Showing 132 open source projects for "source cross reference"

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  • 1
    GeoServer

    GeoServer

    GeoServer repository

    GeoServer is an open-source software server written in Java that allows users to share and edit geospatial data. Designed for interoperability, it publishes data from any major spatial data source using open standards. Being a community-driven project, GeoServer is developed, tested, and supported by a diverse group of individuals and organizations from around the world.
    Downloads: 9 This Week
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  • 2
    Elasticsearch

    Elasticsearch

    A Distributed RESTful Search Engine

    Elasticsearch is a distributed, RESTful search and analytics engine that lets you store, search and analyze with ease at scale. It lets you perform and combine many types of searches; it scales seamlessly, and offers answers incredibly fast with search results you can rank based on a variety of factors. Elasticsearch can be used for a wide variety of use cases, from maps and metrics to site search and workplace search, and with all data types.
    Downloads: 11 This Week
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  • 3
    CERCA

    CERCA

    CERCA – Citation Extraction & Reference Checking Assistant

    CERCA is an open-source research tool that supports the verification of bibliographic references in scientific manuscripts. It extracts references from PDF files and checks their existence and consistency against authoritative metadata sources, producing explainable diagnostics, audit logs, and reproducible reports. It is intended for: - Researchers performing final manuscript checks - Reviewers assessing reference consistency - Editors supporting editorial quality control - Meta-research and reproducibility workflows CERCA is an experimental tool. ...
    Downloads: 54 This Week
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  • 4
    OnScreenProtractor

    OnScreenProtractor

    Simple on-screen protractror.

    On-Screen Protractor is a simple java application that allows to measure an angle on the screen. Originally the program was conceived to assess the angle between north and a given point on any map open on the screen, therefore the background of the application window is transparent and the angle is measured from the positive y-axis and clockwise. The application allows to move the origin of reference axes and to rotate the axes as needed. OnScreenProtractor works correctly only in...
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    Downloads: 115 This Week
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  • 5

    detectproj

    Automated detection of the unknown early map projection

    New scientific software supporting the automated detection of the early map projection and its parameters. Useful for studying and analysis of different kinds of maps with the lack of information about the map projection. The analysis is based on the minimization of residuals between control points on the early and current reference maps. Designed for cartographers as well as for enthusiasts. Available free of charge. The awareness of the map projection is primarily important...
    Downloads: 87 This Week
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  • 6
    NGSEP

    NGSEP

    NGSEP (Next Generation Sequencing Experience Platform)

    NGSEP is an integrated framework for analysis of short and long DNA high throughput sequencing reads. The current version provides functionalities for both de-novo and reference guided analysis of sequencing data, including genome assembly, read mapping, variants detection and genotyping and de-novo analysis of data generated from reduced representation protocols. NGSEP also provides modules for analysis of genomic variation databases (VCF files), including functional annotation, filtering,...
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    Downloads: 15 This Week
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  • 7
    Open Beam Profiler

    Open Beam Profiler

    Profiling and analysis of laser beams with ImageJ

    This open-source software enables profiling and analysis of laser beams. It can be used with a variety of cameras supported by ImageJ and Micro-Manager, or images from any other source. It provides all common analysis methods like D4Sigma, knife-edge, as well as fitting of Hermite-Gauss, Laguerre-Gauss and super-Gauss functions.
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    Downloads: 30 This Week
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  • 8
    In addition to computing co-expression clusters, Maccu fishes potential co-expressed genes for a given bait set. All results can be further processed via graph-level operations so that we can compare graphs based on different reference data.
    Downloads: 0 This Week
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  • 9
    Grassroots DICOM

    Grassroots DICOM

    Cross-platform DICOM implementation

    Grassroots DiCoM is a C++ library for DICOM medical files. It is accessible from Python, C#, Java and PHP. It supports RAW, JPEG, JPEG 2000, JPEG-LS, RLE and deflated transfer syntax. It comes with a super fast scanner implementation to quickly scan hundreds of DICOM files. It supports SCU network operations (C-ECHO, C-FIND, C-STORE, C-MOVE). PS 3.3 & 3.6 are distributed as XML files. It also provides PS 3.15 certificates and password based mecanism to anonymize and de-identify DICOM datasets.
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    Downloads: 101 This Week
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  • 10
    BRL-CAD

    BRL-CAD

    Open Source Solid Modeling CAD

    BRL-CAD is a powerful cross-platform constructive solid geometry solid modeling system that includes an interactive geometry editor, ray-tracing for rendering & geometric analyses, network distributed framebuffer support, image & signal-processing tools.
    Downloads: 60 This Week
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  • 11
    A series of open source files and programs available to use for developing programs to work with the WowWee Robotics RSMedia Robot. These include a USB serial console, a cross-compiler, a firmware dump program, text-to-speech and source code.
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    Downloads: 7 This Week
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  • 12
    123FASTQ

    123FASTQ

    An intuitive and efficient tool for preprocessing Illumina FASTQ reads

    123FASTQ performs all the pre-processes of Illumina next-generation sequencing reads (FASTQ files) easier than ever.  Download the quick user manual for the latest version: https://dl.adbioinformatics.net/NGSNeeds/myTools/123Fastq_v1.3_Manual.pdf Authors: Milad Eidi, Samaneh Abdolalizadeh, Mohammad Hossein Nassirpour Supervisors: Javad Zahiri, PhD University of California San Diego  Masoud Garshasbi, PhD Tarbiat Modares University, Tehran, Iran If you use 123FASTQ,...
    Downloads: 5 This Week
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  • 13
    JDiskMark

    JDiskMark

    Java Disk Benchmark Utility

    JDiskMark is a powerful and versatile disk benchmarking tool written in Java, designed to help you accurately measure the performance of your storage devices across different operating systems. Whether you're testing HDDs, SSDs, or network drives, JDiskMark provides reliable insights into your disk's read and write speeds. ubuntu/debian installer: https://sourceforge.net/projects/jdiskmark/files/jdiskmark_0.6.3_amd64.deb/download rhel / fedora...
    Downloads: 20 This Week
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  • 14
    Ellogon is a multi-lingual, cross-platform, general-purpose language engineering environment.
    Downloads: 0 This Week
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  • 15
    Open Visual Traceroute

    Open Visual Traceroute

    Open source cross-platform Java Visual Traceroute

    Open source cross-platform (Windows/Linux/Mac) Java Visual Traceroute. Data is displayed in a 3D or a 2D map component. What is a traceroute? http://en.wikipedia.org/wiki/Traceroute If you need some help, please first check http://visualtraceroute.net/ Feel free to drop by and leave a comment on the Facebook page https://www.facebook.com/openvisualtraceroute Enjoy and share!
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    Downloads: 735 This Week
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  • 16
    The RDP Classifier is a naive Bayesian classifier that can rapidly and accurately provides taxonomic assignments for bacterial and archaeal 16S rRNA sequences, fungal LSU and fungal ITS sequences, with confidence estimates for each assignment. More information and tutorials on how to install, use and retrain RDP Clasifier can be found on at https://github.com/rdpstaff/classifier and John Quensen's blog (https://john-quensen.com/). Citation: 1. Wang Q, Garrity GM, Tiedje JM, Cole JR....
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    Downloads: 47 This Week
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  • 17
    TXM

    TXM

    Unicode XML TEI text analysis platform

    TXM is a free and open-source cross-platform Unicode & XML based text analysis environment and graphical client, supporting Windows, Linux and Mac OS X. It can also be used online as a J2EE standard compliant web portal (GWT based) with access control built in. DOWNLOAD LATEST VERSION OF TXM : http://textometrie.ens-lyon.fr/spip.php?rubrique61&lang=en TXM offers a comprehensive range of analysis tools (concordances, collocate search, frequency lists, etc.) based on the powerfull CQP full text search engine (http://cwb.sourceforge.net) and a range of statistical functions (factorial analysis, classification, cooccurrency analysis, etc.) based on R packages (http://www.r-project.org). ...
    Downloads: 11 This Week
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  • 18
    xRxTx - Uart/Com

    xRxTx - Uart/Com

    Rxtx/Uart GUI

    RxtxConsole is an API and GUI software, developed by Doidx with JSerialCom as the kernel. It can be used for multi- UART/RS232 interface operation. The platform supports Windows/MAC/Linux. Note: Developed with Java17 Follow these steps step by step to apply RxtxConsole, 1. LIST, to obtain all Serial ports currently available on the system. 2. CONNECT, Select a Serial port for connection and place it in the connection pool for use ...
    Downloads: 6 This Week
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  • 19
    xSMBus - Java I2C/SMBus API

    xSMBus - Java I2C/SMBus API

    USB Bridge for SMBus(I2C), GPIO, and Clock, Java API

    [Introduction] xSmbus-m01 is not only a Java API, but also a program that can be executed separately. The following are its function options: Need to be executed at the command prompt, java -jar /YourPath/xSmbus-m01-1.0p.jar Help - list the parameter table Verification - verify that the product is working properly Test - used for system maintenance, in advance Check - determine if there is a device on the I2C location Scan - search in the range of 00-FF, search out on the I2C bus...
    Downloads: 0 This Week
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  • 20
    EduMIPS64
    EduMIPS64 (aka edumips) is a cross-platform MIPS 64 ISA simulator. It can be used to run and debug MIPS programs that are written using the MIPS64 instruction set. It supports visual debugging and lets you see what instructions do in the pipeline.
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    Downloads: 7 This Week
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  • 21
    Jacksum

    Jacksum

    a free cross platform checksum utility, supports 58+ hash algorithms

    Development of this project has been moved to https://github.com/jonelo/jacksum. This site has been left for historical purposes ONLY, you find older Jacksum versions here. Please visit the GitHub site for current development. Jacksum 1.7.0 is a platform independent checksum utility (written entirely in Java) for computing and verifying (integrity check) checksums, CRC and hashes (fingerprints). It supports 58 popular hash algorithms and a lot of unique features.
    Downloads: 3 This Week
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  • 22
    NumericalChameleon

    NumericalChameleon

    a free cross platform precise unit converter, supports 6000+ units

    The NumericalChameleon is a free, open source, cross platform software in order to convert units. It converts numbers with a precision of up to 1000 significant figures. It supports more than 6000 units in 94 categories. It has been localized in 10 languages.
    Downloads: 3 This Week
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  • 23
    The Video Annotation and Reference System (VARS) is a software interface and database system that provides tools for describing, cataloging, retrieving, and viewing the visual, descriptive, and quantitative data associated with video.
    Downloads: 0 This Week
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  • 24
    Waves FX

    Waves FX

    Advanced 2D simulator for evolving harmonical waves.

    WavesFX is a Java FX application to compute and represent with a very high precision harmonical waves evolving in space and time. The real-time motor is result of many years of investigation about the nature of the time. I decided to implement the philosophical motor in Java because of the cross-platform nature of the language. Some of the "normal" features are XY scalation, manual or mouse-assisted, translation of the XY axes, change of background colors, dynamic range X and...
    Downloads: 0 This Week
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  • 25
    OpenATPOL

    OpenATPOL

    A reference implementation of the Polish geobotanical grid

    This project is a reference, open source implementation of the coordinate conversion algorithms for the Polish geobotanical grid called ATPOL.
    Downloads: 1 This Week
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