Search Results for "code source ping" - Page 21
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Showing 1248 open source projects for "code source ping"
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FSMDesigner is a C++ based implementation for a Finite State Machine (FSM) design tool with integrated Hardware Description Language (HDL) generation. FSMDesigner4 uses the Simple-Moore FSM model guaranteeing efficient fast complex control circuits.
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rarFit
Maximum Likelihood fitting programme using ROOT and RooFit
A maximum likelihood fitting package based on ROOT/RooFit for HEP. The fitting is driven by a text file and includes the following main options: 1) fitting, plotting and extraction of PDFs; 2) fitting of maximum likelihood models; 3) creation of projection and sPlot plots; 4) scanning about maximum likelihood minima; 5) combination of maximum likelihood curves with systematic errors for extraction of significance and combined errors; 6) toy studies; 7) means and pulls on fitted... -
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OCaml interface to FFTW3 -- the Fastest Fourier Transform in the West! (http://www.fftw.org/). The code is developed at https://github.com/Chris00/fftw-ocaml
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parSRA
Portable Framework for the Parallel Execution of Short Read Aligners
...It uses the following techniques in order to improve scalability: 1) a fast splitting of the input reads using the FUSE kernel module available in most of current Linux distributions; 2) a balanced on-demand distribution of the reads based on the shared locks of UPC++, an extension of C++ for parallel computing that follows the Partitioned Global Address Space (PGAS) paradigm. parSRA is portable as its configuration file allows the users to parallelize the execution of existing SRA tools without the need to modify the source code of parSRA or the aligner. -
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Ichnaea
Performance Timing Tools
Ichnaea is a set of tools that aid in collecting and tracking parameters and timings for parallel applications. The Performance Modelling Timing Module, PMTM, is a library that wraps system timing calls to abstract these from code developers and aid portability. It also has functionality to store parameters and print those, along with the timing information to a comma separated variable file. The Performance Modelling Analysis Tool, PMAT, is coming soon. This is able to read in and... -
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MOEA Framework
A Free and Open Source Java Framework for Multiobjective Optimization
The MOEA Framework is a free and open source Java library for developing and experimenting with multiobjective evolutionary algorithms (MOEAs) and other general-purpose multiobjective optimization algorithms. The MOEA Framework supports genetic algorithms, differential evolution, particle swarm optimization, genetic programming, grammatical evolution, and more. A number of algorithms are provided out-of-the-box, including NSGA-II, NSGA-III, ε-MOEA, GDE3 and MOEA/D. In addition, the MOEA... -
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PyCancerDB
Cancer Proteomics Database display and management
PyCancerDB is a source code distribution providing a Web-based interface for browsing and updating the Cancer Proteomics Database, together with scripts for maintaining the database. -
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xorlisp
Bit level lambda continuations and nothing else - Queue automata
Not working yet. To deal with the Halting Problem, computing and data are navigated using debugger ops: linearForward and treeForward, which navigate an astronomically large bit string where 1 is ( and 0 is ). All pairs are derived from (). For example, true is represented as ((()())()), and false is (()(()())). It appears related to the church encoding of lambda where T chooses first parameter and F chooses second, of a pair. Continuations are nearly finished code and are represented as a... -
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SCRalyze
A matlab environment for model-based psychophysiology
SCRalyze is a powerful tool for model-based analysis of psychophysiological signals, using linear convolution models and dynamic causal modelling. A flexible import interface and many utilities make this software a standalone tool. IMPORTANT: As of 04.11.2019, the official code repository for PsPM (formerly SCRalyze) has been moved to https://github.com/bachlab/PsPM . In order to check the latest releases, discussion and bug reports, please refer to our new repository. Although this... -
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MD PnP | OpenICE
Open Source Integrated Clinical Environment
As of 2015-06-23, this project may now be found at http://www.github.com/mdpnp/mdpnp. A prototype reference implementation of the standard for the Integrated Clinical Environment (ASTM F2761-2009) -
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rochePlot
Schematically plot the evolution of binary stars
RochePlot is a Fortran code using PGPlot to plot a series of binaries to illustrate the key stages in the evolution of a binary star -
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ParsNIP
Parser for PTRAC files produced by MCNP
ParsNIP takes the ascii PTRAC files produced with MCNP radiation transport code and parses into a one-line = one-event format which can then be further processed in MATLAB, Excel etc. if necessary. -
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QG fantasy maps plugins
Some pythons plugins to enhance fantasy maps creation with QGis
QGis permit the use of python script to handle maps. Here are some python code ready to use and modify, and some associated samples. -
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Moved to GitHub. This is the old, unmaintained source code. https://github.com/zet-evacuation A tool to model and simulate evacuation situations in buildings using flows on graphs and cellular automatons. It allows visualization of both models in OpenGL.
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ANT.Gaussian
Quantum transport code based on Gaussian03/09
Atomistic NanoTransport (ANT) comprises a series of codes designed to compute electronic quantum transport with a broad range of applicability in nanoelectronics. ANT.Gaussian (or ANT.G for brevity) relies on the popular quantum chemistry code GAUSSIAN03/09 code with which interfaces in a seamless manner. Straightforwad use of ANT.G include the computation of the zero-bias conductance (or, alternatively, the electrical current under an applied bias voltage) of a variety of nanoscale systems... -
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Open Postcode
Geolocation Postcode Algorithm
A geolocation code for Ireland and elsewhere. Fully extensible. Encoding coordinates into single base-25 characters. -
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RANGE: produce random genetic transcription networks in the NEMO language, which when compiled outputs models in Systems Biology Markup Language. Generate synthetic microarray data, or use NEMO alone to SBML-ize a network, or visualize it in cytoscape.
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Virus QSP Modeling
C++ and Python code for simulating RNA virus replication
Stochastic simulation model of poliovirus Sabin-to-Mahoney genetic state transition (C++ code). Models genotypes, virus populations, and quasispecies cloud. Simulates replication error and copy-choice recombination. Various parameters guiding the model are user-specified. Python code post-processes simulation output to produce report files. -
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JPOP is a pure java parallel optimization package based on the Optimization Java Package. It supports analytical gradients and Hessians for non-linear optimization. JPOP is based on uncmin in Fortran but employs java arrays and object oriented code.
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DEAPathways
Differential Expression Analysis for Pathways
This project contains the source code associated with the PLoS Computational Biology publication: "Differential Expression Analysis for Pathways". The paper text can be found here: http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002967 -
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CUDAlign
CUDAlign is a tool that aligns huge DNA sequences in CUDA capable GPUs
...IPDPS 2011: 1199-1211 [3] Edans Sandes, Alba Melo. CUDAlign: using GPU to accelerate the comparison of megabase genomic sequences. PPOPP 2010: 137-146 The latest source code can be found in Github. See the MASA project at https://github.com/edanssandes/MASA-CUDAlign -
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vHDL Obfuscator GUI
vHDL Obfuscator is an small GUI to obfuscate and reformat HDL files
VHDL and Verilog HDL are standards languages for hardware description. Sometimes is necessary to share the source HDL file but maintaining a little level of control and protection of the intellectual property. This tool generate obfuscated code that is almost unreadable to humans, but is still readable to compilers and simulators. This tool use GHDL (https://sourceforge.net/projects/ghdl-updates/), HDLObf (https://sourceforge.net/projects/hdlobf/), Icarus Verilog (https://sourceforge.net/projects/iverilog/) and was created in Lazarus (http://www.lazarus-ide.org/) -
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ApproxAdderLib
Library of Approximate Adders
We provide MATLAB and Verilog Models of GeAr, and previously proposed adders (ACA-I, ETAII, ACA-II and GDA) at http://sourceforge.net/projects/approxadderlib/ GeAr is a low latency Generic Accuracy Configurable Adder that provides a higher number of potential configurations compared to state-of-the-art approximate adders, thus enabling a high degree of flexibility and trade-off between performance and output quality. These MATALB and Verilog models can allow software programmer as well as hardware designers to evaluate their code and design. To the best of our knowledge, this is the first open-source library of approximate adders that facilitates reproducible comparisons and further research and development in this direction across various layers of design abstraction. This work is a result of collaborative effort between Chair for Embedded Systems (CES) at Karlsruhe Institute of Technology (KIT), Germany and Vision Image and Signal Processing (VISpro) Lab at SEECS-NUST, Pakistan. -
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