Showing 28 open source projects for "python file format interface"

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  • 1
    Jmol

    Jmol

    An interactive viewer for three-dimensional chemical structures.

    Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other...
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    Downloads: 1,185 This Week
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  • 2
    OpenJUMP (The JUMP Pilot Project)
    OpenJUMP is a community driven fork of JUMP the "Java Unified Mapping Platform" GIS software. The original JUMP was developed by Vivid Solutions, released under GPL2 in 2003 and discontinued in 2006. During 2004 already some enthusiastic developers joined together to enhance further the features of JUMP. They launched an independent development branch called OpenJUMP. The name gives credit to the original JUMP development, and at the same time describes the objectives of this project to...
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    Downloads: 163 This Week
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  • 3
    Advanced Trigonometry Calculator

    Advanced Trigonometry Calculator

    Precision Trigonometry: Advanced Calculator for Complex Math

    Advanced Trigonometry Calculator is equipped with a user-friendly interface that allows for easy input of problems and instant computation. Professionals such as engineers who need to perform advanced trigonometric calculations in their work will find this tool extremely useful. More info by clicking below: https://advantrigoncalc.sourceforge.io/ Advanced Trigonometry Calculator was only and always only developed by the Portuguese Renato Alexandre dos Santos Freitas. Also author...
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    Downloads: 20 This Week
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  • 4
    Autoplot

    Autoplot

    Autoplot is an interactive browser for data on the web

    Autoplot is an interactive browser for data on the web. Give Autoplot a URL or local file name and it creates a sensible plot of the data. Autoplot allows you to interactively browse data stored in ascii, .cdf, netcdf, and many other formats. Autoplot's source has been moved to GitHub. Thanks to SourceForge for many years of hosting!
    Downloads: 4 This Week
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  • 5
    miRDeep*

    miRDeep*

    MiRDeep*

    Please cite: An, J., Lai, J., Lehman, M.L. and Nelson, C.C. (2013) miRDeep*: an integrated application tool for miRNA identification from RNA sequencing data. Nucleic Acids Res, 41, 727-737. We will create index for you if you tell us your interested species (j.an@qut.edu.au). download command line version "MDS_command_line_Vxx.zip" clicking "Browse All Files" please find miRPlant in sourceforge for plant miRNA prediction.
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    Downloads: 1 This Week
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  • 6

    Ignition tag generator

    Generate tags for Ignition 8.1.X

    This tool is a lightweight Java-based generator that creates JSON files with a hierarchical Folder/UDT/Tag structure. It’s designed to help you quickly populate your Ignition tag system by pre-defining common tag properties. With an easy-to-use Swing interface, you can build and manage your tag hierarchy, then export it as a ready-to-import JSON file. Requires Java 8 or later. Make sure JAVA_HOME or PATH includes your Java directory. No affiliation with Ignition/I.A.
    Downloads: 0 This Week
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  • 7
    JQM Java Quine McCluskey

    JQM Java Quine McCluskey

    JQM - Java Quine McCluskey for minimization of Boolean functions.

    Java Quine McCluskey implements the Quine McCluskey algorithm with Petrick’s Method (or the method of prime implicants) for minimization of Boolean functions. This software can be used both for learning and solving real problems. As a learning/teaching tool, it presents not only the results but also how the problem was solved as well as how to use Karnaugh Maps to solve the problem. Up to sixteen functions of sixteen variables can be minimized. A graphical interface is provided for entering...
    Downloads: 2 This Week
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  • 8
    Open Source Data Quality and Profiling

    Open Source Data Quality and Profiling

    World's first open source data quality & data preparation project

    This project is dedicated to open source data quality and data preparation solutions. Data Quality includes profiling, filtering, governance, similarity check, data enrichment alteration, real time alerting, basket analysis, bubble chart Warehouse validation, single customer view etc. defined by Strategy. This tool is developing high performance integrated data management platform which will seamlessly do Data Integration, Data Profiling, Data Quality, Data Preparation, Dummy Data...
    Downloads: 3 This Week
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  • 9
    dsam
    The Development System for Auditory Modelling (DSAM) is a computational library designed specifically for producing simulations of the auditory system. It brings together many established auditory models within a flexible programming platform.
    Downloads: 0 This Week
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  • 10
    ebfformat

    ebfformat

    An Efficient Binary data Format

    EBF, which stands for Efficient Binary Format, is a binary file format for reading and writing binary data easily. Reading writing routines are currently available in C,C++,Fortran,Java, Python, IDL, MATLAB. A program called ebftkpy which has a set of utility functions to work with the .ebf files , e.g., viewing the contents and getting a summary, is also provided. The EBF specification is designed to be concise and easy to understand to make it easier for others to write their own code...
    Downloads: 0 This Week
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  • 11
    Crystalsim -  XRD hkl simulation

    Crystalsim - XRD hkl simulation

    X-ray diffraction (XRD) analysis for hkl simulation of any crystal.

    Crystalsim is a simple freeware program with a neat graphical user interface for X-ray diffraction (XRD) data analysis . It can simulates all possible {hkl} planes data for the selected crystal. Crystallographic Information File (.cif) can also be used. Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta, gamma...
    Downloads: 12 This Week
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  • 12
    NOVA

    NOVA

    Analysis and visualization of complexome profiling data.

    ..., image export, and automatic file format recognition support intuitive handling for biologists. Giese, et al. NOVA: a software to analyze complexome profiling data. Bioinformatics, 2015, 31(3): 440-441
    Downloads: 1 This Week
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  • 13
    HermeneutiX

    HermeneutiX

    Your graphical tool for Syntactic/Semantic Structure Analysis of texts

    HermeneutiX is a tool for diagramming syntactic and semantic structures of complex (not necessarily foreign-language) texts (e.g. bible or other historical excerpts). HermeneutiX is now part of SciToS (the scientific tool set). Starting with version 2.0.0, HermeneutiX can be found on GitHub. Please check out the release summary: https://github.com/scientific-tool-set/scitos/releases For an introduction, check out this video: https://youtu.be/uQjewyG0Ad8 PS: To run a Java...
    Downloads: 10 This Week
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  • 14
    Visualization of Protein-Ligand Graphs

    Visualization of Protein-Ligand Graphs

    Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools

    NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/
    Downloads: 0 This Week
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  • 15
    Twitter Research Data Collector
    It gives facility of collecting tweets through Twitter Streaming API w.r.t different search criteria and to save tweets in CSV and ARFF (WEKA) file formats.
    Downloads: 0 This Week
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  • 16
    GEDI: Groundtruthing Editor
    GEDI (Groundtruthing Environment for Document Images) is a highly configurable document image annotation tool. Its basic structure involves two types of files, an Image file, and a corresponding .XML file in GEDI format. LAMP Univ of MD, College Park, MD
    Downloads: 0 This Week
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  • 17
    Easy Equations

    Easy Equations

    Hand Written Equation Creator

    Easy Equations is a utility using which one can write the mathematical equations. The focus of this utility is to provide user friendly access to write mathematical equations which is helpful for students, lecturers, mathematicians and Research persons who prefer using mathematical equations in a document, PowerPoint or web sites. Works on Windows as well as Linux platforms. Software Requirements: JDK 7 or higher. Linux Platform with kernel version 2.7 or higher.(for Linux users).python...
    Downloads: 0 This Week
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  • 18
    Smartphone IMU GPS

    Smartphone IMU GPS

    An Android App Dealing with Smartphone Sensors

    ... GPS-Algorithms running in the Background which transform the GPS data in different coordinate frames. The Stream via WLAN uses the User Datagram Protocol (UDP) Interface. In order to receive the data you can use something like the Java File "QuoteClient"in the Files-Section.
    Downloads: 0 This Week
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  • 19
    ipmems

    ipmems

    Real-time data acquisition and visualization software

    Cross-platform data acquisition and visualization software with an embedded HTTP-server, binary protocol parsing library, protocol emulation server, remote secure administration server, embedded Groovy scripting facilities and HMI (SCADA) visualization module.
    Downloads: 0 This Week
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  • 20
    Nen

    Nen

    neural network implementation in java

    3-layer neural network for regression and classification with sigmoid activation function and command line interface similar to LibSVM. Quick Start: "java -jar nen.jar"
    Downloads: 0 This Week
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  • 21
    Based on a graph approach this engine is ale to provide splitting of a service activation/update request into multiple device requests. A device request can be considered logging into a telnet server and lunching some commands.
    Downloads: 0 This Week
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  • 22
    A real-time graph plotter. While your application is computing and logging results to a CSV file using the LiveGraph Writer API, the plotter lets you visualise and monitor the results live - by instantly plotting charts and graphs of the data.
    Downloads: 6 This Week
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  • 23
    Java framework for face detection and face recognition based on different plugin and filter types. Includes Eigenfaces in pure Java, OpenCV detection via JNI, integration of the Betaface.com Web Service, skin color filter, Adobe XMP Export and a nice GUI
    Downloads: 0 This Week
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  • 24
    febrl-gen is a Java-based frontend to Febrl, an open-source data linkage system written in Python. Users can configure the parameters of a linkage project through the frontend, and febrl-gen will generate a Febrl-ready configuration file.
    Downloads: 0 This Week
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  • 25
    PileWorks provides the organizational structure for coordinating several different projects which approach some aspect of Pile Technology. PileWorks defines a set of interfaces and implements some basic infrastructure for Pile engines and agents.
    Downloads: 3 This Week
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