A quality control analysis tool for high throughput sequencing data
BBMap short read aligner, and other bioinformatic tools.
City of Hope CpG Island Analysis Pipeline
Hadoop spliced read aligner for RNA-seq data
Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller
Fast and more random implementations of java.util.Random.
Identification of chromatin accessibility from NOMe-seq
Integrated pipeline for HT miRNA-Seq data analysis
Analyze time-course data with significance tests, clustering, modeling
Software for analysis of afSELEX-seq data
A sequence analysis tool for normal/tumor DNA and RNA data.