Showing 91 open source projects for "p&id"

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  • 1
    HEALPix

    HEALPix

    Data Analysis, Simulations and Visualization on the Sphere

    ...Please acknowledge HEALPix by quoting the web page http://healpix.sourceforge.net (or https://healpix.sourceforge.io) and publication: K.M. Gorski et al., 2005, Ap.J., 622, p.759 Full software documentation available at https://healpix.sourceforge.io/documentation.php Wiki Pages: https://sourceforge.net/p/healpix/wiki/Home Exchanging Data with HEALPix (in FITS files): https://sourceforge.net/p/healpix/wiki/Exchanging%20Data%20with%20HEALPix/ GDL and FL users should read https://sourceforge.net/p/healpix/wiki/HEALPix%20and%20GDL/
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    Downloads: 510 This Week
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  • 2
    UnBBayes

    UnBBayes

    Framework & GUI for Bayes Nets and other probabilistic models.

    ...It supports Bayesian networks, influence diagrams, MSBN, OOBN, HBN, MEBN/PR-OWL, PRM, structure, parameter and incremental learning. Please, visit our wiki (https://sourceforge.net/p/unbbayes/wiki/Home/) for more information. Check out the license section (https://sourceforge.net/p/unbbayes/wiki/License/) for our licensing policy.
    Downloads: 7 This Week
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  • 3
    GeoNetwork opensource - Metadata Catalog
    A web based Metadata Catalog Server for data description and discovery. Supports both generic and geospatial data discovery. It implements international standards (e.g. ISO19115/19139/19119, ISO19115-3, DCAT-AP, CSW 2.0, OGC API Records). It originates from the United Nations and is used by many governments as geoportal software. Active development and discussion takes place on GitHub and OSGeo Discourse. You can also connect directly with the companies supporting the...
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    Downloads: 213 This Week
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  • 4

    JGPSTrackEdit

    GPS track editor for editing tracks and planning (multiple) day tours

    ...To run the software, a java runtime installation is required (may be obtained from https://www.java.com/de/download/ or https://openjdk.java.net/projects/jdk8/ or https://adoptopenjdk.net/) More information, including the user manual, may be found on the wiki pages (https://sourceforge.net/p/jgpst
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    Downloads: 46 This Week
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  • 5
    SPELL

    SPELL

    Satellite Procedure Execution Language and Library

    ...SPELL consists of five integral applications which users can use as a complete software suite or as individual standalone applications. Start!: https://sourceforge.net/p/spell-sat/wiki/Home/
    Downloads: 37 This Week
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  • 6
    Geo Arbores
    Geo Arbores is a project for developing tools and extensions for the GIS software OpenJUMP
    Downloads: 4 This Week
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  • 7

    Biogenesis Color Mod

    Mod for evolution simulation and artificial life program Biogenesis

    ...Original project by Joan Queralt Molina: https://sourceforge.net/projects/biogenesis/ Includes Tyler Colemans "Features Mod": https://sourceforge.net/projects/biogenesisfeatu/ Biogenesis discussion forum: https://sourceforge.net/p/biogenesis/discussion/ Biogenesis runs faster (at least for myself) if you open a Google Chrome window (don´t know why :D)
    Downloads: 0 This Week
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  • 8
    NGSEP

    NGSEP

    NGSEP (Next Generation Sequencing Experience Platform)

    ...Since version 4, we provide functionalities for management of genomes and transcriptomes, including genome alignment and annotation of transposable elements. A complete list of functionalities is available in our wiki (https://sourceforge.net/p/ngsep/wiki/Home/). BEFORE DOWNLOADING: The green button directs to the jar for command line usage. See the wiki for the GUI and other options
    Downloads: 0 This Week
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  • 9
    TVscript

    TVscript

    Exploration of the removal of count variable transcripts.

    > See TVscript wiki: https://sourceforge.net/p/tvscript/wiki/Home/ Related Software: 1. CStone: https://sourceforge.net/projects/cstone/ 2. CSReadGen: https://sourceforge.net/projects/csreadgen/ 3. CView: https://sourceforge.net/projects/cview/ 4. ChimSim: https://sourceforge.net/projects/chimsim/ 5. TVScript: (See wiki) 6. SeQuester: https://sourceforge.net/projects/sequester/ 7.
    Downloads: 0 This Week
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  • 10

    GelJ

    GelJ is a Java program for the analysis of DNA gel fingerprints images

    ...GelJ – a tool for analyzing DNA fingerprint gel images. BMC Bioinformatics 2015, 16:270 http://doi.org/10.1186/s12859-015-0703-0. You can see more information about GelJ in https://sourceforge.net/p/gelj/wiki/Home/ Several videos explaining the use of GelJ are available in https://sourceforge.net/p/gelj/wiki/Videos/ Please address any question or comment to joheras at gmail.com
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    Downloads: 88 This Week
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  • 11
    FCSalyzer

    FCSalyzer

    FCSalyzer is a free program for analysing flow cytometry data

    ...Impressum / Legal Notice Sven Mostböck Wien Austria e-mail: sven_mostboeck@users.sourceforge.net second contact option: use the open discussion on the FCSalyzer sourceforge page: http://sourceforge.net/p/fcsalyzer/discussion/
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    Downloads: 74 This Week
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  • 12
    Wuweido 3D CAD

    Wuweido 3D CAD

    Free 3D Mobile CAD

    Wuweido is a professional 3D CAD on your phone or tablet. More than just a viewer, dozens of modeling tools are provided to create and modify 3D models in the most natural way. Wuweido allows you to import and export models in standard CAD format. Unlike Onshape™ on Cloud, Wuweido is running locally on your device and it's more like Rhino™ 3D on mobile. Wuweido is powered by OPEN CASCADE. OPEN CASCADE is an incredible powerful geometry kernel innovating quickly. Wuweido is inspired by...
    Downloads: 11 This Week
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  • 13
    LoopMatcher

    LoopMatcher

    Find sequence-specific stem-loops in FASTA and GenBank files.

    ...It uses RNAfold to predict sequence structure and UShuffle to generate random sequences with a defined k nucleotide frequency. Also, sequences in GenBank format can be downloaded directly from NCBI using the NCBI access ID. Requirements JAVA Runtime 8. It's highly recommended to have a multicore processor to process large sequences. * Currently, this version only runs in Windows x64.
    Downloads: 0 This Week
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  • 14
    Autshumato MTWS

    Autshumato MTWS

    Autshumato Machine Translation Web Service

    ... - Administration interface to add users, reviewers and MT systems. - Exposed API for all of the services. - Ability to log into the system using your Google or Facebook ID. - All requests are logged by IP. Licensed under the GNU GPL v3 (or later): http://www.gnu.org/licenses/gpl-3.0.txt
    Downloads: 0 This Week
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  • 15

    AntibiogramJ

    AntibiogramJ is a Java program for the reading of antibiogram-images

    ...Computer Methods and Programs in Biomedicine 143:159-169. 2017. DOI: http://dx.doi.org/10.1016/j.cmpb.2017.03.010 You can see more information about AntibiogramJ in https://sourceforge.net/p/antibiogramj/wiki/Home/ Several videos explaining the use of AntibiogramJ are available in https://sourceforge.net/p/antibiogramj/wiki/Videos/ AntibiogramJ includes now the EUCAST v.9.0. Please address any question or comment to joheras at gmail.com
    Downloads: 7 This Week
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  • 16
    seqMINER
    A genome wide mapping data interpretation platform for NGS(ChIPSeq). A tutorial can be found at: http://genomeast.igbmc.fr/wiki/doku.php?id=training:seqminer
    Downloads: 5 This Week
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  • 17
    JLibModbus - Java Modbus Library

    JLibModbus - Java Modbus Library

    A modbus library implemented in Java.

    ...The library supports the most popular communication libraries (jssc, rxtx, jSerialComm, purejavacomm, java comm api); Maven dependency: <dependency> <groupId>com.intelligt.modbus</groupId> <artifactId>jlibmodbus</artifactId> <version>1.2.9.7</version> </dependency> Implemented MODBUS functions: 0x01 Read Coils 0x02 Read Discrete Inputs 0x03 Read Holding Registers 0x04 Read Input Registers 0x05 Write Single Coil 0x06 Write Single Register 0x07 Read Exception Status 0x08 Diagnostics 0x0B Get Comm Event Counter 0x0C Get Comm Event Log 0x0F Write Multiple Coils 0x10 Write Multiple Registers 0x11 Report Slave Id 0x14 Read File Record 0x15 Write File Record 0x16 Mask Write Register 0x17 Read Write Multiple Registers 0x18 Read Fifo Queue 0x2B Encapsulated Interface Transport (Read Device Identification interface)
    Downloads: 11 This Week
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  • 18
    JESUBOTs -  FRC Team #5809

    JESUBOTs - FRC Team #5809

    Rockhurst High School Robotics Team

    ...Our rookie year was 2016 when we were honored to win the Rookie All-Star Award and had the pleasure of attending the FRC World's Competition in St. Louis, Missouri. Note: We're the team with the wooden bow-ties. SVN Project Root: https://svn.code.sf.net/p/rhsfrc/svn/ Mech Team Root: svn+ssh://sfusername@svn.code.sf.net/p/rhsfrc/svn/2017/mech SW Team Root: https://svn.code.sf.net/p/rhsfrc/svn/2017/sw Rockhurst High School, located in Kansas City, Missouri, is a Jesuit Catholic private college preparatory school founded in 1923 for boys grades nine through twelve. http://www.rockhursths.edu
    Downloads: 0 This Week
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  • 19

    JSiteDescriptor

    Binding site descriptor generation for SVM based classification.

    A set of java programs that extract coordinate and chemical information from PDB files. The binding site regions are extracted using grid based scheme. For binding site, spatio-chemical descriptor is generated based on PocketMatch algorithm of Dr. Kalidas (author of this project too).
    Downloads: 1 This Week
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  • 20
    ...This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the wiki: http://sourceforge.net/p/adamajava/wiki/Home/
    Downloads: 0 This Week
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  • 21
    ...Obtaining the teachingbox: FOR USERS: If you want to download the latest releases, please visit: http://search.maven.org/#search|ga|1|teachingbox FOR DEVELOPERS: 1) If you use Apache Maven, just add the following dependency to your pom.xml: <dependency> <groupId>org.sf.teachingbox</groupId> <artifactId>teachingbox-core</artifactId> <version>1.2.3</version> </dependency> 2) If you want to check out the most recent source-code: git clone https://git.code.sf.net/p/teachingbox/core teachingbox-core Documentation: https://sourceforge.net/p/teachingbox/documentation/HEAD/tree/trunk/manual/
    Downloads: 0 This Week
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  • 22
    High-Throughput Tabular Data Processor
    ...HTDP can also import, process and convert Variant Call Format (VCF) files ver. 4.0, 4.1 and 4.2 (http://samtools.github.io/hts-specs/VCFv4.2.pdf). HTDP provides quick filtering functionality and can process data consisting of single or multiple input files. Citation: Madanecki P, Bałut M, Buckley PG, Ochocka JR, Bartoszewski R, Crossman DK, et al. (2018) High-Throughput Tabular Data Processor – Platform independent graphical tool for processing large data sets. PLoS ONE 13(2): e0192858. https://doi.org/10.1371/journal.pone.0192858
    Downloads: 0 This Week
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  • 23
    GNAT

    GNAT

    GNAT recognizes gene names in text and maps them to NCBI Entrez Gene

    ...It will detect mentions of genes in text, such as PubMed/Medline abstracts, and disambiguate them to remove false positives and map them to the correct entry in the NCBI Entrez Gene database by gene ID. March 2017: We started to upload GNAT output on Medline. See files/results/medline/.
    Downloads: 0 This Week
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  • 24
    FUMOLA - Functional Mock-up Laboratory

    FUMOLA - Functional Mock-up Laboratory

    An FMI-based co-simulation framework.

    ...FUMOLA is developed on top of the Ptolemy II framework (https://ptolemy.eecs.berkeley.edu) and the FMI++ library (http://fmipp.sourceforge.net). The online documentation of FUMOLA is available here: https://sourceforge.net/p/fumola/wiki/Home/
    Downloads: 0 This Week
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  • 25
    CRUSH

    CRUSH

    Data reduction and imaging for select astronomical cameras

    CRUSH is a pioneering reduction and imaging suite for many astronomical cameras operating at far-infrared, submillimeter and millimeter wavelengths, such as SHARC-2, SCUBA-2, LABOCA, GISMO, or SOFIA/HAWC+ (to name a few).
    Downloads: 0 This Week
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