Showing 654 open source projects for "squashfs-tool"

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  • 1
    openCDT

    openCDT

    openCDT is a conceptual design tool for aircraft design

    Downloads: 1 This Week
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  • 2

    TUIT

    Taxonomic Unit Identification Tool

    ...A new field has been added to the properties.xml, please make sure to update it to contain <OutputFormat format="tuit"/> or <OutputFormat format="rdp"/> in the <BLASTNParameters> section. Read our paper in Biotechniques: http://www.ncbi.nlm.nih.gov/pubmed/24502797 Taxonomic Unit Identification Tool (TUIT) is a free open source platform-independent software, designed specifically to facilitate taxonomic annotation of nucleotide sequences via BLAST homology search against the NCBI databases. TUIT is immediately applicable for both to 16S microboime studies as well as for taxonomic classification of the nucleotide reads. Please see the project's Wiki page.
    Downloads: 0 This Week
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  • 3

    HomSI

    Homozygous Stretch Identifier from next-generation sequencing data

    ...Recently, the advent of next generation sequencing enables the concurrent identification of homozygous regions and the detection of mutations relevant for diagnosis, using data from a single sequencing experiment. In this respect, we have developed a novel tool that identifies homozygous regions using deep sequence data. Using *.vcf files as an input file, our program identifies the majo
    Downloads: 2 This Week
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  • 4
    Java class libraries for structural biology development: includes protein format conversion tool, printf-based text formatting, Pred2ary secondary structure prediction, neural net library, Hooke-Jeeves global optimizer, and misc. math & statistics.
    Downloads: 0 This Week
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    Streamline Azure Security with Palo Alto Networks VM-Series

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  • 5

    Belief Merger

    A simple Belief Merging Prototype

    ...The goal is to produce a single consistent set of information, trying to keep the most of the information of the sources. A belief merging operator is the responsible for making the belief merging. With this tool you can compare the ΔΣ, ΔGMax and the Δps (PS-Merge) operators.
    Downloads: 0 This Week
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  • 6
    ALTER is a web-based tool to transform between multiple sequence alignment formats. ALTER focuses on the specifications of mainstream alignment and analysis programs rather than on the conversion among more or less specific formats.
    Downloads: 0 This Week
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  • 7

    grepp

    An ultimate text-analysing tool

    A command line tool for text file analyis, filtering, splitting and reporting. Runs under Java (1.5+), supports plugins written in Groovy. Has nix and win batch files in distributions.
    Downloads: 0 This Week
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  • 8
    Biogranat (Molecular Biology Graph Visualisation and Analysis Tool) is a new tool for the analysis and visualisation of large datasets.
    Downloads: 0 This Week
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  • 9
    CatMDEdit - metadata editor
    CatMDEdit is a metadata editor tool for describing resources, mainly geographic information. Developed by IAAA (University of Zaragoza) and GeoSpatiumLab S.L., sponsored by IGN Spain. Technical details: Java, XML, multiplatform, multilingual.
    Downloads: 16 This Week
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  • 10
    BMF

    BMF

    Bio Medical Framework (BMF)

    The BMF is a Software Framework developed in Java language for the creation of web applications on the server platform also Open source, in clinical, administrative and management for a healthcare company.
    Downloads: 2 This Week
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  • 11
    A collection of projects I have developed in the past years. It contains: - a tool to compute height and angle of objects above horizon - a proof of concept of DFT and DWT to reduce audio files - a quantitative library with OOorg interface for Calc
    Downloads: 0 This Week
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  • 12

    JUnit Execution & Report Generation Tool

    Runs JUnit Test cases and generate HTML report, keeps past run history

    This tool pulls all JUnit testcases from the class path and run them all. After completion of test case execution it populates the result in database tables. A report tool fetch the result data from database and produce an HTML report. Highlights of this tool - No coding effort is required from developer to integrate existing JUnit test cases.
    Downloads: 0 This Week
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  • 13

    Autodrive

    Drives your automation lifecircle gathering information, test & deploy

    Autodrive is written to automate tasks within a large soa installation, ranging from gathering information to a metadata repository, over testing software solutions, and deploying prebuild software artifacts.
    Downloads: 0 This Week
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  • 14
    GenoCAD
    GenoCAD is a CAD software for synthetic biology. This application provides a web-based tool to design plasmids, artificial gene networks, and other synthetic genetic systems composed of standard genetic parts. It includes a parts management system, a rule-based design tool, and a simulation engine. This project has morphed into a SaaS model. The open source code is no longer maintained.
    Downloads: 0 This Week
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  • 15
    CIG-P

    CIG-P

    CIG-P is a simple yet flexible data visualization tool

    ...Publication: CIG-P: Cicular Interaction Graph for Proteomics http://www.biomedcentral.com/1471-2105/15/344/ Previously known as PIVOT (Protein Interaction Visualization and Observation Tool)
    Downloads: 0 This Week
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  • 16
    The National Library of New Zealand's Metadata Extraction Tool automatically extracts preservation-related metadata from digital files, then output that metadata in XML formats. It can be used through a graphical user interface or command-line interface. Please take the latest code from 'https://github.com/DIA-NZ/Metadata-Extraction-Tool.git'. The code on source forge will not be updated henceforth as it is moved to github.
    Downloads: 11 This Week
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  • 17

    Khawas

    An Arabic Corpora Processing Tool

    The new version is available at https://sourceforge.net/projects/ghawwasv4/
    Downloads: 0 This Week
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  • 18

    openhealthpractice

    A simulation environment for physiology models simulation

    ...Results can also be exported to different formats (xls, txt or csv). This simulation environment is built using Spring Framework and Java technologies. For more information on how to deploy and use the tool, check the installation and user manuals. This tool was developed within the Synergy project. You can view our publication about the Simulation Environment here: http://www.translational-medicine.com/content/12/S2/S7 The rest of the publication outcomes of the project can be found here: http://www.translational-medicine.com/supplements/12/S2
    Downloads: 0 This Week
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  • 19
    Matchup

    Matchup

    Bioinformatics tool for universal primers and group-specific probes

    Matchup program can be used to find universal primers and group-specific probes for DNA-based detection methods llike AFLP(Amplification fragment length polymorphism) or Microarray experiment.
    Downloads: 0 This Week
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  • 20
    CryptoDock

    CryptoDock

    CryptoDock is a tool that hosts various crypto. algorithms.

    CryptoDock is free multi-platform application written in Java that hosts various hash and modern cryptographic algorithms you can use to protect your sensitive data on your computer. Available cryptographic algorithms: 1. NLSE-1 2. One Time Pad 3. AES Available hashing algorithms: 1. MD5 2. SHA-1 3. SHA-256 4. SHA-512 IMPORTANT: In order to run CryptoDock you need to have Java installed on your computer. Java is free and can be downloaded from - http://www.java.com/
    Downloads: 0 This Week
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  • 21

    IQuant

    A pipeline for quantitative proteomics based upon isobaric tags

    IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by iTRAQ-8plex for testing and a user's manual. ...
    Downloads: 0 This Week
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  • 22
    LARS
    LARS (Lightning Assessment of Risk for a Structure). LARS is a simple tool for the lightning assessment of risk for a structure, according to standard IEC 62305-2, second edition.
    Downloads: 15 This Week
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  • 23
    Graphical Grammar Studio

    Graphical Grammar Studio

    An user friendly grammar tool for natural language processing tasks

    Full documentation with tutorials is included in the download package. Graphical Grammar Studio is a tool for applying grammars which behave as words acceptors/consumers and annotators. GGS grammars can be used to find and annotate sequences of words which respect certain conditions, in a given input. Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited and applied. ...
    Downloads: 0 This Week
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  • 24
    TrafficModeller is an open-source, graphical user interface (GUI) tool for the rapid high-level modeling and generation of vehicular traffic. TrafficModeler supports a variety of traffic definition models representing a wide range of traffic patterns
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    Downloads: 0 This Week
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  • 25
    JBernstein

    JBernstein

    JBernstein: Exploration techniques for non-linear constraint checking

    JBernstein is a tool implemented in Java that enables to check whether a polynomial constraint holds for all variables within their domain. It is mainly used in the verification or synthesis of cyber-physical systems where the system model is nonlinear. The tool also supports specifications in assume-guarantee style. The underlying algorithm is based on a translation to Bernstein polynomials, and several optimization techniques are implemented to ensure efficiency. ...
    Downloads: 0 This Week
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