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A wrapper for Apache UIMA (http://incubator.apache.org/uima/) that connects to the Open Biomedical Annotator (OBA) rest service from the National Center for Biomedical Ontology (http://www.bioontology.org/wiki/index.php/Annotator_User_Guide).
ECL is a system-level specification language for HW/SW designs and is based on Esterel and C.
The ECL compiler parses ECL, writes Esterel and C, and uses the Esterel compiler to produce an implementation.
Originally developed at Cadence Berkeley Labs.
ORE (Ontology Rule Editor) is a platform-independent application to manage
the use of inference rules defined on a model represented by an ontology. ORE offers a easy, well-guided and intiutive GUI to define and test these inference rules.
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Atomic Transformation Code is an EPL-licensed low-level model transformation language implemented upon the Eclipse EMF project. It is an intermediate layer created with the goal of executing any model transformation language, such as QVT, or RubyTL.
MediaWikiRevisionsExtractor extracts the history of a particular wiki page, computes the modifications made between each revisions and finally, stores the whole set of modifications in a file.
RssGsc (Rank Sum Statistics for Gene Set Collections) is a bioinformatics tool used to find meaningful gene sets using a ranked list of genes (obtained form an experiment).
Knime (http://www.knime.org) nodes for sequence bioinformatics. Sequime is an eclipse plug-in for the KNIME data mining platform, providing additional nodes for reading, processing and visualizing sequence information.
This is an IDE for 8051 which can be used to write and simulate assembly language program and find out errors if any. The project implements almost all 8051 functions. It visually shows the content of all register and memory.
GenoGUARD is a DNA sequence screening software that implements the best match method recommended by the federal government to detect the presence of biosecurity threats in synthetic DNA orders.
Josceleton is a Java library providing access to the Microsoft Kinect. It allows you interact with multiple users by either looking at their raw coordinates of several joints, or simply use the pre-built detectors for certain gestures and posi
Java ILP is a simple java interface to (mixed) integer linear programming solvers such as lp_solve, Glpk, Gurobi, SAT4J (0-1 ILP), MiniSat+(0-1 ILP), CPLEX, or Mosek. (documentation at http://javailp.sourceforge.net/)
A prototype input method for OCZ's NIA headset allows full text entry. It is based on Morse Code (3 keystrokes generated from the NIA software) and can produce full English text with all ASCII symbols, uppercase and lowercase.