physical models

    We present the package Optimizer, aimed at constructing and optimizing general mathematical models of phenomena of versatile nature. It is written in the Matlab algorithmic language and is executed in the Matlab environment with partial functionality in Octave. The convenient visual interface and the detailed manuals are provided. The main benefit of the package is its capability to construct models of any level of complexity in a block-by-block manner. Elementary model blocks can be...
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  • 19

    sequoia-dap

    SEQUOIA ocean data assimilation platform (a SIROCCO suite tool)

    ***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** ***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** ***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** Within the SIROCCO suite of numerical tools, the purpose of SDAP is to provide a flexible platform to carry out multivariate assimilation of geophysical data in a numerical model. The program is multi-grid (finite differences or finite...
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  • 20
    JRC QSAR Model Database

    JRC QSAR Model Database

    (Q)SAR Model Reporting Format Inventory

    In the regulatory assessment of chemicals (e.g. under REACH), Quantitative Structure Activity Models (QSAR) are playing an increasingly important role in predicting properties for hazard and risk assessment. This implies both a need to be able to identify relevant QSARs and to use them to derive estimates and/or have access to their precalculated estimates. To help meet these needs, the JRC QSAR Model Database is established and freely accessible through http://qsardb.jrc.ec.europa.eu/qmrf...
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  • 21

    timetools (for r-cran)

    Seasonal/Sequential (Instants/Durations, Even or not) Time Series

    Objects to manipulate sequential and seasonal time series. Sequential time series based on time instants and time durations are handled. Both can be regularly or unevenly spaced (overlapping durations are allowed). Only POSIX* format are used for dates and times. The following classes are provided : POSIXcti, POSIXctp, TimeIntervalDataFrame, TimeInstantDataFrame, SubtimeDataFrame ; methods to switch from a class to another and to modify the time support of series (hourly time...
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  • 22

    Fosite - advection problem solver

    numerical simulation code for solving transport equations in 1D/2D/3D

    Fosite is a generic framework for the numerical solution of hyperbolic conservation laws in generalized orthogonal coordinates. Its main purpose is the simulation of compressible flows in accretion disks. The underlying numerical solution method belongs to the family of unsplit conservative finite volume TVD schemes. The method is 2nd order accurate in space and uses high order Runge-Kutta and multistep schemes for time evolution. In addition to the pure advection code several source terms...
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  • 23
    Resolver

    Resolver

    A general purpose high precision conversion utility for Java

    This is a Java port of my C++ conversion utility from Geodesica-SFX. Currently only Lengths and Areas are implemented. User can enter fractional or decimal values and set the number of divisions for the following...
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  • 24
    PlateEditor

    PlateEditor

    PlateEditor, a free web application to work with multi-well plates

    PlateEditor is a free web application to work with multi-well plates, from creation of layouts to data visualization and aggregation. It is primarily designed as a tool to help scientists working in the field of biology to simplify and fasten the process of data analysis. It is fully client-side: files are never transferred to the server, ensuring complete security and privacy of research data. It doesn't require any installation. - PlateEditor is available at this...
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  • 25
    glslmath

    glslmath

    C++ header-only library that simulates GLSL math

    GLSLmath provides C++ math operations as defined by GLSL. For example, it provides methods to easily setup viewing transformations and perspective projections. GLSLmath has been inspired by the glm and slmath libraries, which aim to mimic GLSL, but in contrast to those GLSLmath does not focus on a complete conforming implementation of GLSL. It rather aims to provide a convenient single header file that implements the most commonly used subset of GLSL so that it is easy to use for rapid...
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