Search Results for "knime"

... accessible ubiquitously from Your favorite smartphones, tablets, e.g., iPad, SurfacePro, Amazon Fire tablet, Chrome PC, Desktop PC, etc. (Hmmm! in theory, if you can read tiny screens, you can even use your Apple iWatch to use KNIME, Eclipse Photon, IntelliJ, etc. as long as it can display HTML-5 Web Browsers.

Adele was developed to simplify the daily work with data. Use it as a swiss knife to fill the gap between your work with spreadsheet application like MS Excel and enterprise servers like SAP ERP. Specialized tools like Rapid Miner, KNIME or similiary stuff should not be replaced. But Adele is designed for business people working with spreadsheet applications to analyse their data. There are many technical concepts in an easier way included. For example realtime OLAP, transformations...

PMM-Lab is an open-source extension to the Konstanz Information Miner (KNIME). It consists of three components: • a library of KNIME nodes (called PMM-Lab), • a library of “standard” workflows • an HSQL database.to store experimental data and microbial models. Altogether these components are designed to ease and standardize the statistical analysis of experimental microbial data and the development of predictive microbial models (PMM). Users can apply PMM-Lab to proprietary or public data...

FoodProcess-Lab is an open-source extension to the Konstanz Information Miner (KNIME) and PMM-Lab. The purpose of this tool is to combine predictive microbial models with processes of the food and feed industries (e.g. breweries, dairy factories). This tool tracks the steps of a “food process-chain” to trace the growth or inactivation of microbial contaminants. Its intention is to help the food- and feed industry to monitor microbial development in production processes and public...

jdbc4sapnw is a read-only jdbc driver for SAP NetWeaver ABAP stack systems. The driver uses the SAP Java Connector 3 (sapjco3) middleware to call the SAP system. There are no extensions required at the SAP systems by default. Only available remote functions will be used to extract data from sap (RFC technology). A valid SAP user is required for logon. The major goal for this project is to provide SAP data to other java based tools in a direct way (e.g. DB Visualizer, KNIME...

... by similarities of genomes. It has superior performance over existing methods. You can find the accompanying paper here: http://nar.oxfordjournals.org/content/41/1/e10.short Thanks to the great work of the SeqAn team, you can now use GASiC as a Knime workflow: https://github.com/seqan/knime_seqan_workflows/tree/master/metagenomics_gasic_workflow

bictools - a python package to perform variant detection on proteomic MS data using BICEPS (Renard et al. 2012). This repository contains a convenient KNIME workflow to perform the analysis of MS data via OpenMS and a python package (bictools) to handle results from the peptide identification from BICEPs. The combination of both utilities allows to execute the proteomic variant detection workflow. See the wiki page for detailed information and a tutorial.

K-Surfer is a novel and unique software plugin for KNIME for the management and analysis of FreeSurfer brain dMRI data. K-Surfer consists of a suite of KNIME nodes that perform several tasks, such as importing diffusion data generated from TRACULA, importing morphological measures obtained from the segmentation and reconstruction of neuroimages and visualising the probability distribution of white matter pathways. For installation guide read the pdf inside the zip. References: Sarica...

Diversity assessments and comparisons of large compound databases require calculating similarities of millions of compounds in an affordable time. ParaSim addresses this challenge by parallelizing the calculations according to the number of computing cores available on a single machine. It is optimized for the throughput of very large numbers of query structures against very large numbers of reference structures. As as special feature, ParaSim allows to store and and to access frequently...

Project aims at developing KNIME nodes, which provide tools for solving optimization problems, like TSP and function optimization. Two metaheuristic are available: Tabu Search and Simulated Annealing. Now we are working on: Evolutionary Algorithm.

Knime (http://www.knime.org) nodes for sequence bioinformatics. Sequime is an eclipse plug-in for the KNIME data mining platform, providing additional nodes for reading, processing and visualizing sequence information.

In this project, we want to give a user-friendly implementation of the ensemble methodology through the deployment of some nodes for the KNIME environment.