Search Results for "linux programs" - Page 3
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Showing 417 open source projects for "linux programs"
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
OpenVigil provides a webinterface to analyse pharmacovigilance data, i.e., spontanous or systematic collections of treatments (drugs) and observed adverse events ("drug side effects"). FDA Adverse Event Reporting System (AERS) and other pharmacovigilance data (e.g., Canadian or German) are supported. The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting... -
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TheoDORE
Theoretical Density, Orbital Relaxation and Exciton analysis
The TheoDORE (Theoretical Density, Orbital Relaxation and Exciton analysis) package is a general purpose program suite for the analysis of excited states obtained from quantum chemical excited state calculations. Wavefunction analysis is based on state and transition density matrices, which provides a unified formalism applicable independent of the wavefunction model. TheoDORE is interfaced to a number of quantum chemical programs (Q-Chem, Columbus, Turbomole, ...) and can be used for... -
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PUPIL (Program for User Package Interface and Linking), is a software environment that allows developers to link quickly and efficiently together multiple pieces of software in a fully automated multi-scale simulation. More specifically, it supports QM/MM MD simulations where the user might choose among any of the different MD engines and QM engines, which are connected to PUPIL as external programs through a tiny specific interface. One of the main advantages here is that the user can use...
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AOFlagger
RFI detector and quality analysis for astronomical radio observations
The AOFlagger is a tool that can find and remove radio-frequency interference (RFI) in radio astronomical observations. The code has been highly optimized for speed and accuracy. It is used by default for the LOFAR radio telescope and thus is in productional stage. The software can run in a fully automated way, but a graphical interface is provided to analyse results and tweak the strategy. The preferred input file format is the Casa Measurement Set (MS) format. I believe that the... -
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XDraft is a mechanical drawing editor similar to XFig or various Windoze cad programs, but geared towards more precise drawing. XDraft adds input constraints and other features that makes it highly suitable for power users. Also includes dimensioning.
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Automatic Drawing Generation
A canvas library for generating technical drawings
The ADG library (Automatic Drawing Generation) is a set of functions focused on automating the drawing of mechanical parts. It is not a CAD system but a GObject-based library where a custom application can put common CAD entities such as paths, hatches and dimensions, to automatically create technical drawings. A demo application is provided in order to show the capabilities of the canvas. Although it is possible to interact with the library directly in C (that is what the adg-demo... -
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misc genomics tools
Various scripts used in sequencing, annotation and RNAseq analysis
This is a collection of various programs developed in the course of a genomics project, involving the Pseudomonas strain NCIMB10586 These include * identifying and correcting errors in an (eg) pacbio genome sequence using illumina reads * prokaryotic sequence/genome annotation * RNAseq analysis - normalisation and collation of multiple samples as a group * RNAseq visualisation All scripts are provided on a 'best efforts' basis, however due to various system changes I do not... -
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Curv
A language for making art using mathematics
Curv is a programming language for creating art using mathematics. It's a 2D and 3D geometric modelling tool that supports full colour, animation and 3D printing. Curv is a simple, powerful, dynamically typed, pure functional programming language. Curv is easy to use for beginners. It has a standard library of predefined geometric shapes, plus operators for transforming and combining shapes. These can be plugged together like Lego to make 2D and 3D models. Coloured shapes are represented... -
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3Depict
atom probe software : visualisation and data analysis
This software is designed to help users visualize and analyze 3D point clouds with an associated real value, in a fast and flexible fashion. The primary use is in Atom Probe Tomography, which is an atomic imaging technique. However the program may also be useful in other areas, such as geospatial data, lidar, etc. -
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Quan is designed to model physical quantities in C++ programs. Advantages include automated dimensional analysis checking, automatic unit conversions, self documentation of code.
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Astronomy Linux 21.04
This is an open project "Astronomy Linux 21.04" for amateurs
This is an open project "Astronomy Linux" for amateurs. Free distributive designed for astronomy amateurs. This image contains different astronomical programs, for example: planetariums, image processing, astro-hardware control, INDI drivers, etc. ********************************************************************************** WARNING! You can install and use this distribution without any guarantees. -
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kAtomics
Geometric kernel for CAD programs using an atomic approach
This kernel uses a discrete approach where the geometry is split into "atoms" at a fixed resolution (e.g. 1µm). The aim is to make full use of the parallel processing capabilities of modern graphics hardware. -
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QccPack provides an open-source collection of library routines and utility programs for quantization, compression, and coding of data.
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Astronomy Linux 19.04
This is an open project "Astronomy Linux 19.04" for amateurs
This is an open project "Astronomy Linux" for amateurs. Free Live DVD distributive designed for astronomy amateurs. This DVD contains different astronomical programs, for example: planetariums, image processing, astro-hardware control, INDI drivers, etc. ********************************************************************************** WARNING! You can install and use this distribution without any guarantees. -
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queXC
Web based system for cleaning and classifying open text fields
An Open Source, web based data cleaning and coding system. queXC takes a data file (such as questionnaire data) and cleans the text input fields by spacing and spell checking them. Operators then code text fields using new/existing coding schemes. -
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APTOS is an open source Apt translator project. It consists of several CAM applications, based on the Apt programming language. It is used to create control programs for cnc mills, lathes, water jets, lasers, and other industrial equipment.
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OpenFrames
Real-time interactive 3D graphics API for scientific simulations
OpenFrames has moved its primary development repository to GitHub! Everything else will follow. Get it at https://github.com/ravidavi/OpenFrames/wiki OpenFrames is an Application Programming Interface (API) that allows developers to provides the ability to add interactive 3D graphics to any scientific simulation. A simulation developer can use OpenFrames to specify what they want to visualize, without having to know any details of computer graphics programming. OpenFrames is currently... -
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Pain2D are programs which were developed for the automated pain drawing collection and classification of diseases on the basis of pain drawings in pen-and-paper and digital form for research purposes. Pain2D is currently not a diagnostic tool, but is aimed at scientists, physicians and anyone interested in the automated analysis of pain drawings.
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EduMIPS64 (aka edumips) is a cross-platform MIPS 64 ISA simulator. It can be used to run and debug MIPS programs that are written using the MIPS64 instruction set. It supports visual debugging and lets you see what instructions do in the pipeline.
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Antimony
Antimony is a human-readable, human-writable model definition language
Antimony is a human-readable, human-writable model definition language. libAntimony is a library that will read and write Antimony and SBML files and provides an API for other programs to import Antimony models into their own internal formats. -
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Jack LIRE (Linked Record)
Quantum universal object system with referencing and genetics
Jack LIRE (Linked Record) is a quantum database-backed life-long text record diary with referencing (linking) between records, and a data library for life-long keeping of files such as documents, photographs, music and more. The diary records are fully searchable. Files can be mentioned in diary records to preserve memories, document knowledge and ideas, and more. Massive numbers of diary records and files can be permanently kept. A database located on one computer can be accessed from... -
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smib is one of the smallest and simplest computer algebra system in the world, but simple does not mean simplistic. Using smib you can explore many branches of mathematics (e.g. number theory, algebra, calculus, numerical analysis, differential geometry, probability and stochastic calculus) and also some physics (e.g. electromagnetism and quantum mechanics).. By simple you can understand easy to program (smib is a dynamically typed language, with strong affinity to recursivity, programs...
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OSDLab
Open Source Digital Laboratory
Open Source Digital Laboratory compatible with Arduino project. This software consists from C++/Qt programs such as dotScope (https://dotscope.sourceforge.io) - is a scientific shell for live experiment, dlCAM (https://dlcam.sourceforge.io) - computer aided manufacture for Arduino and others projects, img-map (https://img-map.sourceforge.io) - image digitaizer. -
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ClassicLadder
Free ladder & sequential (grafcet) languages used on automation PLC
Free ladder & sequential (grafcet) languages as used on many PLC for programming automation process. Ladder language allows to realize programs on PLC in an electric way. GTK graphical interface to edit/simulate. Modbus protocol for SCADA connexion and remote Inputs/Outputs modules. Logs events available. Can run on embedded targets for real usages (without GTK interface), as Arietta, RaspberryPi, ... Xenomai support for real-time. -
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64-bit prime test
Test 64-bit integers for pribality. Miller-Rabin, Lucas. BPSW
The code here tests 64-bit integers for primality. For 32-bit values it uses hashing and then a single Miller-Rabin test. As values get larger it uses up to two more Miller Rabin rounds, and at the end it uses BPSW (which is one rould of Miller Rabin and then one of Lucas). Compared to other codes that achieve the same I believe that the hash tables used here are compact, and both the programs and the intermediate data used to create them are provided. This may be of interest just to people...
